RNA–Protein interactions for RNA: YMR047C

NUP116, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP116, Length 3,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP116YMR047C ECM16Q04217 1267 aaKnown RBP5.75□□□□□ -1.49
NUP116YMR047C YLR225CQ05948 407 aaKnown RBP5.75□□□□□ -1.49
NUP116YMR047C PDR18P53756 1333 aa5.75□□□□□ -1.49
NUP116YMR047C IME2P32581 645 aa5.74□□□□□ -1.49
NUP116YMR047C MLC1P53141 149 aa5.74□□□□□ -1.49
NUP116YMR047C ISW1P38144 1129 aa5.74□□□□□ -1.49
NUP116YMR047C KEL1P38853 1164 aaKnown RBP5.74□□□□□ -1.49
NUP116YMR047C SKG3Q06315 1026 aa5.74□□□□□ -1.49
NUP116YMR047C GIN4Q12263 1142 aa5.74□□□□□ -1.49
NUP116YMR047C NCB2Q92317 146 aa5.74□□□□□ -1.49
NUP116YMR047C ERG7P38604 731 aa5.74□□□□□ -1.49
NUP116YMR047C TIF4631P39935 952 aaKnown RBP5.74□□□□□ -1.49
NUP116YMR047C MCM1P11746 286 aa5.73□□□□□ -1.49
NUP116YMR047C OCT1P35999 772 aa5.73□□□□□ -1.49
NUP116YMR047C YGL242CP53066 181 aa5.73□□□□□ -1.49
NUP116YMR047C YAF9P53930 226 aa5.73□□□□□ -1.49
NUP116YMR047C KAR5Q04746 504 aa5.73□□□□□ -1.49
NUP116YMR047C TUS1Q06412 1307 aa5.73□□□□□ -1.49
NUP116YMR047C OPI1P21957 404 aa5.73□□□□□ -1.49
NUP116YMR047C PRS1P32895 427 aaKnown RBP5.73□□□□□ -1.49
NUP116YMR047C BOI1P38041 980 aaKnown RBP5.73□□□□□ -1.49
NUP116YMR047C YNG2P38806 282 aaKnown RBP5.73□□□□□ -1.49
NUP116YMR047C VAB2P40003 282 aa5.73□□□□□ -1.49
NUP116YMR047C NMD2P38798 1089 aaKnown RBP5.73□□□□□ -1.49
NUP116YMR047C LYS14P40971 790 aa5.73□□□□□ -1.49
NUP116YMR047C YGR122WP53272 402 aa5.73□□□□□ -1.49
NUP116YMR047C SUB2Q07478 446 aaKnown RBP5.73□□□□□ -1.49
NUP116YMR047C TY1B-AO13527 1196 aaKnown RBP5.72□□□□□ -1.49
NUP116YMR047C HSP82P02829 709 aaKnown RBP5.72□□□□□ -1.49
NUP116YMR047C MSH3P25336 1018 aa5.72□□□□□ -1.49
NUP116YMR047C MXR1P40029 184 aa5.72□□□□□ -1.49
NUP116YMR047C HXT10P43581 546 aa5.72□□□□□ -1.49
NUP116YMR047C SDH2P21801 266 aa5.71□□□□□ -1.49
NUP116YMR047C ADP1P25371 1049 aa5.71□□□□□ -1.49
NUP116YMR047C TIM23P32897 222 aa5.71□□□□□ -1.49
NUP116YMR047C PTK1P36002 662 aaPredicted RBP5.71□□□□□ -1.49
NUP116YMR047C RAD26P40352 1085 aa5.71□□□□□ -1.49
NUP116YMR047C PIP2P52960 996 aa5.71□□□□□ -1.49
NUP116YMR047C ERG12P07277 443 aa5.71□□□□□ -1.5
NUP116YMR047C TPO2P53283 614 aa5.71□□□□□ -1.5
NUP116YMR047C PMA1P05030 918 aaKnown RBP5.71□□□□□ -1.5
NUP116YMR047C ASH1P34233 588 aa5.71□□□□□ -1.5
NUP116YMR047C WHI3P34761 661 aaKnown RBP5.71□□□□□ -1.5
NUP116YMR047C MAC1P35192 417 aa5.71□□□□□ -1.5
NUP116YMR047C SOL4P53315 255 aa5.71□□□□□ -1.5
NUP116YMR047C SEN54Q02825 467 aaPredicted RBP5.71□□□□□ -1.5
NUP116YMR047C FMP30Q02883 468 aa5.71□□□□□ -1.5
NUP116YMR047C TLG1Q03322 224 aa5.71□□□□□ -1.5
NUP116YMR047C CLF1Q12309 687 aaPredicted RBP5.71□□□□□ -1.5
NUP116YMR047C SWC3P31376 625 aa5.7□□□□□ -1.5
NUP116YMR047C EPS1P40557 701 aa5.7□□□□□ -1.5
NUP116YMR047C ICL2Q12031 575 aa5.7□□□□□ -1.5
NUP116YMR047C CDC60P26637 1090 aaKnown RBP5.7□□□□□ -1.5
NUP116YMR047C CST26P38226 397 aa5.7□□□□□ -1.5
NUP116YMR047C INM2Q05533 292 aa5.7□□□□□ -1.5
NUP116YMR047C YFL040WP43562 540 aa5.69□□□□□ -1.5
NUP116YMR047C BBC1P47068 1157 aa5.69□□□□□ -1.5
NUP116YMR047C ECM30Q06673 1274 aa5.69□□□□□ -1.5
NUP116YMR047C PFK2P16862 959 aaKnown RBP RIP-Chip data5.69□□□□□ -1.5not detected
NUP116YMR047C RPS0AP32905 252 aaKnown RBP5.69□□□□□ -1.5
NUP116YMR047C SEC9P40357 651 aa5.69□□□□□ -1.5
NUP116YMR047C EAR1Q03212 550 aa5.69□□□□□ -1.5
NUP116YMR047C TAH18Q12181 623 aa5.69□□□□□ -1.5
NUP116YMR047C SEC20P28791 383 aa5.69□□□□□ -1.5
NUP116YMR047C YKR018CP36114 725 aa5.69□□□□□ -1.5
NUP116YMR047C RRI2Q12348 645 aa5.69□□□□□ -1.5
NUP116YMR047C ECM21P38167 1117 aaKnown RBP5.68□□□□□ -1.5
NUP116YMR047C GPB2P39717 880 aa5.68□□□□□ -1.5
NUP116YMR047C PIL1P53252 339 aaKnown RBP5.68□□□□□ -1.5
NUP116YMR047C YNL193WP53870 558 aa5.68□□□□□ -1.5
NUP116YMR047C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.68□□□□□ -1.5not detected
NUP116YMR047C PKC1P24583 1151 aa5.68□□□□□ -1.5
NUP116YMR047C KTR3P38130 404 aaPredicted RBP5.68□□□□□ -1.5
NUP116YMR047C RTS1P38903 757 aa5.68□□□□□ -1.5
NUP116YMR047C PKH3Q03306 898 aaPredicted RBP5.68□□□□□ -1.5
NUP116YMR047C BRE1Q07457 700 aaKnown RBP5.68□□□□□ -1.5
NUP116YMR047C CFT2Q12102 859 aaPredicted RBP5.68□□□□□ -1.5
NUP116YMR047C PNT1P38969 423 aa5.68□□□□□ -1.5
NUP116YMR047C GSM1P42950 618 aa5.68□□□□□ -1.5
NUP116YMR047C NNF2P53253 936 aa5.68□□□□□ -1.5
NUP116YMR047C RPN7Q06103 429 aaKnown RBP5.68□□□□□ -1.5
NUP116YMR047C NOT3P06102 836 aaKnown RBP5.67□□□□□ -1.5
NUP116YMR047C PRE8P23639 250 aa5.67□□□□□ -1.5
NUP116YMR047C SIC1P38634 284 aa5.67□□□□□ -1.5
NUP116YMR047C ACA1P39970 489 aa5.67□□□□□ -1.5
NUP116YMR047C ENP2P48234 707 aaKnown RBP5.67□□□□□ -1.5
NUP116YMR047C GUD1Q07729 489 aa5.67□□□□□ -1.5
NUP116YMR047C RAD61Q99359 647 aa5.67□□□□□ -1.5
NUP116YMR047C MYO1P08964 1928 aa5.67□□□□□ -1.5
NUP116YMR047C POL32P47110 350 aa5.67□□□□□ -1.5
NUP116YMR047C SRM1P21827 482 aa5.66□□□□□ -1.5
NUP116YMR047C GRX7P38068 203 aa5.66□□□□□ -1.5
NUP116YMR047C IRC8P47046 822 aa5.66□□□□□ -1.5
NUP116YMR047C SPO1P53541 631 aa5.66□□□□□ -1.5
NUP116YMR047C YSH1Q06224 779 aaPredicted RBP5.66□□□□□ -1.5
NUP116YMR047C PLP2Q12017 286 aa5.66□□□□□ -1.5
NUP116YMR047C RAD50P12753 1312 aa5.66□□□□□ -1.5
NUP116YMR047C ECM29P38737 1868 aa5.66□□□□□ -1.5
NUP116YMR047C LAM4P38800 1345 aa5.66□□□□□ -1.5
NUP116YMR047C RRP14P36080 434 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 1151.5 ms