RNA–Protein interactions for RNA: YLR451W

LEU3, Transcript of Zinc-knuckle transcription factor, repressor and activator, yeast

Gene LEU3, Length 2,661 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LEU3	YLR451W	ALD6	P54115	500 aa	Known RBP	3.67	□□□□□ -1.82
LEU3	YLR451W	YTA7	P40340	1379 aa		3.67	□□□□□ -1.82
LEU3	YLR451W	PRE9	P23638	258 aa	Known RBP	3.67	□□□□□ -1.82
LEU3	YLR451W	MRPL16	P38064	232 aa		3.67	□□□□□ -1.82
LEU3	YLR451W	LSC2	P53312	427 aa		3.67	□□□□□ -1.82
LEU3	YLR451W	ULP1	Q02724	621 aa		3.67	□□□□□ -1.82
LEU3	YLR451W	DAL4	Q04895	635 aa		3.67	□□□□□ -1.82
LEU3	YLR451W	YCS4	Q06156	1176 aa		3.67	□□□□□ -1.82
LEU3	YLR451W	HXT13	P39924	564 aa		3.67	□□□□□ -1.82
LEU3	YLR451W	HXT17	P53631	564 aa		3.67	□□□□□ -1.82
LEU3	YLR451W	HXT15	P54854	567 aa		3.67	□□□□□ -1.82
LEU3	YLR451W	RMD1	Q03441	430 aa		3.67	□□□□□ -1.82
LEU3	YLR451W	AIM46	P38885	310 aa		3.66	□□□□□ -1.82
LEU3	YLR451W	VAC8	P39968	578 aa		3.66	□□□□□ -1.82
LEU3	YLR451W	YGR053C	P53234	283 aa		3.66	□□□□□ -1.82
LEU3	YLR451W	TRK1	P12685	1235 aa		3.66	□□□□□ -1.82
LEU3	YLR451W	GCR1	P07261	785 aa		3.65	□□□□□ -1.82
LEU3	YLR451W	YKL069W	P36088	180 aa		3.65	□□□□□ -1.82
LEU3	YLR451W	CIC1	P38779	376 aa	Known RBP	3.65	□□□□□ -1.82
LEU3	YLR451W	NPR1	P22211	790 aa		3.65	□□□□□ -1.83
LEU3	YLR451W	GLY1	P37303	387 aa	Known RBP	3.65	□□□□□ -1.83
LEU3	YLR451W	RDH54	P38086	958 aa		3.65	□□□□□ -1.83
LEU3	YLR451W	YHL008C	P38750	627 aa		3.65	□□□□□ -1.83
LEU3	YLR451W	RGA1	P39083	1007 aa		3.65	□□□□□ -1.83
LEU3	YLR451W	FIR1	P40020	876 aa		3.65	□□□□□ -1.83
LEU3	YLR451W	FAA4	P47912	694 aa	Known RBP	3.65	□□□□□ -1.83
LEU3	YLR451W	MON1	P53129	644 aa		3.65	□□□□□ -1.83
LEU3	YLR451W	EEB1	Q02891	456 aa		3.65	□□□□□ -1.83
LEU3	YLR451W	GLO4	Q12320	285 aa		3.65	□□□□□ -1.83
LEU3	YLR451W	NOG1	Q02892	647 aa	Known RBP	3.64	□□□□□ -1.83
LEU3	YLR451W	ADI1	Q03677	179 aa		3.64	□□□□□ -1.83
LEU3	YLR451W	TY1A-MR1	Q04215	440 aa		3.64	□□□□□ -1.83
LEU3	YLR451W	ESF1	Q06344	628 aa	Known RBP	3.64	□□□□□ -1.83
LEU3	YLR451W	REC8	Q12188	680 aa		3.64	□□□□□ -1.83
LEU3	YLR451W	CDC34	P14682	295 aa		3.64	□□□□□ -1.83
LEU3	YLR451W	BIO5	P53744	561 aa	Known RBP	3.64	□□□□□ -1.83
LEU3	YLR451W	CUZ1	P53899	274 aa		3.64	□□□□□ -1.83
LEU3	YLR451W	BUD6	P41697	788 aa		3.63	□□□□□ -1.83
LEU3	YLR451W	YAF9	P53930	226 aa		3.63	□□□□□ -1.83
LEU3	YLR451W	MET22	P32179	357 aa		3.63	□□□□□ -1.83
LEU3	YLR451W	YTA6	P40328	754 aa		3.63	□□□□□ -1.83
LEU3	YLR451W	INP51	P40559	946 aa	Known RBP	3.63	□□□□□ -1.83
LEU3	YLR451W	BRE2	P43132	505 aa		3.63	□□□□□ -1.83
LEU3	YLR451W	ROG3	P43602	733 aa		3.63	□□□□□ -1.83
LEU3	YLR451W	YNR065C	P53751	1116 aa		3.63	□□□□□ -1.83
LEU3	YLR451W	SRF1	Q12516	437 aa		3.63	□□□□□ -1.83
LEU3	YLR451W	TY1A-LR4	P0C2I8	440 aa	Known RBP	3.62	□□□□□ -1.83
LEU3	YLR451W	TY1A-DR6	P0CX70	440 aa		3.62	□□□□□ -1.83
LEU3	YLR451W	TY1A-ER1	P0CX71	440 aa		3.62	□□□□□ -1.83
LEU3	YLR451W	TY1A-LR2	P0CX72	440 aa		3.62	□□□□□ -1.83
LEU3	YLR451W	TY1A-PL	P0CX73	440 aa		3.62	□□□□□ -1.83
LEU3	YLR451W	TY1A-JR1	P0CX74	440 aa		3.62	□□□□□ -1.83
LEU3	YLR451W	TY1A-LR3	P0CX75	440 aa		3.62	□□□□□ -1.83
LEU3	YLR451W	TY1A-ML2	P0CX76	440 aa		3.62	□□□□□ -1.83
LEU3	YLR451W	FUS1	P11710	512 aa		3.62	□□□□□ -1.83
LEU3	YLR451W	DIT1	P21623	536 aa		3.62	□□□□□ -1.83
LEU3	YLR451W	MNR2	P35724	969 aa		3.62	□□□□□ -1.83
LEU3	YLR451W	EXO5	P38289	585 aa		3.62	□□□□□ -1.83
LEU3	YLR451W	PRK1	P40494	810 aa		3.62	□□□□□ -1.83
LEU3	YLR451W	PPT1	P53043	513 aa		3.62	□□□□□ -1.83
LEU3	YLR451W	UBP2	Q01476	1272 aa		3.62	□□□□□ -1.83
LEU3	YLR451W	YDL176W	Q12027	708 aa		3.62	□□□□□ -1.83
LEU3	YLR451W	TY1A-GR1	Q12085	440 aa		3.62	□□□□□ -1.83
LEU3	YLR451W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	3.62	□□□□□ -1.83
LEU3	YLR451W	TY1A-OL	Q92392	440 aa	Known RBP	3.62	□□□□□ -1.83
LEU3	YLR451W	SEC23	P15303	768 aa	Known RBP	3.62	□□□□□ -1.83
LEU3	YLR451W	YGL140C	P53120	1219 aa		3.62	□□□□□ -1.83
LEU3	YLR451W	TY1A-DR2	Q03964	440 aa	Known RBP	3.62	□□□□□ -1.83
LEU3	YLR451W	LCB5	Q06147	687 aa	Known RBP	3.62	□□□□□ -1.83
LEU3	YLR451W	HDA2	Q06629	674 aa		3.62	□□□□□ -1.83
LEU3	YLR451W	STE5	P32917	917 aa		3.61	□□□□□ -1.83
LEU3	YLR451W	PET112	P33893	541 aa		3.61	□□□□□ -1.83
LEU3	YLR451W	SYT1	Q06836	1226 aa		3.61	□□□□□ -1.83
LEU3	YLR451W	PPM2	Q08282	695 aa		3.61	□□□□□ -1.83
LEU3	YLR451W	OXR1	Q08952	273 aa		3.61	□□□□□ -1.83
LEU3	YLR451W	MCD1	Q12158	566 aa		3.61	□□□□□ -1.83
LEU3	YLR451W	YHR020W	P38708	688 aa	Known RBP	3.61	□□□□□ -1.83
LEU3	YLR451W	ACO2	P39533	789 aa		3.61	□□□□□ -1.83
LEU3	YLR451W	RVS167	P39743	482 aa	Known RBP	3.61	□□□□□ -1.83
LEU3	YLR451W	YOL098C	Q12496	1037 aa		3.61	□□□□□ -1.83
LEU3	YLR451W	YIR007W	P40566	764 aa		3.6	□□□□□ -1.83
LEU3	YLR451W	YJR124C	P47159	448 aa		3.6	□□□□□ -1.83
LEU3	YLR451W	LYS5	P50113	272 aa		3.6	□□□□□ -1.83
LEU3	YLR451W	PEP7	P32609	515 aa		3.6	□□□□□ -1.83
LEU3	YLR451W	MRPS18	P42847	217 aa		3.6	□□□□□ -1.83
LEU3	YLR451W	ESC2	Q06340	456 aa		3.6	□□□□□ -1.83
LEU3	YLR451W	CIT2	P08679	460 aa		3.59	□□□□□ -1.83
LEU3	YLR451W	MSH3	P25336	1018 aa		3.59	□□□□□ -1.83
LEU3	YLR451W	NCL1	P38205	684 aa	Known RBP	3.59	□□□□□ -1.83
LEU3	YLR451W	NNF1	P47149	201 aa		3.59	□□□□□ -1.83
LEU3	YLR451W	SOG2	Q08817	791 aa		3.59	□□□□□ -1.83
LEU3	YLR451W	YDR461C-A	Q2V2P7	80 aa		3.59	□□□□□ -1.83
LEU3	YLR451W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	3.59	□□□□□ -1.83	not detected
LEU3	YLR451W	GRX1	P25373	110 aa	Known RBP	3.59	□□□□□ -1.83
LEU3	YLR451W	SEA4	P38164	1038 aa		3.59	□□□□□ -1.83
LEU3	YLR451W	XKS1	P42826	600 aa		3.59	□□□□□ -1.83
LEU3	YLR451W	SCW11	P53189	542 aa		3.59	□□□□□ -1.83
LEU3	YLR451W	BDF2	Q07442	638 aa		3.59	□□□□□ -1.83
LEU3	YLR451W	HTS1	P07263	546 aa	Known RBP	3.58	□□□□□ -1.84
LEU3	YLR451W	PEX28	P38848	579 aa		3.58	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms