RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C ECM23Q02710 187 aa6.32□□□□□ -1.4
CMS1YLR003C MSN1P22148 382 aa6.31□□□□□ -1.4
CMS1YLR003C TGL4P36165 910 aa6.31□□□□□ -1.4
CMS1YLR003C YBR287WP38355 427 aa6.31□□□□□ -1.4
CMS1YLR003C NIT1P40447 199 aa6.31□□□□□ -1.4
CMS1YLR003C LRG1P35688 1017 aa6.3□□□□□ -1.4
CMS1YLR003C ECL1P48235 211 aa6.3□□□□□ -1.4
CMS1YLR003C SPO71Q03868 1245 aa6.3□□□□□ -1.4
CMS1YLR003C EMG1Q06287 252 aaKnown RBP6.3□□□□□ -1.4
CMS1YLR003C TFA2P36145 328 aa6.29□□□□□ -1.4
CMS1YLR003C GIC2Q06648 383 aa6.29□□□□□ -1.4
CMS1YLR003C ELG1Q12050 791 aa6.29□□□□□ -1.4
CMS1YLR003C ISC10P32645 267 aa6.28□□□□□ -1.4
CMS1YLR003C POL12P38121 705 aaPredicted RBP6.28□□□□□ -1.4
CMS1YLR003C ALD3P54114 506 aa6.28□□□□□ -1.4
CMS1YLR003C FUS1P11710 512 aa6.27□□□□□ -1.41
CMS1YLR003C YCR015CP25616 317 aa6.27□□□□□ -1.41
CMS1YLR003C UBX7P38349 436 aa6.27□□□□□ -1.41
CMS1YLR003C ALD4P46367 519 aaKnown RBP6.27□□□□□ -1.41
CMS1YLR003C GCD1P09032 578 aaPredicted RBP6.26□□□□□ -1.41
CMS1YLR003C YKL222CP35995 705 aa6.26□□□□□ -1.41
CMS1YLR003C FIR1P40020 876 aa6.26□□□□□ -1.41
CMS1YLR003C DFG16Q99234 619 aa6.26□□□□□ -1.41
CMS1YLR003C AIM46P38885 310 aa6.25□□□□□ -1.41
CMS1YLR003C ERS1P17261 260 aa6.24□□□□□ -1.41
CMS1YLR003C KIP3P53086 805 aaKnown RBP6.24□□□□□ -1.41
CMS1YLR003C PRP43P53131 767 aaKnown RBP6.24□□□□□ -1.41
CMS1YLR003C BOI1P38041 980 aaKnown RBP6.23□□□□□ -1.41
CMS1YLR003C NEO1P40527 1151 aa6.23□□□□□ -1.41
CMS1YLR003C TTI1P36097 1038 aa6.22□□□□□ -1.41
CMS1YLR003C HXT8P40886 569 aa6.22□□□□□ -1.41
CMS1YLR003C NSI1Q12457 570 aa6.22□□□□□ -1.41
CMS1YLR003C GAS1P22146 559 aaKnown RBP6.21□□□□□ -1.42
CMS1YLR003C MMM1P41800 426 aa6.2□□□□□ -1.42
CMS1YLR003C YNR065CP53751 1116 aa6.2□□□□□ -1.42
CMS1YLR003C FAR11P53917 953 aa6.2□□□□□ -1.42
CMS1YLR003C PUF6Q04373 656 aaKnown RBP6.2□□□□□ -1.42
CMS1YLR003C PUN1Q06991 263 aa6.2□□□□□ -1.42
CMS1YLR003C ESC8Q08119 714 aa6.2□□□□□ -1.42
CMS1YLR003C YJR124CP47159 448 aa6.19□□□□□ -1.42
CMS1YLR003C HAS1Q03532 505 aaKnown RBP6.19□□□□□ -1.42
CMS1YLR003C RGD2P43556 714 aa6.18□□□□□ -1.42
CMS1YLR003C CIT3P43635 486 aa6.18□□□□□ -1.42
CMS1YLR003C YHL008CP38750 627 aa6.17□□□□□ -1.42
CMS1YLR003C HVG1P0CE11 249 aa6.16□□□□□ -1.42
CMS1YLR003C WHI3P34761 661 aaKnown RBP6.16□□□□□ -1.42
CMS1YLR003C YOR223WQ12015 292 aa6.16□□□□□ -1.42
CMS1YLR003C SRS2P12954 1174 aa6.15□□□□□ -1.42
CMS1YLR003C NTA1P40354 457 aa6.15□□□□□ -1.42
CMS1YLR003C YOR059CQ08448 450 aaKnown RBP6.15□□□□□ -1.42
CMS1YLR003C CDA2Q06703 312 aa6.14□□□□□ -1.43
CMS1YLR003C GLO4Q12320 285 aa6.14□□□□□ -1.43
CMS1YLR003C HSP78P33416 811 aa6.13□□□□□ -1.43
CMS1YLR003C GPT2P36148 743 aa6.13□□□□□ -1.43
CMS1YLR003C FET4P40988 552 aa6.13□□□□□ -1.43
CMS1YLR003C TAF1P46677 1066 aa6.13□□□□□ -1.43
CMS1YLR003C RCM1P53972 490 aa6.13□□□□□ -1.43
CMS1YLR003C YMR074CQ04773 145 aa6.13□□□□□ -1.43
CMS1YLR003C TSA1P34760 196 aaKnown RBP6.12□□□□□ -1.43
CMS1YLR003C GIP4P39732 760 aa6.12□□□□□ -1.43
CMS1YLR003C SUT1P53032 299 aaKnown RBP6.11□□□□□ -1.43
CMS1YLR003C PUP1P25043 261 aa6.1□□□□□ -1.43
CMS1YLR003C KTR2P33550 425 aa6.1□□□□□ -1.43
CMS1YLR003C YLL054CQ12244 843 aa6.1□□□□□ -1.43
CMS1YLR003C TIF6Q12522 245 aaKnown RBP6.1□□□□□ -1.43
CMS1YLR003C RAD55P38953 406 aa6.09□□□□□ -1.43
CMS1YLR003C APC11Q12157 165 aa6.09□□□□□ -1.43
CMS1YLR003C CPS1P27614 576 aa6.08□□□□□ -1.44
CMS1YLR003C IRS4P36115 615 aaKnown RBP6.08□□□□□ -1.44
CMS1YLR003C OYE3P41816 400 aaPredicted RBP6.08□□□□□ -1.44
CMS1YLR003C DOT1Q04089 582 aaKnown RBP6.08□□□□□ -1.44
CMS1YLR003C PYC2P32327 1180 aaKnown RBP6.07□□□□□ -1.44
CMS1YLR003C RRN6P32786 894 aa6.07□□□□□ -1.44
CMS1YLR003C THI80P35202 319 aa6.07□□□□□ -1.44
CMS1YLR003C PSY2P40164 858 aa6.07□□□□□ -1.44
CMS1YLR003C CWC15Q03772 175 aaKnown RBP6.07□□□□□ -1.44
CMS1YLR003C ADP1P25371 1049 aa6.06□□□□□ -1.44
CMS1YLR003C SMC1P32908 1225 aa6.05□□□□□ -1.44
CMS1YLR003C ORC3P54790 616 aa6.05□□□□□ -1.44
CMS1YLR003C GCV1P48015 400 aa6.04□□□□□ -1.44
CMS1YLR003C GIS1Q03833 894 aa6.04□□□□□ -1.44
CMS1YLR003C PRP6P19735 899 aaPredicted RBP6.03□□□□□ -1.44
CMS1YLR003C RPS4AP0CX35 261 aaKnown RBP6.02□□□□□ -1.45
CMS1YLR003C RPS4BP0CX36 261 aaKnown RBP6.02□□□□□ -1.45
CMS1YLR003C RPB10P22139 70 aa6.02□□□□□ -1.45
CMS1YLR003C MSH6Q03834 1242 aa6.02□□□□□ -1.45
CMS1YLR003C PNP1Q05788 311 aa6.02□□□□□ -1.45
CMS1YLR003C HDA2Q06629 674 aa6.02□□□□□ -1.45
CMS1YLR003C FLR1P38124 548 aa6.01□□□□□ -1.45
CMS1YLR003C SSY1Q03770 852 aa6.01□□□□□ -1.45
CMS1YLR003C TRE1Q08919 783 aa6□□□□□ -1.45
CMS1YLR003C YIG1Q08956 461 aa6□□□□□ -1.45
CMS1YLR003C LSO1Q3E827 93 aa5.99□□□□□ -1.45
CMS1YLR003C ALT1P52893 592 aa5.98□□□□□ -1.45
CMS1YLR003C MSH4P40965 878 aaPredicted RBP5.97□□□□□ -1.45
CMS1YLR003C LPX1Q12405 387 aaKnown RBP5.97□□□□□ -1.45
CMS1YLR003C PEX7P39108 375 aa5.96□□□□□ -1.46
CMS1YLR003C CTR9P89105 1077 aa5.96□□□□□ -1.46
CMS1YLR003C MEC3Q02574 474 aa5.96□□□□□ -1.46
CMS1YLR003C HTS1P07263 546 aaKnown RBP5.95□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms