RNA–Protein interactions for RNA: YKR081C

RPF2, Transcript of Essential protein involved in rRNA maturation and ribosomal assembly, yeastyeast

Gene RPF2, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF2YKR081C KAE1P36132 386 aa7.37□□□□□ -1.23
RPF2YKR081C QDR1P40475 563 aa7.36□□□□□ -1.23
RPF2YKR081C INP51P40559 946 aaKnown RBP7.36□□□□□ -1.23
RPF2YKR081C AIM46P38885 310 aa7.35□□□□□ -1.23
RPF2YKR081C NTA1P40354 457 aa7.35□□□□□ -1.23
RPF2YKR081C EMG1Q06287 252 aaKnown RBP7.35□□□□□ -1.23
RPF2YKR081C PGM1P33401 570 aaKnown RBP7.34□□□□□ -1.23
RPF2YKR081C RGD2P43556 714 aa7.34□□□□□ -1.23
RPF2YKR081C ACF4P47129 309 aa7.34□□□□□ -1.23
RPF2YKR081C INP52P50942 1183 aa7.34□□□□□ -1.23
RPF2YKR081C MED7Q08278 222 aa7.34□□□□□ -1.23
RPF2YKR081C HAT1Q12341 374 aa7.34□□□□□ -1.23
RPF2YKR081C TY1A-NL1Q12391 440 aaKnown RBP7.34□□□□□ -1.23
RPF2YKR081C RAD55P38953 406 aa7.33□□□□□ -1.24
RPF2YKR081C TRL1P09880 827 aaKnown RBP7.32□□□□□ -1.24
RPF2YKR081C CHS2P14180 963 aa7.32□□□□□ -1.24
RPF2YKR081C UFD2P54860 961 aa7.32□□□□□ -1.24
RPF2YKR081C GUP1P53154 560 aa7.31□□□□□ -1.24
RPF2YKR081C YBL113CQ7M4S9 792 aa7.31□□□□□ -1.24
RPF2YKR081C NAM7P30771 971 aaKnown RBP7.3□□□□□ -1.24
RPF2YKR081C IRS4P36115 615 aaKnown RBP7.3□□□□□ -1.24
RPF2YKR081C PAN5P38787 379 aa7.3□□□□□ -1.24
RPF2YKR081C ERP5P38819 212 aa7.3□□□□□ -1.24
RPF2YKR081C AKR1P39010 764 aa7.3□□□□□ -1.24
RPF2YKR081C LEM3P42838 414 aa7.3□□□□□ -1.24
RPF2YKR081C BIO5P53744 561 aaKnown RBP7.3□□□□□ -1.24
RPF2YKR081C YLR122CQ12312 125 aa7.3□□□□□ -1.24
RPF2YKR081C TIF6Q12522 245 aaKnown RBP7.3□□□□□ -1.24
RPF2YKR081C TRP3P00937 484 aa7.29□□□□□ -1.24
RPF2YKR081C GRS1P38088 690 aaKnown RBP7.29□□□□□ -1.24
RPF2YKR081C SAF1P38352 637 aa7.29□□□□□ -1.24
RPF2YKR081C PSY2P40164 858 aa7.29□□□□□ -1.24
RPF2YKR081C LIP5P32875 414 aa7.28□□□□□ -1.24
RPF2YKR081C YGR130CP53278 816 aa7.28□□□□□ -1.24
RPF2YKR081C MDJ2P42834 146 aa7.27□□□□□ -1.25
RPF2YKR081C TRS120Q04183 1289 aa7.27□□□□□ -1.25
RPF2YKR081C FUS1P11710 512 aa7.26□□□□□ -1.25
RPF2YKR081C MAE1P36013 669 aaKnown RBP7.26□□□□□ -1.25
RPF2YKR081C SSF1P38789 453 aaPredicted RBP7.26□□□□□ -1.25
RPF2YKR081C NEO1P40527 1151 aa7.26□□□□□ -1.25
RPF2YKR081C SOG2Q08817 791 aa7.26□□□□□ -1.25
RPF2YKR081C YKR073CP36153 106 aa7.25□□□□□ -1.25
RPF2YKR081C SPO71Q03868 1245 aa7.25□□□□□ -1.25
RPF2YKR081C PUF3Q07807 879 aaKnown RBP RIP-Chip data7.25□□□□□ -1.25not detected
RPF2YKR081C REC8Q12188 680 aa7.25□□□□□ -1.25
RPF2YKR081C TOS1P38288 455 aa7.24□□□□□ -1.25
RPF2YKR081C ALD3P54114 506 aa7.24□□□□□ -1.25
RPF2YKR081C RSC4Q02206 625 aa7.24□□□□□ -1.25
RPF2YKR081C TFA2P36145 328 aa7.23□□□□□ -1.25
RPF2YKR081C POL5P39985 1022 aaKnown RBP7.22□□□□□ -1.25
RPF2YKR081C AVT1P47082 602 aa7.22□□□□□ -1.25
RPF2YKR081C CYC7P00045 113 aa7.21□□□□□ -1.26
RPF2YKR081C YJR124CP47159 448 aa7.21□□□□□ -1.26
RPF2YKR081C YNL011CP53980 444 aa7.21□□□□□ -1.26
RPF2YKR081C NUT2Q06213 157 aa7.21□□□□□ -1.26
RPF2YKR081C MNL2Q12205 849 aa7.21□□□□□ -1.26
RPF2YKR081C IRC24P40580 263 aa7.2□□□□□ -1.26
RPF2YKR081C CDC55Q00362 526 aa7.2□□□□□ -1.26
RPF2YKR081C ELG1Q12050 791 aa7.2□□□□□ -1.26
RPF2YKR081C FRT1Q99332 602 aa7.2□□□□□ -1.26
RPF2YKR081C PYC2P32327 1180 aaKnown RBP7.19□□□□□ -1.26
RPF2YKR081C PUB1P32588 453 aaKnown RBP RIP-Chip data7.19□□□□□ -1.26not detected
RPF2YKR081C STM1P39015 273 aaKnown RBP7.19□□□□□ -1.26
RPF2YKR081C YNR065CP53751 1116 aa7.19□□□□□ -1.26
RPF2YKR081C YHL050CP38721 697 aa7.18□□□□□ -1.26
RPF2YKR081C YHR219WP38900 624 aa7.18□□□□□ -1.26
RPF2YKR081C SPO74P45819 413 aa7.18□□□□□ -1.26
RPF2YKR081C NCE103P53615 221 aa7.18□□□□□ -1.26
RPF2YKR081C BRE4Q07660 1125 aa7.18□□□□□ -1.26
RPF2YKR081C KIP3P53086 805 aaKnown RBP7.17□□□□□ -1.26
RPF2YKR081C BSC2Q05611 235 aa7.17□□□□□ -1.26
RPF2YKR081C FAR11P53917 953 aa7.16□□□□□ -1.26
RPF2YKR081C CTR9P89105 1077 aa7.16□□□□□ -1.26
RPF2YKR081C YMR074CQ04773 145 aa7.16□□□□□ -1.26
RPF2YKR081C GIC2Q06648 383 aa7.16□□□□□ -1.26
RPF2YKR081C ERS1P17261 260 aa7.15□□□□□ -1.26
RPF2YKR081C ECM2P38241 364 aaKnown RBP7.15□□□□□ -1.26
RPF2YKR081C FET4P40988 552 aa7.15□□□□□ -1.26
RPF2YKR081C CTH1P47976 325 aa7.15□□□□□ -1.26
RPF2YKR081C HAS1Q03532 505 aaKnown RBP7.15□□□□□ -1.26
RPF2YKR081C GLO4Q12320 285 aa7.15□□□□□ -1.26
RPF2YKR081C MSB1P21339 1137 aaKnown RBP7.14□□□□□ -1.27
RPF2YKR081C PPX1P38698 397 aa7.14□□□□□ -1.27
RPF2YKR081C GPI13Q07830 1017 aa7.14□□□□□ -1.27
RPF2YKR081C HVG1P0CE11 249 aa7.13□□□□□ -1.27
RPF2YKR081C MSC6Q08818 692 aaKnown RBP7.13□□□□□ -1.27
RPF2YKR081C COBP00163 385 aa7.12□□□□□ -1.27
RPF2YKR081C YHL008CP38750 627 aa7.12□□□□□ -1.27
RPF2YKR081C SAM37P50110 327 aa7.12□□□□□ -1.27
RPF2YKR081C MSH6Q03834 1242 aa7.12□□□□□ -1.27
RPF2YKR081C FLP1P03870 423 aa7.11□□□□□ -1.27
RPF2YKR081C SEC20P28791 383 aa7.11□□□□□ -1.27
RPF2YKR081C MAG2Q06436 670 aaKnown RBP7.11□□□□□ -1.27
RPF2YKR081C NOC3Q07896 663 aaPredicted RBP7.1□□□□□ -1.27
RPF2YKR081C RIM11P38615 370 aa7.09□□□□□ -1.27
RPF2YKR081C INP54Q08227 384 aaKnown RBP7.09□□□□□ -1.27
RPF2YKR081C YLL054CQ12244 843 aa7.09□□□□□ -1.27
RPF2YKR081C SLD2P34252 453 aa7.08□□□□□ -1.28
RPF2YKR081C CIC1P38779 376 aaKnown RBP7.08□□□□□ -1.28
RPF2YKR081C YOR223WQ12015 292 aa7.08□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 40.2 ms