RNA–Protein interactions for RNA: YKL085W

MDH1, Transcript of Mitochondrial malate dehydrogenase, yeastyeast

Gene MDH1, Length 1,005 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH1YKL085W YPP1P46951 817 aa8.08□□□□□ -1.12
MDH1YKL085W VPS62P53285 467 aa8.08□□□□□ -1.12
MDH1YKL085W INM2Q05533 292 aa8.08□□□□□ -1.12
MDH1YKL085W NOP8Q08287 484 aaPredicted RBP8.08□□□□□ -1.12
MDH1YKL085W TUB2P02557 457 aaKnown RBP8.07□□□□□ -1.12
MDH1YKL085W SUI2P20459 304 aaKnown RBP8.07□□□□□ -1.12
MDH1YKL085W ACA1P39970 489 aa8.07□□□□□ -1.12
MDH1YKL085W CSI1Q04368 295 aa8.07□□□□□ -1.12
MDH1YKL085W CFT2Q12102 859 aaPredicted RBP8.07□□□□□ -1.12
MDH1YKL085W GYP5Q12344 894 aa8.07□□□□□ -1.12
MDH1YKL085W AI2P03876 854 aa8.06□□□□□ -1.12
MDH1YKL085W CDC60P26637 1090 aaKnown RBP8.06□□□□□ -1.12
MDH1YKL085W DLD1P32891 587 aa8.06□□□□□ -1.12
MDH1YKL085W ATG1P53104 897 aa8.06□□□□□ -1.12
MDH1YKL085W WSC3Q12215 556 aa8.06□□□□□ -1.12
MDH1YKL085W MDL2P33311 773 aa8.05□□□□□ -1.12
MDH1YKL085W LDH1P38139 375 aa8.05□□□□□ -1.12
MDH1YKL085W YBL028CP38202 106 aa8.05□□□□□ -1.12
MDH1YKL085W RSM7P47150 247 aa8.05□□□□□ -1.12
MDH1YKL085W PCL8Q08966 492 aa8.05□□□□□ -1.12
MDH1YKL085W TY3A-GQ12173 290 aa8.05□□□□□ -1.12
MDH1YKL085W TY3A-IQ99219 290 aa8.05□□□□□ -1.12
MDH1YKL085W RPS19AP07280 144 aaKnown RBP8.04□□□□□ -1.12
MDH1YKL085W RPS19BP07281 144 aaPredicted RBP8.04□□□□□ -1.12
MDH1YKL085W KIN1P13185 1064 aa8.04□□□□□ -1.12
MDH1YKL085W MCD4P36051 919 aa8.04□□□□□ -1.12
MDH1YKL085W NOP2P40991 618 aaKnown RBP8.04□□□□□ -1.12
MDH1YKL085W YNL193WP53870 558 aa8.04□□□□□ -1.12
MDH1YKL085W ECM30Q06673 1274 aa8.04□□□□□ -1.12
MDH1YKL085W RPN7Q06103 429 aaKnown RBP8.03□□□□□ -1.12
MDH1YKL085W FIR1P40020 876 aa8.02□□□□□ -1.13
MDH1YKL085W LYS14P40971 790 aa8.02□□□□□ -1.13
MDH1YKL085W YJL007CP47080 104 aa8.02□□□□□ -1.13
MDH1YKL085W ECM29P38737 1868 aa8.01□□□□□ -1.13
MDH1YKL085W PIF1P07271 859 aa8.01□□□□□ -1.13
MDH1YKL085W VAB2P40003 282 aa8.01□□□□□ -1.13
MDH1YKL085W AIM21P40563 679 aa8.01□□□□□ -1.13
MDH1YKL085W MSH4P40965 878 aaPredicted RBP8.01□□□□□ -1.13
MDH1YKL085W ICL2Q12031 575 aa8.01□□□□□ -1.13
MDH1YKL085W DIT2P21595 489 aa8□□□□□ -1.13
MDH1YKL085W TIF11P38912 153 aaKnown RBP8□□□□□ -1.13
MDH1YKL085W EAR1Q03212 550 aa8□□□□□ -1.13
MDH1YKL085W YDL124WQ07551 312 aaKnown RBP8□□□□□ -1.13
MDH1YKL085W RRI2Q12348 645 aa8□□□□□ -1.13
MDH1YKL085W SRS2P12954 1174 aa7.99□□□□□ -1.13
MDH1YKL085W SPB4P25808 606 aaPredicted RBP7.99□□□□□ -1.13
MDH1YKL085W GRX7P38068 203 aa7.99□□□□□ -1.13
MDH1YKL085W AFG3P39925 761 aa7.99□□□□□ -1.13
MDH1YKL085W EPS1P40557 701 aa7.99□□□□□ -1.13
MDH1YKL085W UBX5Q06682 500 aa7.99□□□□□ -1.13
MDH1YKL085W SUT2Q12286 268 aa7.99□□□□□ -1.13
MDH1YKL085W CYB2P00175 591 aa7.98□□□□□ -1.13
MDH1YKL085W RPP0P05317 312 aaKnown RBP7.98□□□□□ -1.13
MDH1YKL085W WHI3P34761 661 aaKnown RBP7.98□□□□□ -1.13
MDH1YKL085W UIP5P36137 443 aa7.98□□□□□ -1.13
MDH1YKL085W BOI1P38041 980 aaKnown RBP7.98□□□□□ -1.13
MDH1YKL085W TIF4631P39935 952 aaKnown RBP7.98□□□□□ -1.13
MDH1YKL085W SNU71P53207 620 aaKnown RBP7.98□□□□□ -1.13
MDH1YKL085W BRE5P53741 515 aaKnown RBP7.98□□□□□ -1.13
MDH1YKL085W YPL034WQ03083 165 aa7.98□□□□□ -1.13
MDH1YKL085W SUB2Q07478 446 aaKnown RBP7.98□□□□□ -1.13
MDH1YKL085W BMT6Q12291 365 aa7.98□□□□□ -1.13
MDH1YKL085W YOR131CQ12486 218 aa7.98□□□□□ -1.13
MDH1YKL085W KRS1P15180 591 aaKnown RBP7.97□□□□□ -1.13
MDH1YKL085W SSF1P38789 453 aaPredicted RBP7.97□□□□□ -1.13
MDH1YKL085W PIP2P52960 996 aa7.97□□□□□ -1.13
MDH1YKL085W MAK21Q12176 1025 aaKnown RBP7.97□□□□□ -1.13
MDH1YKL085W PRE10P21242 288 aaKnown RBP RIP-Chip data7.96□□□□□ -1.14not detected
MDH1YKL085W PER1P25625 357 aa7.96□□□□□ -1.14
MDH1YKL085W EUG1P32474 517 aa7.96□□□□□ -1.14
MDH1YKL085W MXR1P40029 184 aa7.96□□□□□ -1.14
MDH1YKL085W KEL3Q08979 651 aaPredicted RBP7.96□□□□□ -1.14
MDH1YKL085W MDM20Q12387 796 aaKnown RBP7.96□□□□□ -1.14
MDH1YKL085W PKC1P24583 1151 aa7.95□□□□□ -1.14
MDH1YKL085W KTR3P38130 404 aaPredicted RBP7.95□□□□□ -1.14
MDH1YKL085W CST26P38226 397 aa7.95□□□□□ -1.14
MDH1YKL085W YFL040WP43562 540 aa7.95□□□□□ -1.14
MDH1YKL085W LAP2Q10740 671 aa7.95□□□□□ -1.14
MDH1YKL085W MPH3P0CE00 602 aa7.94□□□□□ -1.14
MDH1YKL085W GCD7P32502 381 aaPredicted RBP7.94□□□□□ -1.14
MDH1YKL085W BCS1P32839 456 aa7.94□□□□□ -1.14
MDH1YKL085W VPS27P40343 622 aaKnown RBP7.94□□□□□ -1.14
MDH1YKL085W YDR034W-BQ6Q5X2 51 aa7.94□□□□□ -1.14
MDH1YKL085W TUS1Q06412 1307 aa7.94□□□□□ -1.14
MDH1YKL085W YMR084WA2P2R3 262 aa7.93□□□□□ -1.14
MDH1YKL085W FMP30Q02883 468 aa7.93□□□□□ -1.14
MDH1YKL085W YML037CQ03703 340 aa7.93□□□□□ -1.14
MDH1YKL085W MET7Q08645 548 aa7.93□□□□□ -1.14
MDH1YKL085W ERG12P07277 443 aa7.92□□□□□ -1.14
MDH1YKL085W VMA2P16140 517 aaKnown RBP7.92□□□□□ -1.14
MDH1YKL085W PRE8P23639 250 aa7.92□□□□□ -1.14
MDH1YKL085W HGH1P48362 394 aaKnown RBP7.92□□□□□ -1.14
MDH1YKL085W DUS4Q06063 367 aa7.92□□□□□ -1.14
MDH1YKL085W HIP1P06775 603 aa7.91□□□□□ -1.14
MDH1YKL085W KSP1P38691 1029 aaKnown RBP7.91□□□□□ -1.14
MDH1YKL085W ILV3P39522 585 aaKnown RBP7.91□□□□□ -1.14
MDH1YKL085W GPB2P39717 880 aa7.91□□□□□ -1.14
MDH1YKL085W YIL092WP40497 633 aa7.91□□□□□ -1.14
MDH1YKL085W YJR107WP47145 328 aa7.91□□□□□ -1.14
MDH1YKL085W MAM3Q12296 706 aa7.91□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms