RNA–Protein interactions for RNA: YIL021W

RPB3, Transcript of RNA polymerase II third largest subunit B44, yeast

Gene RPB3, Length 957 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPB3	YIL021W	SPT7	P35177	1332 aa		5.09	□□□□□ -1.59
RPB3	YIL021W	GPM1	P00950	247 aa	Known RBP	5.09	□□□□□ -1.59
RPB3	YIL021W	RGP1	P16664	663 aa		5.09	□□□□□ -1.59
RPB3	YIL021W	FPS1	P23900	669 aa		5.09	□□□□□ -1.59
RPB3	YIL021W	MSC7	P38694	644 aa		5.09	□□□□□ -1.59
RPB3	YIL021W	NSG2	P53898	299 aa		5.09	□□□□□ -1.59
RPB3	YIL021W	YOR093C	Q12275	1648 aa		5.08	□□□□□ -1.6
RPB3	YIL021W	NGR1	P32831	672 aa	Known RBP	5.08	□□□□□ -1.6
RPB3	YIL021W	PAF1	P38351	445 aa		5.08	□□□□□ -1.6
RPB3	YIL021W	HXT5	P38695	592 aa		5.08	□□□□□ -1.6
RPB3	YIL021W	SBE2	P42223	864 aa	Known RBP	5.08	□□□□□ -1.6
RPB3	YIL021W	TY1A-DR2	Q03964	440 aa	Known RBP	5.08	□□□□□ -1.6
RPB3	YIL021W	PUS1	Q12211	544 aa	Known RBP	5.07	□□□□□ -1.6
RPB3	YIL021W	YTA6	P40328	754 aa		5.06	□□□□□ -1.6
RPB3	YIL021W	CHC1	P22137	1653 aa	Known RBP	5.05	□□□□□ -1.6
RPB3	YIL021W	BNR1	P40450	1375 aa		5.05	□□□□□ -1.6
RPB3	YIL021W	SUV3	P32580	737 aa		5.05	□□□□□ -1.6
RPB3	YIL021W	UTP4	Q06679	776 aa	Known RBP	5.05	□□□□□ -1.6
RPB3	YIL021W	MHP1	P43638	1398 aa		5.04	□□□□□ -1.6
RPB3	YIL021W	PDC5	P16467	563 aa	Known RBP	5.04	□□□□□ -1.6
RPB3	YIL021W	PUP1	P25043	261 aa		5.04	□□□□□ -1.6
RPB3	YIL021W	CPS1	P27614	576 aa		5.04	□□□□□ -1.6
RPB3	YIL021W	LSB3	P43603	459 aa	Known RBP	5.04	□□□□□ -1.6
RPB3	YIL021W	SKP1	P52286	194 aa		5.04	□□□□□ -1.6
RPB3	YIL021W	ECM23	Q02710	187 aa		5.04	□□□□□ -1.6
RPB3	YIL021W	TDA6	Q06466	467 aa		5.04	□□□□□ -1.6
RPB3	YIL021W	LTE1	P07866	1435 aa		5.04	□□□□□ -1.6
RPB3	YIL021W	SEC7	P11075	2009 aa	Known RBP	5.04	□□□□□ -1.6
RPB3	YIL021W	KNS1	P32350	737 aa	Predicted RBP	5.03	□□□□□ -1.6
RPB3	YIL021W	SCD5	P34758	872 aa		5.03	□□□□□ -1.6
RPB3	YIL021W	VAN1	P23642	535 aa		5.02	□□□□□ -1.61
RPB3	YIL021W	MTO1	P53070	669 aa		5.02	□□□□□ -1.61
RPB3	YIL021W	TY3B-I	Q7LHG5	1498 aa	Known RBP	5.01	□□□□□ -1.61
RPB3	YIL021W	RPC31	P17890	251 aa		5.01	□□□□□ -1.61
RPB3	YIL021W	KAP122	P32767	1081 aa		5.01	□□□□□ -1.61
RPB3	YIL021W	MCX1	P38323	520 aa	Predicted RBP	5.01	□□□□□ -1.61
RPB3	YIL021W	CCT8	P47079	568 aa	Known RBP	5.01	□□□□□ -1.61
RPB3	YIL021W	CAB1	Q04430	367 aa		5.01	□□□□□ -1.61
RPB3	YIL021W	RAV1	P47104	1357 aa		5.01	□□□□□ -1.61
RPB3	YIL021W	DOP1	Q03921	1698 aa		5	□□□□□ -1.61
RPB3	YIL021W	UBX7	P38349	436 aa		5	□□□□□ -1.61
RPB3	YIL021W	SKN7	P38889	622 aa		5	□□□□□ -1.61
RPB3	YIL021W	YNR040W	P53736	256 aa		5	□□□□□ -1.61
RPB3	YIL021W	ORC1	P54784	914 aa	Predicted RBP	5	□□□□□ -1.61
RPB3	YIL021W	YPR053C	Q6Q5F3	151 aa		5	□□□□□ -1.61
RPB3	YIL021W	VMR1	P38735	1592 aa		4.99	□□□□□ -1.61
RPB3	YIL021W	RTC1	Q08281	1341 aa		4.99	□□□□□ -1.61
RPB3	YIL021W	TRM3	Q07527	1436 aa		4.99	□□□□□ -1.61
RPB3	YIL021W	YCK2	P23292	546 aa	Known RBP	4.99	□□□□□ -1.61
RPB3	YIL021W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.99	□□□□□ -1.61	not detected
RPB3	YIL021W	PRK1	P40494	810 aa		4.99	□□□□□ -1.61
RPB3	YIL021W	YNR014W	P53719	212 aa		4.99	□□□□□ -1.61
RPB3	YIL021W	CUS1	Q02554	436 aa	Predicted RBP	4.99	□□□□□ -1.61
RPB3	YIL021W	HEH2	Q03281	663 aa		4.99	□□□□□ -1.61
RPB3	YIL021W	NUP188	P52593	1655 aa	Known RBP	4.99	□□□□□ -1.61
RPB3	YIL021W	YLR419W	Q06698	1435 aa	Known RBP	4.98	□□□□□ -1.61
RPB3	YIL021W	RPP1A	P05318	106 aa	Predicted RBP	4.98	□□□□□ -1.61
RPB3	YIL021W	BOI2	P39969	1040 aa		4.98	□□□□□ -1.61
RPB3	YIL021W	QDR2	P40474	542 aa		4.98	□□□□□ -1.61
RPB3	YIL021W	YMR187C	Q03236	431 aa		4.98	□□□□□ -1.61
RPB3	YIL021W	YML083C	Q04526	418 aa		4.98	□□□□□ -1.61
RPB3	YIL021W	TRS33	Q99394	268 aa		4.98	□□□□□ -1.61
RPB3	YIL021W	IML1	P47170	1584 aa		4.98	□□□□□ -1.61
RPB3	YIL021W	PDR11	P40550	1411 aa		4.97	□□□□□ -1.61
RPB3	YIL021W	PRS1	P32895	427 aa	Known RBP	4.97	□□□□□ -1.61
RPB3	YIL021W	TAF5	P38129	798 aa		4.97	□□□□□ -1.61
RPB3	YIL021W	YBR197C	P38306	217 aa		4.97	□□□□□ -1.61
RPB3	YIL021W	NOB1	Q08444	459 aa	Known RBP	4.97	□□□□□ -1.61
RPB3	YIL021W	DRS2	P39524	1355 aa		4.96	□□□□□ -1.62
RPB3	YIL021W	MRPL33	P20084	86 aa		4.96	□□□□□ -1.62
RPB3	YIL021W	VMA3	P25515	160 aa		4.96	□□□□□ -1.62
RPB3	YIL021W	SCT1	P32784	759 aa		4.96	□□□□□ -1.62
RPB3	YIL021W	ESL2	P36168	1195 aa		4.96	□□□□□ -1.62
RPB3	YIL021W	APM2	P38700	605 aa		4.96	□□□□□ -1.62
RPB3	YIL021W	CWH41	P53008	833 aa		4.96	□□□□□ -1.62
RPB3	YIL021W	YDR215C	Q12240	137 aa		4.96	□□□□□ -1.62
RPB3	YIL021W	MET1	P36150	593 aa		4.95	□□□□□ -1.62
RPB3	YIL021W	NCL1	P38205	684 aa	Known RBP	4.95	□□□□□ -1.62
RPB3	YIL021W	SLN1	P39928	1220 aa	Predicted RBP	4.95	□□□□□ -1.62
RPB3	YIL021W	ALD4	P46367	519 aa	Known RBP	4.95	□□□□□ -1.62
RPB3	YIL021W	PDS5	Q04264	1277 aa		4.95	□□□□□ -1.62
RPB3	YIL021W	NUP192	P47054	1683 aa		4.94	□□□□□ -1.62
RPB3	YIL021W	MRP10	O75012	95 aa		4.94	□□□□□ -1.62
RPB3	YIL021W	CAB3	P36076	571 aa		4.94	□□□□□ -1.62
RPB3	YIL021W	ITC1	P53125	1264 aa		4.94	□□□□□ -1.62
RPB3	YIL021W	FOX2	Q02207	900 aa	Known RBP	4.94	□□□□□ -1.62
RPB3	YIL021W	CWC15	Q03772	175 aa	Known RBP	4.94	□□□□□ -1.62
RPB3	YIL021W	PUF6	Q04373	656 aa	Known RBP	4.94	□□□□□ -1.62
RPB3	YIL021W	DNF2	Q12675	1612 aa		4.94	□□□□□ -1.62
RPB3	YIL021W	BNI1	P41832	1953 aa		4.93	□□□□□ -1.62
RPB3	YIL021W	SSA4	P22202	642 aa	Known RBP	4.93	□□□□□ -1.62
RPB3	YIL021W	NAR1	P23503	491 aa	Known RBP	4.93	□□□□□ -1.62
RPB3	YIL021W	EBP2	P36049	427 aa	Known RBP	4.93	□□□□□ -1.62
RPB3	YIL021W	KIP3	P53086	805 aa	Known RBP	4.93	□□□□□ -1.62
RPB3	YIL021W	IDI1	P15496	288 aa		4.92	□□□□□ -1.62
RPB3	YIL021W	ISC10	P32645	267 aa		4.92	□□□□□ -1.62
RPB3	YIL021W	PGM2	P37012	569 aa	Known RBP	4.92	□□□□□ -1.62
RPB3	YIL021W	PUN1	Q06991	263 aa		4.92	□□□□□ -1.62
RPB3	YIL021W	SUB2	Q07478	446 aa	Known RBP	4.92	□□□□□ -1.62
RPB3	YIL021W	YOR296W	Q08748	1289 aa		4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms