RNA–Protein interactions for RNA: YHR088W

RPF1, Transcript of Protein involved in assembly and export of the large ribosomal subunit, yeastyeast

Gene RPF1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF1YHR088W SPO71Q03868 1245 aa5.79□□□□□ -1.48
RPF1YHR088W YLR122CQ12312 125 aa5.79□□□□□ -1.48
RPF1YHR088W RLF2Q12495 606 aa5.79□□□□□ -1.48
RPF1YHR088W GLT1Q12680 2145 aaKnown RBP5.78□□□□□ -1.48
RPF1YHR088W CHS2P14180 963 aa5.78□□□□□ -1.48
RPF1YHR088W IRS4P36115 615 aaKnown RBP5.78□□□□□ -1.48
RPF1YHR088W PAN5P38787 379 aa5.78□□□□□ -1.48
RPF1YHR088W RAD55P38953 406 aa5.78□□□□□ -1.48
RPF1YHR088W ALD3P54114 506 aa5.78□□□□□ -1.48
RPF1YHR088W MAE1P36013 669 aaKnown RBP5.77□□□□□ -1.49
RPF1YHR088W SUT1P53032 299 aaKnown RBP5.77□□□□□ -1.49
RPF1YHR088W REC8Q12188 680 aa5.77□□□□□ -1.49
RPF1YHR088W POL5P39985 1022 aaKnown RBP5.76□□□□□ -1.49
RPF1YHR088W PSY2P40164 858 aa5.76□□□□□ -1.49
RPF1YHR088W KTR2P33550 425 aa5.75□□□□□ -1.49
RPF1YHR088W TFA2P36145 328 aa5.75□□□□□ -1.49
RPF1YHR088W SUB2Q07478 446 aaKnown RBP5.75□□□□□ -1.49
RPF1YHR088W BOI1P38041 980 aaKnown RBP5.74□□□□□ -1.49
RPF1YHR088W PUF3Q07807 879 aaKnown RBP RIP-Chip data5.74□□□□□ -1.49not detected
RPF1YHR088W TIF6Q12522 245 aaKnown RBP5.74□□□□□ -1.49
RPF1YHR088W PUB1P32588 453 aaKnown RBP RIP-Chip data5.73□□□□□ -1.49not detected
RPF1YHR088W IRC24P40580 263 aa5.73□□□□□ -1.49
RPF1YHR088W SPO74P45819 413 aa5.73□□□□□ -1.49
RPF1YHR088W FAR11P53917 953 aa5.73□□□□□ -1.49
RPF1YHR088W ELG1Q12050 791 aa5.73□□□□□ -1.49
RPF1YHR088W TRP3P00937 484 aa5.72□□□□□ -1.49
RPF1YHR088W HVG1P0CE11 249 aa5.72□□□□□ -1.49
RPF1YHR088W MSB1P21339 1137 aaKnown RBP5.72□□□□□ -1.49
RPF1YHR088W YKR073CP36153 106 aa5.72□□□□□ -1.49
RPF1YHR088W NEO1P40527 1151 aa5.72□□□□□ -1.49
RPF1YHR088W NCE103P53615 221 aa5.72□□□□□ -1.49
RPF1YHR088W YNR065CP53751 1116 aa5.72□□□□□ -1.49
RPF1YHR088W GLO4Q12320 285 aa5.72□□□□□ -1.49
RPF1YHR088W RPB10P22139 70 aa5.71□□□□□ -1.5
RPF1YHR088W TOS1P38288 455 aa5.71□□□□□ -1.5
RPF1YHR088W AKR1P39010 764 aa5.71□□□□□ -1.5
RPF1YHR088W FET4P40988 552 aa5.71□□□□□ -1.5
RPF1YHR088W YJR124CP47159 448 aa5.71□□□□□ -1.5
RPF1YHR088W UFD2P54860 961 aa5.71□□□□□ -1.5
RPF1YHR088W YLL054CQ12244 843 aa5.71□□□□□ -1.5
RPF1YHR088W LIP5P32875 414 aa5.7□□□□□ -1.5
RPF1YHR088W BOL3P39724 118 aa5.7□□□□□ -1.5
RPF1YHR088W YGR130CP53278 816 aa5.7□□□□□ -1.5
RPF1YHR088W HAS1Q03532 505 aaKnown RBP5.7□□□□□ -1.5
RPF1YHR088W RPL34AP87262 121 aaPredicted RBP5.69□□□□□ -1.5
RPF1YHR088W BRE4Q07660 1125 aa5.69□□□□□ -1.5
RPF1YHR088W CYC7P00045 113 aa5.68□□□□□ -1.5
RPF1YHR088W NAM7P30771 971 aaKnown RBP5.68□□□□□ -1.5
RPF1YHR088W PYC2P32327 1180 aaKnown RBP5.68□□□□□ -1.5
RPF1YHR088W RSC4Q02206 625 aa5.68□□□□□ -1.5
RPF1YHR088W GIC2Q06648 383 aa5.67□□□□□ -1.5
RPF1YHR088W YOR223WQ12015 292 aa5.67□□□□□ -1.5
RPF1YHR088W ACF4P47129 309 aa5.66□□□□□ -1.5
RPF1YHR088W ATG1P53104 897 aa5.66□□□□□ -1.5
RPF1YHR088W KAR5Q04746 504 aa5.66□□□□□ -1.5
RPF1YHR088W MAG2Q06436 670 aaKnown RBP5.66□□□□□ -1.5
RPF1YHR088W AOS1Q06624 347 aa5.66□□□□□ -1.5
RPF1YHR088W CTH1P47976 325 aa5.65□□□□□ -1.5
RPF1YHR088W GCV1P48015 400 aa5.65□□□□□ -1.5
RPF1YHR088W ERS1P17261 260 aa5.64□□□□□ -1.51
RPF1YHR088W ELM1P32801 640 aa5.64□□□□□ -1.51
RPF1YHR088W ECM2P38241 364 aaKnown RBP5.64□□□□□ -1.51
RPF1YHR088W AVT1P47082 602 aa5.64□□□□□ -1.51
RPF1YHR088W KIP3P53086 805 aaKnown RBP5.64□□□□□ -1.51
RPF1YHR088W YOR059CQ08448 450 aaKnown RBP5.64□□□□□ -1.51
RPF1YHR088W NSI1Q12457 570 aa5.64□□□□□ -1.51
RPF1YHR088W GLO3P38682 493 aaKnown RBP5.63□□□□□ -1.51
RPF1YHR088W QDR1P40475 563 aa5.63□□□□□ -1.51
RPF1YHR088W YIG1Q08956 461 aa5.63□□□□□ -1.51
RPF1YHR088W PRP5P21372 849 aaPredicted RBP5.62□□□□□ -1.51
RPF1YHR088W MMM1P41800 426 aa5.62□□□□□ -1.51
RPF1YHR088W CTR9P89105 1077 aa5.62□□□□□ -1.51
RPF1YHR088W MSH6Q03834 1242 aa5.62□□□□□ -1.51
RPF1YHR088W YMR074CQ04773 145 aa5.62□□□□□ -1.51
RPF1YHR088W RIM11P38615 370 aa5.61□□□□□ -1.51
RPF1YHR088W CIT3P43635 486 aa5.61□□□□□ -1.51
RPF1YHR088W YNL011CP53980 444 aa5.61□□□□□ -1.51
RPF1YHR088W SSA1P10591 642 aaKnown RBP5.6□□□□□ -1.51
RPF1YHR088W NPR1P22211 790 aa5.6□□□□□ -1.51
RPF1YHR088W TRS120Q04183 1289 aa5.6□□□□□ -1.51
RPF1YHR088W HTS1P07263 546 aaKnown RBP5.59□□□□□ -1.51
RPF1YHR088W CDC55Q00362 526 aa5.59□□□□□ -1.51
RPF1YHR088W MEC3Q02574 474 aa5.59□□□□□ -1.51
RPF1YHR088W ARL1P38116 183 aaKnown RBP5.58□□□□□ -1.52
RPF1YHR088W SAP155P43612 1002 aa5.58□□□□□ -1.52
RPF1YHR088W DOT1Q04089 582 aaKnown RBP5.58□□□□□ -1.52
RPF1YHR088W BSC2Q05611 235 aa5.58□□□□□ -1.52
RPF1YHR088W CMR1Q12510 522 aaKnown RBP5.58□□□□□ -1.52
RPF1YHR088W GPT2P36148 743 aa5.57□□□□□ -1.52
RPF1YHR088W ECL1P48235 211 aa5.57□□□□□ -1.52
RPF1YHR088W UTP22P53254 1237 aaPredicted RBP5.57□□□□□ -1.52
RPF1YHR088W PMT7Q06644 662 aa5.57□□□□□ -1.52
RPF1YHR088W COBP00163 385 aa5.56□□□□□ -1.52
RPF1YHR088W FLP1P03870 423 aa5.55□□□□□ -1.52
RPF1YHR088W CDC3P32457 520 aaKnown RBP5.55□□□□□ -1.52
RPF1YHR088W YHL008CP38750 627 aa5.55□□□□□ -1.52
RPF1YHR088W NIT1P40447 199 aa5.55□□□□□ -1.52
RPF1YHR088W TRL1P09880 827 aaKnown RBP5.54□□□□□ -1.52
RPF1YHR088W RCM1P53972 490 aa5.54□□□□□ -1.52
RPF1YHR088W MNL2Q12205 849 aa5.54□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 120.4 ms