RNA–Protein interactions for RNA: YHR056C

RSC30, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC30, Length 2,652 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC30	YHR056C	FUN12	P39730	1002 aa	Known RBP	6.97	□□□□□ -1.29
RSC30	YHR056C	MPH3	P0CE00	602 aa		6.97	□□□□□ -1.29
RSC30	YHR056C	EUG1	P32474	517 aa		6.97	□□□□□ -1.29
RSC30	YHR056C	YKR018C	P36114	725 aa		6.97	□□□□□ -1.29
RSC30	YHR056C	NPL4	P33755	580 aa		6.96	□□□□□ -1.29
RSC30	YHR056C	PTK2	P47116	818 aa	Known RBP	6.96	□□□□□ -1.29
RSC30	YHR056C	CYB2	P00175	591 aa		6.96	□□□□□ -1.3
RSC30	YHR056C	GEF1	P37020	779 aa		6.96	□□□□□ -1.3
RSC30	YHR056C	GRS1	P38088	690 aa	Known RBP	6.96	□□□□□ -1.3
RSC30	YHR056C	YHR131C	P38835	850 aa		6.96	□□□□□ -1.3
RSC30	YHR056C	RTT109	Q07794	436 aa		6.96	□□□□□ -1.3
RSC30	YHR056C	TIM23	P32897	222 aa		6.95	□□□□□ -1.3
RSC30	YHR056C	NOP8	Q08287	484 aa	Predicted RBP	6.95	□□□□□ -1.3
RSC30	YHR056C	GLO3	P38682	493 aa	Known RBP	6.94	□□□□□ -1.3
RSC30	YHR056C	CST26	P38226	397 aa		6.94	□□□□□ -1.3
RSC30	YHR056C	TIF4631	P39935	952 aa	Known RBP	6.94	□□□□□ -1.3
RSC30	YHR056C	MAM3	Q12296	706 aa		6.94	□□□□□ -1.3
RSC30	YHR056C	CDC19	P00549	500 aa	Known RBP	6.93	□□□□□ -1.3
RSC30	YHR056C	TUB2	P02557	457 aa	Known RBP	6.93	□□□□□ -1.3
RSC30	YHR056C	VMA2	P16140	517 aa	Known RBP	6.93	□□□□□ -1.3
RSC30	YHR056C	PTK1	P36002	662 aa	Predicted RBP	6.93	□□□□□ -1.3
RSC30	YHR056C	AVT3	P36062	692 aa		6.93	□□□□□ -1.3
RSC30	YHR056C	MCM6	P53091	1017 aa	Known RBP	6.93	□□□□□ -1.3
RSC30	YHR056C	HEF3	P53978	1044 aa	Known RBP	6.93	□□□□□ -1.3
RSC30	YHR056C	TOM71	P38825	639 aa	Known RBP	6.93	□□□□□ -1.3
RSC30	YHR056C	AFG3	P39925	761 aa		6.93	□□□□□ -1.3
RSC30	YHR056C	RSC8	P43609	557 aa	Known RBP	6.93	□□□□□ -1.3
RSC30	YHR056C	HGH1	P48362	394 aa	Known RBP	6.93	□□□□□ -1.3
RSC30	YHR056C	PIP2	P52960	996 aa		6.93	□□□□□ -1.3
RSC30	YHR056C	UBX5	Q06682	500 aa		6.93	□□□□□ -1.3
RSC30	YHR056C	YDR034W-B	Q6Q5X2	51 aa		6.93	□□□□□ -1.3
RSC30	YHR056C	PES4	P39684	611 aa		6.91	□□□□□ -1.3
RSC30	YHR056C	YPP1	P46951	817 aa		6.91	□□□□□ -1.3
RSC30	YHR056C	IRE1	P32361	1115 aa		6.91	□□□□□ -1.3
RSC30	YHR056C	SSF1	P38789	453 aa	Predicted RBP	6.91	□□□□□ -1.3
RSC30	YHR056C	YDL124W	Q07551	312 aa	Known RBP	6.91	□□□□□ -1.3
RSC30	YHR056C	GYP5	Q12344	894 aa		6.91	□□□□□ -1.3
RSC30	YHR056C	MDL2	P33311	773 aa		6.9	□□□□□ -1.3
RSC30	YHR056C	BRE5	P53741	515 aa	Known RBP	6.9	□□□□□ -1.3
RSC30	YHR056C	LAM4	P38800	1345 aa		6.9	□□□□□ -1.31
RSC30	YHR056C	BCS1	P32839	456 aa		6.9	□□□□□ -1.31
RSC30	YHR056C	RPT3	P33298	428 aa	Known RBP	6.9	□□□□□ -1.31
RSC30	YHR056C	YGR125W	P53273	1036 aa		6.9	□□□□□ -1.31
RSC30	YHR056C	SOL4	P53315	255 aa		6.9	□□□□□ -1.31
RSC30	YHR056C	DAP1	Q12091	152 aa		6.9	□□□□□ -1.31
RSC30	YHR056C	YPR117W	Q06116	2489 aa		6.89	□□□□□ -1.31
RSC30	YHR056C	BOI1	P38041	980 aa	Known RBP	6.89	□□□□□ -1.31
RSC30	YHR056C	BOI2	P39969	1040 aa		6.89	□□□□□ -1.31
RSC30	YHR056C	INM2	Q05533	292 aa		6.89	□□□□□ -1.31
RSC30	YHR056C	POA1	P38218	177 aa		6.87	□□□□□ -1.31
RSC30	YHR056C	ALD6	P54115	500 aa	Known RBP	6.87	□□□□□ -1.31
RSC30	YHR056C	YML037C	Q03703	340 aa		6.87	□□□□□ -1.31
RSC30	YHR056C	RRI2	Q12348	645 aa		6.87	□□□□□ -1.31
RSC30	YHR056C	SEC18	P18759	758 aa	Known RBP	6.87	□□□□□ -1.31
RSC30	YHR056C	JHD1	P40034	492 aa		6.87	□□□□□ -1.31
RSC30	YHR056C	VPS53	P47061	822 aa		6.87	□□□□□ -1.31
RSC30	YHR056C	POL3	P15436	1097 aa		6.86	□□□□□ -1.31
RSC30	YHR056C	GPT2	P36148	743 aa		6.86	□□□□□ -1.31
RSC30	YHR056C	HAL5	P38970	855 aa	Known RBP	6.86	□□□□□ -1.31
RSC30	YHR056C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	6.86	□□□□□ -1.31	not detected
RSC30	YHR056C	TAO3	P40468	2376 aa		6.86	□□□□□ -1.31
RSC30	YHR056C	TOM1	Q03280	3268 aa		6.86	□□□□□ -1.31
RSC30	YHR056C	TPD3	P31383	635 aa		6.86	□□□□□ -1.31
RSC30	YHR056C	FOL2	P51601	243 aa	Known RBP	6.86	□□□□□ -1.31
RSC30	YHR056C	DBP1	P24784	617 aa	Known RBP	6.85	□□□□□ -1.31
RSC30	YHR056C	PRE8	P23639	250 aa		6.85	□□□□□ -1.31
RSC30	YHR056C	RAD24	P32641	659 aa		6.85	□□□□□ -1.31
RSC30	YHR056C	NOC2	P39744	710 aa	Known RBP	6.85	□□□□□ -1.31
RSC30	YHR056C	KEL3	Q08979	651 aa	Predicted RBP	6.85	□□□□□ -1.31
RSC30	YHR056C	YDR524C-B	Q3E6R4	66 aa		6.85	□□□□□ -1.31
RSC30	YHR056C	ECM29	P38737	1868 aa		6.85	□□□□□ -1.31
RSC30	YHR056C	MIP1	P15801	1254 aa		6.84	□□□□□ -1.31
RSC30	YHR056C	RPS19A	P07280	144 aa	Known RBP	6.84	□□□□□ -1.31
RSC30	YHR056C	RPS19B	P07281	144 aa	Predicted RBP	6.84	□□□□□ -1.31
RSC30	YHR056C	IDI1	P15496	288 aa		6.84	□□□□□ -1.31
RSC30	YHR056C	YIR042C	P40586	236 aa		6.84	□□□□□ -1.31
RSC30	YHR056C	SKG3	Q06315	1026 aa		6.84	□□□□□ -1.31
RSC30	YHR056C	SNA3	P14359	133 aa		6.83	□□□□□ -1.32
RSC30	YHR056C	SEC8	P32855	1065 aa		6.83	□□□□□ -1.32
RSC30	YHR056C	SPT21	P35209	758 aa		6.83	□□□□□ -1.32
RSC30	YHR056C	OYE3	P41816	400 aa	Predicted RBP	6.83	□□□□□ -1.32
RSC30	YHR056C	HXT10	P43581	546 aa		6.83	□□□□□ -1.32
RSC30	YHR056C	DUS4	Q06063	367 aa		6.83	□□□□□ -1.32
RSC30	YHR056C	BRL1	P38770	471 aa		6.83	□□□□□ -1.32
RSC30	YHR056C	NSG2	P53898	299 aa		6.83	□□□□□ -1.32
RSC30	YHR056C	MAK21	Q12176	1025 aa	Known RBP	6.83	□□□□□ -1.32
RSC30	YHR056C	UBR2	Q07963	1872 aa		6.83	□□□□□ -1.32
RSC30	YHR056C	HIP1	P06775	603 aa		6.83	□□□□□ -1.32
RSC30	YHR056C	SKP2	P42843	763 aa		6.83	□□□□□ -1.32
RSC30	YHR056C	LAP2	Q10740	671 aa		6.83	□□□□□ -1.32
RSC30	YHR056C	RTP1	Q12751	981 aa		6.83	□□□□□ -1.32
RSC30	YHR056C	RPP0	P05317	312 aa	Known RBP	6.82	□□□□□ -1.32
RSC30	YHR056C	PDC1	P06169	563 aa	Known RBP	6.82	□□□□□ -1.32
RSC30	YHR056C	SRM1	P21827	482 aa		6.82	□□□□□ -1.32
RSC30	YHR056C	ISA1	Q07821	250 aa	Predicted RBP	6.82	□□□□□ -1.32
RSC30	YHR056C	GUA1	P38625	525 aa	Known RBP	6.82	□□□□□ -1.32
RSC30	YHR056C	IOC3	P43596	787 aa		6.82	□□□□□ -1.32
RSC30	YHR056C	YML020W	Q03722	664 aa		6.82	□□□□□ -1.32
RSC30	YHR056C	YPL260W	Q08977	551 aa		6.81	□□□□□ -1.32
RSC30	YHR056C	MCM4	P30665	933 aa	Known RBP	6.81	□□□□□ -1.32

Retrieved 100 of 5,963 RNA–protein pairs in 62.4 ms