RNA–Protein interactions for RNA: YHL009W-B

YHL009W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YHL009W-B, Length 5,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YHL009W-BYHL009W-B SIT4P20604 311 aa-0.27□□□□□ -2.45
YHL009W-BYHL009W-B RPA135P22138 1203 aaKnown RBP-0.27□□□□□ -2.45
YHL009W-BYHL009W-B CDC3P32457 520 aaKnown RBP-0.27□□□□□ -2.45
YHL009W-BYHL009W-B SQT1P35184 431 aa-0.27□□□□□ -2.45
YHL009W-BYHL009W-B DOT6P40059 670 aaKnown RBP-0.27□□□□□ -2.45
YHL009W-BYHL009W-B JJJ3P47138 172 aa-0.27□□□□□ -2.45
YHL009W-BYHL009W-B TFB3Q03290 321 aa-0.27□□□□□ -2.45
YHL009W-BYHL009W-B HVG1P0CE11 249 aa-0.27□□□□□ -2.45
YHL009W-BYHL009W-B MDM10P18409 493 aa-0.27□□□□□ -2.45
YHL009W-BYHL009W-B UBA4P38820 440 aa-0.27□□□□□ -2.45
YHL009W-BYHL009W-B CEM1P39525 442 aa-0.27□□□□□ -2.45
YHL009W-BYHL009W-B MNN10P50108 393 aaKnown RBP-0.27□□□□□ -2.45
YHL009W-BYHL009W-B HIM1Q06674 414 aa-0.27□□□□□ -2.45
YHL009W-BYHL009W-B RFA1P22336 621 aaKnown RBP-0.28□□□□□ -2.45
YHL009W-BYHL009W-B PZF1P39933 429 aa-0.28□□□□□ -2.45
YHL009W-BYHL009W-B RSP5P39940 809 aaKnown RBP-0.28□□□□□ -2.45
YHL009W-BYHL009W-B ATG32P40458 529 aa-0.28□□□□□ -2.45
YHL009W-BYHL009W-B YFL066CP43538 392 aa-0.28□□□□□ -2.45
YHL009W-BYHL009W-B NAM8Q00539 523 aaKnown RBP-0.28□□□□□ -2.45
YHL009W-BYHL009W-B MCM16Q12262 181 aa-0.28□□□□□ -2.45
YHL009W-BYHL009W-B YCK2P23292 546 aaKnown RBP-0.28□□□□□ -2.45
YHL009W-BYHL009W-B TUB4P53378 473 aa-0.28□□□□□ -2.45
YHL009W-BYHL009W-B PUF2Q12221 1075 aaKnown RBP RIP-Chip data-0.28□□□□□ -2.45not detected
YHL009W-BYHL009W-B MMP1Q12372 583 aa-0.28□□□□□ -2.45
YHL009W-BYHL009W-B CMP2P14747 604 aa-0.28□□□□□ -2.45
YHL009W-BYHL009W-B RFC1P38630 861 aaKnown RBP-0.28□□□□□ -2.45
YHL009W-BYHL009W-B DSS1P39112 969 aa-0.28□□□□□ -2.45
YHL009W-BYHL009W-B YJR098CP47139 656 aa-0.28□□□□□ -2.45
YHL009W-BYHL009W-B ELA1P53861 379 aaPredicted RBP-0.28□□□□□ -2.45
YHL009W-BYHL009W-B UBP2Q01476 1272 aa-0.28□□□□□ -2.45
YHL009W-BYHL009W-B ULP1Q02724 621 aa-0.28□□□□□ -2.45
YHL009W-BYHL009W-B AFT1P22149 690 aa-0.28□□□□□ -2.45
YHL009W-BYHL009W-B FIR1P40020 876 aa-0.28□□□□□ -2.45
YHL009W-BYHL009W-B CSR2Q12734 1121 aa-0.28□□□□□ -2.45
YHL009W-BYHL009W-B ABZ1P37254 787 aaPredicted RBP-0.29□□□□□ -2.46
YHL009W-BYHL009W-B YHR033WP38690 423 aa-0.29□□□□□ -2.46
YHL009W-BYHL009W-B YFL054CP43549 646 aa-0.29□□□□□ -2.46
YHL009W-BYHL009W-B TFB4Q12004 338 aa-0.29□□□□□ -2.46
YHL009W-BYHL009W-B ADR1P07248 1323 aa-0.29□□□□□ -2.46
YHL009W-BYHL009W-B RAM2P29703 316 aa-0.29□□□□□ -2.46
YHL009W-BYHL009W-B MRPL16P38064 232 aa-0.29□□□□□ -2.46
YHL009W-BYHL009W-B CSN12P47130 423 aa-0.29□□□□□ -2.46
YHL009W-BYHL009W-B HED1Q03937 162 aa-0.29□□□□□ -2.46
YHL009W-BYHL009W-B SPR28Q04921 423 aa-0.29□□□□□ -2.46
YHL009W-BYHL009W-B NEW1Q08972 1196 aaKnown RBP-0.29□□□□□ -2.46
YHL009W-BYHL009W-B NUP192P47054 1683 aa-0.29□□□□□ -2.46
YHL009W-BYHL009W-B RPB10P22139 70 aa-0.29□□□□□ -2.46
YHL009W-BYHL009W-B TEA1P47988 759 aa-0.29□□□□□ -2.46
YHL009W-BYHL009W-B CBC2Q08920 208 aaKnown RBP RIP-Chip data-0.29□□□□□ -2.46not detected
YHL009W-BYHL009W-B SPO21Q12411 609 aa-0.29□□□□□ -2.46
YHL009W-BYHL009W-B TY1B-NL2Q99337 1749 aaKnown RBP-0.29□□□□□ -2.46
YHL009W-BYHL009W-B YLR358CO13565 187 aa-0.29□□□□□ -2.46
YHL009W-BYHL009W-B RPS9BP05755 195 aaKnown RBP-0.29□□□□□ -2.46
YHL009W-BYHL009W-B STE4P18851 423 aa-0.29□□□□□ -2.46
YHL009W-BYHL009W-B APL1P27351 700 aa-0.29□□□□□ -2.46
YHL009W-BYHL009W-B UBP14P38237 781 aaKnown RBP-0.29□□□□□ -2.46
YHL009W-BYHL009W-B LYS9P38999 446 aa-0.29□□□□□ -2.46
YHL009W-BYHL009W-B SAH1P39954 449 aaKnown RBP-0.29□□□□□ -2.46
YHL009W-BYHL009W-B MAF1P41910 395 aa-0.29□□□□□ -2.46
YHL009W-BYHL009W-B KAR5Q04746 504 aa-0.29□□□□□ -2.46
YHL009W-BYHL009W-B HEL2Q05580 639 aaKnown RBP-0.29□□□□□ -2.46
YHL009W-BYHL009W-B SGO1Q08490 590 aa-0.29□□□□□ -2.46
YHL009W-BYHL009W-B ISU2Q12056 156 aa-0.29□□□□□ -2.46
YHL009W-BYHL009W-B DNF3Q12674 1656 aa-0.3□□□□□ -2.46
YHL009W-BYHL009W-B UTR2P32623 467 aa-0.3□□□□□ -2.46
YHL009W-BYHL009W-B YHR131CP38835 850 aa-0.3□□□□□ -2.46
YHL009W-BYHL009W-B BIM1P40013 344 aa-0.3□□□□□ -2.46
YHL009W-BYHL009W-B MDR1P53258 950 aa-0.3□□□□□ -2.46
YHL009W-BYHL009W-B PFA5Q03289 374 aa-0.3□□□□□ -2.46
YHL009W-BYHL009W-B NAB6Q03735 1134 aaKnown RBP RIP-Chip data-0.3□□□□□ -2.46not detected
YHL009W-BYHL009W-B UBX5Q06682 500 aa-0.3□□□□□ -2.46
YHL009W-BYHL009W-B VTS1Q08831 523 aaKnown RBP RIP-Chip data-0.3□□□□□ -2.46not detected
YHL009W-BYHL009W-B LAS17Q12446 633 aa-0.3□□□□□ -2.46
YHL009W-BYHL009W-B PRO1P32264 428 aa-0.3□□□□□ -2.46
YHL009W-BYHL009W-B ACS2P52910 683 aaKnown RBP-0.3□□□□□ -2.46
YHL009W-BYHL009W-B SEC3P33332 1336 aaKnown RBP-0.3□□□□□ -2.46
YHL009W-BYHL009W-B FLO11P08640 1367 aa-0.3□□□□□ -2.46
YHL009W-BYHL009W-B ESP1Q03018 1630 aa-0.3□□□□□ -2.46
YHL009W-BYHL009W-B PUB1P32588 453 aaKnown RBP RIP-Chip data-0.3□□□□□ -2.46not detected
YHL009W-BYHL009W-B ROG3P43602 733 aa-0.3□□□□□ -2.46
YHL009W-BYHL009W-B ESC2Q06340 456 aa-0.3□□□□□ -2.46
YHL009W-BYHL009W-B FIG2P25653 1609 aa-0.3□□□□□ -2.46
YHL009W-BYHL009W-B YOR093CQ12275 1648 aa-0.3□□□□□ -2.46
YHL009W-BYHL009W-B TRP3P00937 484 aa-0.3□□□□□ -2.46
YHL009W-BYHL009W-B KNS1P32350 737 aaPredicted RBP-0.3□□□□□ -2.46
YHL009W-BYHL009W-B ISC10P32645 267 aa-0.3□□□□□ -2.46
YHL009W-BYHL009W-B GUA1P38625 525 aaKnown RBP-0.3□□□□□ -2.46
YHL009W-BYHL009W-B YNL195CP40168 261 aa-0.3□□□□□ -2.46
YHL009W-BYHL009W-B ARI1P53111 347 aaKnown RBP-0.3□□□□□ -2.46
YHL009W-BYHL009W-B DUS1P53759 423 aaKnown RBP-0.3□□□□□ -2.46
YHL009W-BYHL009W-B YLR225CQ05948 407 aaKnown RBP-0.3□□□□□ -2.46
YHL009W-BYHL009W-B MRL1Q06815 381 aa-0.3□□□□□ -2.46
YHL009W-BYHL009W-B RCL1Q08096 367 aaPredicted RBP-0.3□□□□□ -2.46
YHL009W-BYHL009W-B FPS1P23900 669 aa-0.31□□□□□ -2.46
YHL009W-BYHL009W-B GUT1P32190 709 aa-0.31□□□□□ -2.46
YHL009W-BYHL009W-B TOS1P38288 455 aa-0.31□□□□□ -2.46
YHL009W-BYHL009W-B PTC7P38797 343 aa-0.31□□□□□ -2.46
YHL009W-BYHL009W-B VAC8P39968 578 aa-0.31□□□□□ -2.46
YHL009W-BYHL009W-B YER158CP40095 573 aa-0.31□□□□□ -2.46
YHL009W-BYHL009W-B SPO74P45819 413 aa-0.31□□□□□ -2.46
Retrieved 100 of 5,963 RNA–protein pairs in 37.8 ms