RNA–Protein interactions for RNA: YGR109C

CLB6, Transcript of B-type cyclin involved in DNA replication during S phase, yeastyeast

Gene CLB6, Length 1,143 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLB6YGR109C SNU66Q12420 587 aaPredicted RBP12.03□□□□□ -0.48
CLB6YGR109C SWC3P31376 625 aa12.02□□□□□ -0.49
CLB6YGR109C ULI1P43604 169 aa12.02□□□□□ -0.49
CLB6YGR109C YGR122WP53272 402 aa12.02□□□□□ -0.49
CLB6YGR109C YBL029C-AQ3E756 94 aa12.02□□□□□ -0.49
CLB6YGR109C CDC3P32457 520 aaKnown RBP12.01□□□□□ -0.49
CLB6YGR109C PML39Q03760 334 aa12.01□□□□□ -0.49
CLB6YGR109C TRM1P15565 570 aaKnown RBP12□□□□□ -0.49
CLB6YGR109C PUP1P25043 261 aa12□□□□□ -0.49
CLB6YGR109C TIF11P38912 153 aaKnown RBP12□□□□□ -0.49
CLB6YGR109C ICP55P40051 511 aa12□□□□□ -0.49
CLB6YGR109C VNX1P42839 908 aa12□□□□□ -0.49
CLB6YGR109C ATG20Q07528 640 aa12□□□□□ -0.49
CLB6YGR109C MSM1P22438 575 aa11.99□□□□□ -0.49
CLB6YGR109C SSF1P38789 453 aaPredicted RBP11.99□□□□□ -0.49
CLB6YGR109C YNG2P38806 282 aaKnown RBP11.99□□□□□ -0.49
CLB6YGR109C NUG1P40010 520 aaKnown RBP11.99□□□□□ -0.49
CLB6YGR109C SRC1Q03707 834 aa11.99□□□□□ -0.49
CLB6YGR109C YML083CQ04526 418 aa11.99□□□□□ -0.49
CLB6YGR109C ISU2Q12056 156 aa11.99□□□□□ -0.49
CLB6YGR109C KRE2P27809 442 aa11.98□□□□□ -0.49
CLB6YGR109C RET1P22276 1149 aaKnown RBP11.97□□□□□ -0.49
CLB6YGR109C NGR1P32831 672 aaKnown RBP11.96□□□□□ -0.49
CLB6YGR109C PEX29Q03370 554 aa11.96□□□□□ -0.49
CLB6YGR109C THI3Q07471 609 aa11.96□□□□□ -0.49
CLB6YGR109C PSF3Q12146 194 aa11.96□□□□□ -0.49
CLB6YGR109C KEX2P13134 814 aa11.95□□□□□ -0.5
CLB6YGR109C NAF1P53919 492 aaKnown RBP11.95□□□□□ -0.5
CLB6YGR109C YNL035CP53962 389 aaKnown RBP11.95□□□□□ -0.5
CLB6YGR109C MGM1P32266 881 aa11.94□□□□□ -0.5
CLB6YGR109C NUD1P32336 851 aa11.94□□□□□ -0.5
CLB6YGR109C SLD2P34252 453 aa11.94□□□□□ -0.5
CLB6YGR109C PUS6P53294 404 aa11.94□□□□□ -0.5
CLB6YGR109C CRF1Q04930 467 aa11.94□□□□□ -0.5
CLB6YGR109C NCB2Q92317 146 aa11.94□□□□□ -0.5
CLB6YGR109C PMD1P32634 1753 aa11.94□□□□□ -0.5
CLB6YGR109C TGL4P36165 910 aa11.93□□□□□ -0.5
CLB6YGR109C FPR3P38911 411 aaKnown RBP11.93□□□□□ -0.5
CLB6YGR109C SPO1P53541 631 aa11.93□□□□□ -0.5
CLB6YGR109C GCD7P32502 381 aaPredicted RBP11.92□□□□□ -0.5
CLB6YGR109C IOC2Q12072 812 aa11.92□□□□□ -0.5
CLB6YGR109C RPT4P53549 437 aaKnown RBP11.91□□□□□ -0.5
CLB6YGR109C SPP1Q03012 353 aa11.91□□□□□ -0.5
CLB6YGR109C PUF6Q04373 656 aaKnown RBP11.91□□□□□ -0.5
CLB6YGR109C RRG1Q12167 365 aaPredicted RBP11.91□□□□□ -0.5
CLB6YGR109C MCM16Q12262 181 aa11.91□□□□□ -0.5
CLB6YGR109C ADR1P07248 1323 aa11.9□□□□□ -0.5
CLB6YGR109C NMA111P53920 997 aa11.9□□□□□ -0.5
CLB6YGR109C TBF1Q02457 562 aa11.9□□□□□ -0.5
CLB6YGR109C ERF2Q06551 359 aa11.9□□□□□ -0.5
CLB6YGR109C SPL2P38839 148 aa11.89□□□□□ -0.51
CLB6YGR109C POL32P47110 350 aa11.89□□□□□ -0.51
CLB6YGR109C TIM50Q02776 476 aa11.89□□□□□ -0.51
CLB6YGR109C POM152P39685 1337 aa11.88□□□□□ -0.51
CLB6YGR109C THS1P04801 734 aaKnown RBP11.88□□□□□ -0.51
CLB6YGR109C PIF1P07271 859 aa11.88□□□□□ -0.51
CLB6YGR109C PEP12P32854 288 aa11.88□□□□□ -0.51
CLB6YGR109C JJJ2P46997 583 aa11.88□□□□□ -0.51
CLB6YGR109C PRP42Q03776 544 aaKnown RBP11.88□□□□□ -0.51
CLB6YGR109C HXT10P43581 546 aa11.86□□□□□ -0.51
CLB6YGR109C RRI2Q12348 645 aa11.86□□□□□ -0.51
CLB6YGR109C RDS2P19541 446 aaKnown RBP11.85□□□□□ -0.51
CLB6YGR109C AFG2P32794 780 aa11.85□□□□□ -0.51
CLB6YGR109C FUN12P39730 1002 aaKnown RBP11.85□□□□□ -0.51
CLB6YGR109C SEN54Q02825 467 aaPredicted RBP11.85□□□□□ -0.51
CLB6YGR109C IRC4Q03036 179 aa11.85□□□□□ -0.51
CLB6YGR109C ACK1Q07622 623 aaPredicted RBP11.85□□□□□ -0.51
CLB6YGR109C YLR278CQ05854 1341 aa11.85□□□□□ -0.51
CLB6YGR109C SEC18P18759 758 aaKnown RBP11.84□□□□□ -0.51
CLB6YGR109C NPL4P33755 580 aa11.84□□□□□ -0.51
CLB6YGR109C NMD2P38798 1089 aaKnown RBP11.84□□□□□ -0.51
CLB6YGR109C TRM44Q02648 567 aaKnown RBP11.84□□□□□ -0.51
CLB6YGR109C PUS5Q06244 254 aa11.84□□□□□ -0.51
CLB6YGR109C LCB1P25045 558 aaKnown RBP11.83□□□□□ -0.52
CLB6YGR109C RTG1P32607 177 aa11.83□□□□□ -0.52
CLB6YGR109C FET4P40988 552 aa11.83□□□□□ -0.52
CLB6YGR109C SEC61P32915 480 aa11.82□□□□□ -0.52
CLB6YGR109C YGR117CP53270 476 aa11.82□□□□□ -0.52
CLB6YGR109C ECM16Q04217 1267 aaKnown RBP11.82□□□□□ -0.52
CLB6YGR109C WRS1Q12109 432 aaKnown RBP11.82□□□□□ -0.52
CLB6YGR109C HKR1P41809 1802 aa11.81□□□□□ -0.52
CLB6YGR109C PDR1P12383 1068 aa11.81□□□□□ -0.52
CLB6YGR109C GSM1P42950 618 aa11.81□□□□□ -0.52
CLB6YGR109C GAS5Q08193 484 aa11.81□□□□□ -0.52
CLB6YGR109C YDL206WQ12424 762 aa11.81□□□□□ -0.52
CLB6YGR109C KTR7P40504 517 aa11.8□□□□□ -0.52
CLB6YGR109C YFH7P43591 353 aa11.8□□□□□ -0.52
CLB6YGR109C BDP1P46678 594 aa11.8□□□□□ -0.52
CLB6YGR109C ARG82P07250 355 aa11.79□□□□□ -0.52
CLB6YGR109C EMP47P43555 445 aa11.79□□□□□ -0.52
CLB6YGR109C STR2P47164 639 aa11.79□□□□□ -0.52
CLB6YGR109C MLC1P53141 149 aa11.79□□□□□ -0.52
CLB6YGR109C ECM23Q02710 187 aa11.79□□□□□ -0.52
CLB6YGR109C LDB19Q12502 818 aa11.79□□□□□ -0.52
CLB6YGR109C ISF1P32488 338 aa11.78□□□□□ -0.52
CLB6YGR109C ISM1P48526 1002 aa11.78□□□□□ -0.52
CLB6YGR109C YGL242CP53066 181 aa11.78□□□□□ -0.52
CLB6YGR109C FAS2P19097 1887 aaKnown RBP11.78□□□□□ -0.52
CLB6YGR109C HPR1P17629 752 aaKnown RBP11.77□□□□□ -0.53
CLB6YGR109C GLO3P38682 493 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 5,963 RNA–protein pairs in 67.7 ms