RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeastyeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC9YGR009C BUD14P27637 709 aa5.43□□□□□ -1.54
SEC9YGR009C ZUO1P32527 433 aaKnown RBP5.43□□□□□ -1.54
SEC9YGR009C BDF1P35817 686 aa5.43□□□□□ -1.54
SEC9YGR009C GTT3P39996 337 aa5.43□□□□□ -1.54
SEC9YGR009C PXA1P41909 870 aa5.43□□□□□ -1.54
SEC9YGR009C ENP2P48234 707 aaKnown RBP5.43□□□□□ -1.54
SEC9YGR009C YBL111CQ3E7Y5 667 aa5.43□□□□□ -1.54
SEC9YGR009C SSK22P25390 1331 aaPredicted RBP5.42□□□□□ -1.54
SEC9YGR009C PMS1P14242 873 aa5.42□□□□□ -1.54
SEC9YGR009C PGS1P25578 521 aa5.42□□□□□ -1.54
SEC9YGR009C SWC3P31376 625 aa5.42□□□□□ -1.54
SEC9YGR009C SMY2P32909 740 aaKnown RBP5.42□□□□□ -1.54
SEC9YGR009C PEX6P33760 1030 aa5.42□□□□□ -1.54
SEC9YGR009C SKI2P35207 1287 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
SEC9YGR009C CCL1P37366 393 aa5.42□□□□□ -1.54
SEC9YGR009C UBP13P38187 747 aa5.42□□□□□ -1.54
SEC9YGR009C YBL028CP38202 106 aa5.42□□□□□ -1.54
SEC9YGR009C BIM1P40013 344 aa5.42□□□□□ -1.54
SEC9YGR009C DAK2P43550 591 aa5.42□□□□□ -1.54
SEC9YGR009C DAS1P47005 663 aa5.42□□□□□ -1.54
SEC9YGR009C ATP22P50273 684 aaPredicted RBP5.42□□□□□ -1.54
SEC9YGR009C EFM5P53200 248 aaKnown RBP5.42□□□□□ -1.54
SEC9YGR009C PEX8P53248 589 aa5.42□□□□□ -1.54
SEC9YGR009C RTC4P53850 401 aa5.42□□□□□ -1.54
SEC9YGR009C LAP3Q01532 483 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
SEC9YGR009C SKI3P17883 1432 aaKnown RBP5.42□□□□□ -1.54
SEC9YGR009C PRT1P06103 763 aaKnown RBP5.42□□□□□ -1.54
SEC9YGR009C MRC1P25588 1096 aa5.42□□□□□ -1.54
SEC9YGR009C MTC2P34246 357 aa5.42□□□□□ -1.54
SEC9YGR009C RTG3P38165 486 aa5.42□□□□□ -1.54
SEC9YGR009C HSM3P38348 480 aa5.42□□□□□ -1.54
SEC9YGR009C MNN1P39106 762 aa5.42□□□□□ -1.54
SEC9YGR009C CHZ1P40019 153 aaPredicted RBP5.42□□□□□ -1.54
SEC9YGR009C YEN1P40028 759 aa5.42□□□□□ -1.54
SEC9YGR009C FMP10P40098 244 aa5.42□□□□□ -1.54
SEC9YGR009C ATG32P40458 529 aa5.42□□□□□ -1.54
SEC9YGR009C VPS20Q04272 221 aa5.42□□□□□ -1.54
SEC9YGR009C SPO20Q04359 397 aa5.42□□□□□ -1.54
SEC9YGR009C ORM2Q06144 216 aa5.42□□□□□ -1.54
SEC9YGR009C YPR097WQ06839 1073 aa5.42□□□□□ -1.54
SEC9YGR009C YOR352WQ08816 343 aa5.42□□□□□ -1.54
SEC9YGR009C RAD27P26793 382 aa5.41□□□□□ -1.54
SEC9YGR009C SNF7P39929 240 aaKnown RBP5.41□□□□□ -1.54
SEC9YGR009C SSQ1Q05931 657 aaPredicted RBP5.41□□□□□ -1.54
SEC9YGR009C ARR2Q06597 130 aa5.41□□□□□ -1.54
SEC9YGR009C MCD1Q12158 566 aa5.41□□□□□ -1.54
SEC9YGR009C MSB4Q12317 492 aa5.41□□□□□ -1.54
SEC9YGR009C PBS2P08018 668 aa5.4□□□□□ -1.54
SEC9YGR009C RAD4P14736 754 aa5.4□□□□□ -1.54
SEC9YGR009C ATE1P16639 503 aa5.4□□□□□ -1.54
SEC9YGR009C KIP2P28743 706 aa5.4□□□□□ -1.54
SEC9YGR009C PUP2P32379 260 aa5.4□□□□□ -1.54
SEC9YGR009C TIF3P34167 436 aaKnown RBP5.4□□□□□ -1.54
SEC9YGR009C TBS1P38114 1094 aa5.4□□□□□ -1.54
SEC9YGR009C FOL1P53848 824 aa5.4□□□□□ -1.54
SEC9YGR009C VPS30Q02948 557 aa5.4□□□□□ -1.54
SEC9YGR009C YDR286CQ05530 114 aa5.4□□□□□ -1.54
SEC9YGR009C SLX4Q12098 748 aa5.4□□□□□ -1.54
SEC9YGR009C WHI5Q12416 295 aa5.4□□□□□ -1.54
SEC9YGR009C STE11P23561 717 aa5.4□□□□□ -1.55
SEC9YGR009C PSE1P32337 1089 aaKnown RBP5.4□□□□□ -1.55
SEC9YGR009C DPH5P32469 300 aaPredicted RBP5.4□□□□□ -1.55
SEC9YGR009C TAF5P38129 798 aa5.4□□□□□ -1.55
SEC9YGR009C CIC1P38779 376 aaKnown RBP5.4□□□□□ -1.55
SEC9YGR009C SET1P38827 1080 aaKnown RBP5.4□□□□□ -1.55
SEC9YGR009C FTR1P40088 404 aa5.4□□□□□ -1.55
SEC9YGR009C VTC2P43585 828 aa5.4□□□□□ -1.55
SEC9YGR009C UTP14Q04500 899 aaKnown RBP5.4□□□□□ -1.55
SEC9YGR009C ERB1Q04660 807 aaKnown RBP5.4□□□□□ -1.55
SEC9YGR009C BDF2Q07442 638 aa5.4□□□□□ -1.55
SEC9YGR009C ALR1Q08269 859 aa5.4□□□□□ -1.55
SEC9YGR009C SLK19Q08581 821 aaKnown RBP5.4□□□□□ -1.55
SEC9YGR009C PGC1Q08959 321 aa5.4□□□□□ -1.55
SEC9YGR009C SEC15P22224 910 aa5.39□□□□□ -1.55
SEC9YGR009C CDC60P26637 1090 aaKnown RBP5.39□□□□□ -1.55
SEC9YGR009C CPS1P27614 576 aa5.39□□□□□ -1.55
SEC9YGR009C YKL050CP35736 922 aa5.39□□□□□ -1.55
SEC9YGR009C ATG14P38270 344 aa5.39□□□□□ -1.55
SEC9YGR009C CCT3P39077 534 aaKnown RBP5.39□□□□□ -1.55
SEC9YGR009C RSM7P47150 247 aa5.39□□□□□ -1.55
SEC9YGR009C ALF1P53904 254 aa5.39□□□□□ -1.55
SEC9YGR009C ERO1Q03103 563 aa5.39□□□□□ -1.55
SEC9YGR009C RSM28Q03430 361 aa5.39□□□□□ -1.55
SEC9YGR009C GIC2Q06648 383 aa5.39□□□□□ -1.55
SEC9YGR009C PET494P07390 489 aaPredicted RBP5.38□□□□□ -1.55
SEC9YGR009C NOP4P37838 685 aaKnown RBP5.38□□□□□ -1.55
SEC9YGR009C SDA1P53313 767 aaKnown RBP5.38□□□□□ -1.55
SEC9YGR009C YDL073WQ07454 984 aa5.38□□□□□ -1.55
SEC9YGR009C RGP1P16664 663 aa5.38□□□□□ -1.55
SEC9YGR009C DIT1P21623 536 aa5.38□□□□□ -1.55
SEC9YGR009C NDE1P40215 560 aa5.38□□□□□ -1.55
SEC9YGR009C SEC26P41810 973 aaKnown RBP5.38□□□□□ -1.55
SEC9YGR009C BBC1P47068 1157 aa5.38□□□□□ -1.55
SEC9YGR009C VTC4P47075 721 aa5.38□□□□□ -1.55
SEC9YGR009C SHE4P51534 789 aa5.38□□□□□ -1.55
SEC9YGR009C MSN5P52918 1224 aa5.38□□□□□ -1.55
SEC9YGR009C PXR1P53335 271 aaPredicted RBP5.38□□□□□ -1.55
SEC9YGR009C NNT1Q05874 261 aa5.38□□□□□ -1.55
SEC9YGR009C MAK21Q12176 1025 aaKnown RBP5.38□□□□□ -1.55
SEC9YGR009C MCM3P24279 971 aaKnown RBP5.37□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms