RNA–Protein interactions for RNA: YGL099W

LSG1, Transcript of Putative GTPase involved in 60S ribosomal subunit biogenesis, yeastyeast

Gene LSG1, Length 1,923 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSG1YGL099W CDC60P26637 1090 aaKnown RBP6.42□□□□□ -1.38
LSG1YGL099W SWC3P31376 625 aa6.42□□□□□ -1.38
LSG1YGL099W ACP1P32463 125 aa6.42□□□□□ -1.38
LSG1YGL099W LHS1P36016 881 aa6.42□□□□□ -1.38
LSG1YGL099W CAT8P39113 1433 aa6.42□□□□□ -1.38
LSG1YGL099W BDH2P39713 417 aa6.42□□□□□ -1.38
LSG1YGL099W VID28P40547 921 aa6.42□□□□□ -1.38
LSG1YGL099W HST1P53685 503 aa6.42□□□□□ -1.38
LSG1YGL099W CUS1Q02554 436 aaPredicted RBP6.42□□□□□ -1.38
LSG1YGL099W PLP1Q04004 230 aa6.42□□□□□ -1.38
LSG1YGL099W JIP5Q06214 492 aaPredicted RBP6.42□□□□□ -1.38
LSG1YGL099W MET7Q08645 548 aa6.42□□□□□ -1.38
LSG1YGL099W CEX1Q12453 761 aa6.42□□□□□ -1.38
LSG1YGL099W SMC6Q12749 1114 aa6.42□□□□□ -1.38
LSG1YGL099W ESP1Q03018 1630 aa6.41□□□□□ -1.38
LSG1YGL099W KRS1P15180 591 aaKnown RBP6.41□□□□□ -1.38
LSG1YGL099W GAL11P19659 1081 aa6.41□□□□□ -1.38
LSG1YGL099W ECM4P36156 370 aa6.41□□□□□ -1.38
LSG1YGL099W SRL3P36167 246 aa6.41□□□□□ -1.38
LSG1YGL099W MMR1Q06324 491 aa6.41□□□□□ -1.38
LSG1YGL099W RAM2P29703 316 aa6.4□□□□□ -1.38
LSG1YGL099W SMY2P32909 740 aaKnown RBP6.4□□□□□ -1.38
LSG1YGL099W MRPL10P36520 322 aa6.4□□□□□ -1.38
LSG1YGL099W KEL2P50090 882 aa6.4□□□□□ -1.38
LSG1YGL099W OCA1P50946 238 aaPredicted RBP6.4□□□□□ -1.38
LSG1YGL099W DMA2P53924 522 aa6.4□□□□□ -1.38
LSG1YGL099W BET4Q00618 327 aa6.4□□□□□ -1.38
LSG1YGL099W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.4□□□□□ -1.38 RIP-Chip
LSG1YGL099W VAM6Q07468 1049 aa6.4□□□□□ -1.38
LSG1YGL099W HMI1Q12039 706 aa6.4□□□□□ -1.38
LSG1YGL099W GNT1Q12096 491 aa6.4□□□□□ -1.38
LSG1YGL099W SWR1Q05471 1514 aa6.4□□□□□ -1.38
LSG1YGL099W SUI3P09064 285 aaKnown RBP6.4□□□□□ -1.39
LSG1YGL099W NPL4P33755 580 aa6.4□□□□□ -1.39
LSG1YGL099W VPS29P38759 282 aa6.4□□□□□ -1.39
LSG1YGL099W SDA1P53313 767 aaKnown RBP6.4□□□□□ -1.39
LSG1YGL099W ELA1P53861 379 aaPredicted RBP6.4□□□□□ -1.39
LSG1YGL099W FAR11P53917 953 aa6.4□□□□□ -1.39
LSG1YGL099W NOP15P53927 220 aaPredicted RBP6.4□□□□□ -1.39
LSG1YGL099W SSL2Q00578 843 aa6.4□□□□□ -1.39
LSG1YGL099W NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.4□□□□□ -1.39not detected
LSG1YGL099W FUS2Q05670 677 aa6.4□□□□□ -1.39
LSG1YGL099W SMD2Q06217 110 aaKnown RBP6.4□□□□□ -1.39
LSG1YGL099W CLP1Q08685 445 aaPredicted RBP6.4□□□□□ -1.39
LSG1YGL099W BUD7Q08754 746 aa6.4□□□□□ -1.39
LSG1YGL099W SWI1P09547 1314 aa6.39□□□□□ -1.39
LSG1YGL099W PRT1P06103 763 aaKnown RBP6.39□□□□□ -1.39
LSG1YGL099W SPE2P21182 396 aa6.39□□□□□ -1.39
LSG1YGL099W PAP1P29468 568 aaKnown RBP6.39□□□□□ -1.39
LSG1YGL099W DLD1P32891 587 aa6.39□□□□□ -1.39
LSG1YGL099W NUP120P35729 1037 aa6.39□□□□□ -1.39
LSG1YGL099W HSM3P38348 480 aa6.39□□□□□ -1.39
LSG1YGL099W SSF1P38789 453 aaPredicted RBP6.39□□□□□ -1.39
LSG1YGL099W NPA3P47122 385 aa6.39□□□□□ -1.39
LSG1YGL099W SRC1Q03707 834 aa6.39□□□□□ -1.39
LSG1YGL099W PUF6Q04373 656 aaKnown RBP6.39□□□□□ -1.39
LSG1YGL099W PMT7Q06644 662 aa6.39□□□□□ -1.39
LSG1YGL099W NUP60P39705 539 aa6.38□□□□□ -1.39
LSG1YGL099W ATG3P40344 310 aa6.38□□□□□ -1.39
LSG1YGL099W RSM25P40496 264 aa6.38□□□□□ -1.39
LSG1YGL099W BUD27P43573 796 aaKnown RBP RIP-Chip data6.38□□□□□ -1.39not detected
LSG1YGL099W ECL1P48235 211 aa6.38□□□□□ -1.39
LSG1YGL099W YNL058CP53947 316 aa6.38□□□□□ -1.39
LSG1YGL099W SEC5P89102 971 aa6.38□□□□□ -1.39
LSG1YGL099W SPN1Q06505 410 aaPredicted RBP6.38□□□□□ -1.39
LSG1YGL099W TY4A-HQ6Q5P6 413 aa6.38□□□□□ -1.39
LSG1YGL099W ADH4P10127 382 aa6.38□□□□□ -1.39
LSG1YGL099W PUF4P25339 888 aaKnown RBP RIP-Chip data6.38□□□□□ -1.39not detected
LSG1YGL099W RPN2P32565 945 aaKnown RBP6.38□□□□□ -1.39
LSG1YGL099W APD1P38281 316 aa6.38□□□□□ -1.39
LSG1YGL099W SYG1P40528 902 aa6.38□□□□□ -1.39
LSG1YGL099W BFA1P47113 574 aa6.38□□□□□ -1.39
LSG1YGL099W CAF130P53280 1122 aaPredicted RBP6.38□□□□□ -1.39
LSG1YGL099W CTF4Q01454 927 aa6.38□□□□□ -1.39
LSG1YGL099W YML108WQ03759 105 aa6.38□□□□□ -1.39
LSG1YGL099W ABP140Q08641 628 aaKnown RBP6.38□□□□□ -1.39
LSG1YGL099W APC11Q12157 165 aa6.38□□□□□ -1.39
LSG1YGL099W DRS2P39524 1355 aa6.38□□□□□ -1.39
LSG1YGL099W NIP100P33420 868 aa6.37□□□□□ -1.39
LSG1YGL099W DID4P36108 232 aa6.37□□□□□ -1.39
LSG1YGL099W CWH41P53008 833 aa6.37□□□□□ -1.39
LSG1YGL099W LSC1P53598 329 aaKnown RBP6.37□□□□□ -1.39
LSG1YGL099W ESF2P53743 316 aaKnown RBP6.37□□□□□ -1.39
LSG1YGL099W YKU80Q04437 629 aa6.37□□□□□ -1.39
LSG1YGL099W DPL1Q05567 589 aa6.37□□□□□ -1.39
LSG1YGL099W STE6P12866 1290 aa6.37□□□□□ -1.39
LSG1YGL099W PRP16P15938 1071 aaPredicted RBP6.37□□□□□ -1.39
LSG1YGL099W CLB4P24871 460 aa6.37□□□□□ -1.39
LSG1YGL099W PHO84P25297 587 aaKnown RBP6.37□□□□□ -1.39
LSG1YGL099W SAK1P38990 1142 aa6.37□□□□□ -1.39
LSG1YGL099W COG4Q06096 861 aa6.37□□□□□ -1.39
LSG1YGL099W TSR2Q06672 205 aaKnown RBP6.37□□□□□ -1.39
LSG1YGL099W HIS3P06633 220 aa6.36□□□□□ -1.39
LSG1YGL099W SES1P07284 462 aaKnown RBP6.36□□□□□ -1.39
LSG1YGL099W TUP1P16649 713 aa6.36□□□□□ -1.39
LSG1YGL099W STE11P23561 717 aa6.36□□□□□ -1.39
LSG1YGL099W HCS1P34243 683 aa6.36□□□□□ -1.39
LSG1YGL099W SIP3P38717 1229 aa6.36□□□□□ -1.39
LSG1YGL099W PES4P39684 611 aa6.36□□□□□ -1.39
LSG1YGL099W FAF1P40546 346 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 7.1 ms