RNA–Protein interactions for RNA: YER164W

CHD1, Transcript of Chromatin remodeler that regulates various aspects of transcription, yeastyeast

Gene CHD1, Length 4,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHD1YER164W RPL19AP0CX82 189 aaKnown RBP4.22□□□□□ -1.73
CHD1YER164W RPL19BP0CX83 189 aaPredicted RBP4.22□□□□□ -1.73
CHD1YER164W SAC6P32599 642 aaKnown RBP4.22□□□□□ -1.73
CHD1YER164W RRM3P38766 723 aa4.22□□□□□ -1.73
CHD1YER164W HAL5P38970 855 aaKnown RBP4.22□□□□□ -1.73
CHD1YER164W CEP3P40969 608 aa4.22□□□□□ -1.73
CHD1YER164W CIR1P42940 261 aa4.22□□□□□ -1.73
CHD1YER164W PTK2P47116 818 aaKnown RBP4.22□□□□□ -1.73
CHD1YER164W VPS30Q02948 557 aa4.22□□□□□ -1.73
CHD1YER164W CHO2P05374 869 aaKnown RBP4.21□□□□□ -1.74
CHD1YER164W MCM2P29469 868 aa4.21□□□□□ -1.74
CHD1YER164W OLA1P38219 394 aaKnown RBP4.21□□□□□ -1.74
CHD1YER164W EPL1P43572 832 aa4.21□□□□□ -1.74
CHD1YER164W MLC1P53141 149 aa4.21□□□□□ -1.74
CHD1YER164W ENV11P53246 860 aa4.21□□□□□ -1.74
CHD1YER164W JJJ1P53863 590 aa4.21□□□□□ -1.74
CHD1YER164W TSR1Q07381 788 aaKnown RBP4.21□□□□□ -1.74
CHD1YER164W THI3Q07471 609 aa4.21□□□□□ -1.74
CHD1YER164W SUP35P05453 685 aaKnown RBP4.21□□□□□ -1.74
CHD1YER164W RIO2P40160 425 aaKnown RBP4.21□□□□□ -1.74
CHD1YER164W FYV8P46949 817 aaKnown RBP4.21□□□□□ -1.74
CHD1YER164W BRE1Q07457 700 aaKnown RBP4.21□□□□□ -1.74
CHD1YER164W RLP24Q07915 199 aaKnown RBP4.21□□□□□ -1.74
CHD1YER164W RRI2Q12348 645 aa4.21□□□□□ -1.74
CHD1YER164W SPT21P35209 758 aa4.21□□□□□ -1.74
CHD1YER164W SIP3P38717 1229 aa4.21□□□□□ -1.74
CHD1YER164W NAB3P38996 802 aaKnown RBP RIP-Chip data4.21□□□□□ -1.74not detected
CHD1YER164W SPO19Q03029 223 aa4.21□□□□□ -1.74
CHD1YER164W CDC37P06101 506 aaKnown RBP4.2□□□□□ -1.74
CHD1YER164W LAM4P38800 1345 aa4.2□□□□□ -1.74
CHD1YER164W TRS33Q99394 268 aa4.2□□□□□ -1.74
CHD1YER164W SPL2P38839 148 aa4.2□□□□□ -1.74
CHD1YER164W CTH1P47976 325 aa4.2□□□□□ -1.74
CHD1YER164W TLG2Q08144 397 aa4.2□□□□□ -1.74
CHD1YER164W NOP14Q99207 810 aaKnown RBP4.2□□□□□ -1.74
CHD1YER164W VPS13Q07878 3144 aa4.2□□□□□ -1.74
CHD1YER164W FRD1P32614 470 aaKnown RBP4.2□□□□□ -1.74
CHD1YER164W SSF1P38789 453 aaPredicted RBP4.2□□□□□ -1.74
CHD1YER164W CCT5P40413 562 aaKnown RBP4.2□□□□□ -1.74
CHD1YER164W SEC27P41811 889 aaKnown RBP4.2□□□□□ -1.74
CHD1YER164W APT1P49435 187 aaKnown RBP4.2□□□□□ -1.74
CHD1YER164W TOS4Q06266 489 aa4.2□□□□□ -1.74
CHD1YER164W RIM15P43565 1770 aa4.19□□□□□ -1.74
CHD1YER164W FRS2P15625 503 aaKnown RBP4.19□□□□□ -1.74
CHD1YER164W MGM1P32266 881 aa4.19□□□□□ -1.74
CHD1YER164W GSM1P42950 618 aa4.19□□□□□ -1.74
CHD1YER164W INM2Q05533 292 aa4.19□□□□□ -1.74
CHD1YER164W YOL098CQ12496 1037 aa4.19□□□□□ -1.74
CHD1YER164W CPA2P03965 1118 aaKnown RBP4.19□□□□□ -1.74
CHD1YER164W HCA4P20448 770 aaKnown RBP4.19□□□□□ -1.74
CHD1YER164W NFU1P32860 256 aa4.19□□□□□ -1.74
CHD1YER164W GRX7P38068 203 aa4.19□□□□□ -1.74
CHD1YER164W VPS41P38959 992 aa4.19□□□□□ -1.74
CHD1YER164W BUD6P41697 788 aa4.19□□□□□ -1.74
CHD1YER164W SFB2P53953 876 aa4.19□□□□□ -1.74
CHD1YER164W MSH3P25336 1018 aa4.19□□□□□ -1.74
CHD1YER164W BUD31P25337 157 aaPredicted RBP4.19□□□□□ -1.74
CHD1YER164W SGM1P47166 707 aa4.19□□□□□ -1.74
CHD1YER164W RPT4P53549 437 aaKnown RBP4.19□□□□□ -1.74
CHD1YER164W PLP2Q12017 286 aa4.19□□□□□ -1.74
CHD1YER164W NBL1Q3E7Y6 73 aa4.18□□□□□ -1.74
CHD1YER164W RDS1P25611 832 aa4.18□□□□□ -1.74
CHD1YER164W GLN1P32288 370 aaKnown RBP4.18□□□□□ -1.74
CHD1YER164W MNR2P35724 969 aa4.18□□□□□ -1.74
CHD1YER164W GLO3P38682 493 aaKnown RBP4.18□□□□□ -1.74
CHD1YER164W TOM71P38825 639 aaKnown RBP4.18□□□□□ -1.74
CHD1YER164W PKH3Q03306 898 aaPredicted RBP4.18□□□□□ -1.74
CHD1YER164W UTP10P42945 1769 aaKnown RBP4.18□□□□□ -1.74
CHD1YER164W PRX1P34227 261 aaKnown RBP4.18□□□□□ -1.74
CHD1YER164W RKM3P38222 552 aa4.18□□□□□ -1.74
CHD1YER164W SET4P42948 560 aa4.18□□□□□ -1.74
CHD1YER164W MTC5Q03897 1148 aa4.18□□□□□ -1.74
CHD1YER164W PEX19Q07418 342 aa4.18□□□□□ -1.74
CHD1YER164W HAT1Q12341 374 aa4.18□□□□□ -1.74
CHD1YER164W SWI3P32591 825 aa4.18□□□□□ -1.74
CHD1YER164W REI1P38344 393 aaPredicted RBP4.18□□□□□ -1.74
CHD1YER164W CIN4P39110 191 aa4.18□□□□□ -1.74
CHD1YER164W HPC2Q01448 625 aa4.18□□□□□ -1.74
CHD1YER164W MRS2Q01926 470 aa4.18□□□□□ -1.74
CHD1YER164W SSA2P10592 639 aaKnown RBP4.17□□□□□ -1.74
CHD1YER164W SSE1P32589 693 aaKnown RBP4.17□□□□□ -1.74
CHD1YER164W FYV10P40492 516 aa4.17□□□□□ -1.74
CHD1YER164W NSG2P53898 299 aa4.17□□□□□ -1.74
CHD1YER164W LCB5Q06147 687 aaKnown RBP4.17□□□□□ -1.74
CHD1YER164W SLK19Q08581 821 aaKnown RBP4.17□□□□□ -1.74
CHD1YER164W PMD1P32634 1753 aa4.17□□□□□ -1.74
CHD1YER164W RPS0AP32905 252 aaKnown RBP4.17□□□□□ -1.74
CHD1YER164W RFC5P38251 354 aa4.17□□□□□ -1.74
CHD1YER164W BDH2P39713 417 aa4.17□□□□□ -1.74
CHD1YER164W SAP1P39955 897 aaKnown RBP4.17□□□□□ -1.74
CHD1YER164W SRC1Q03707 834 aa4.17□□□□□ -1.74
CHD1YER164W PPM2Q08282 695 aa4.17□□□□□ -1.74
CHD1YER164W OSH2Q12451 1283 aa4.17□□□□□ -1.74
CHD1YER164W COQ1P18900 473 aa4.17□□□□□ -1.74
CHD1YER164W CDC3P32457 520 aaKnown RBP4.17□□□□□ -1.74
CHD1YER164W BYE1P36106 594 aa4.17□□□□□ -1.74
CHD1YER164W YSH1Q06224 779 aaPredicted RBP4.17□□□□□ -1.74
CHD1YER164W NKP1Q12493 238 aa4.17□□□□□ -1.74
CHD1YER164W VPS1P21576 704 aaKnown RBP4.16□□□□□ -1.74
CHD1YER164W SEC26P41810 973 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 192.1 ms