RNA–Protein interactions for RNA: YER164W

CHD1, Transcript of Chromatin remodeler that regulates various aspects of transcription, yeast

Gene CHD1, Length 4,407 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHD1	YER164W	RPL19A	P0CX82	189 aa	Known RBP	4.22	□□□□□ -1.73
CHD1	YER164W	RPL19B	P0CX83	189 aa	Predicted RBP	4.22	□□□□□ -1.73
CHD1	YER164W	SAC6	P32599	642 aa	Known RBP	4.22	□□□□□ -1.73
CHD1	YER164W	RRM3	P38766	723 aa		4.22	□□□□□ -1.73
CHD1	YER164W	HAL5	P38970	855 aa	Known RBP	4.22	□□□□□ -1.73
CHD1	YER164W	CEP3	P40969	608 aa		4.22	□□□□□ -1.73
CHD1	YER164W	CIR1	P42940	261 aa		4.22	□□□□□ -1.73
CHD1	YER164W	PTK2	P47116	818 aa	Known RBP	4.22	□□□□□ -1.73
CHD1	YER164W	VPS30	Q02948	557 aa		4.22	□□□□□ -1.73
CHD1	YER164W	CHO2	P05374	869 aa	Known RBP	4.21	□□□□□ -1.74
CHD1	YER164W	MCM2	P29469	868 aa		4.21	□□□□□ -1.74
CHD1	YER164W	OLA1	P38219	394 aa	Known RBP	4.21	□□□□□ -1.74
CHD1	YER164W	EPL1	P43572	832 aa		4.21	□□□□□ -1.74
CHD1	YER164W	MLC1	P53141	149 aa		4.21	□□□□□ -1.74
CHD1	YER164W	ENV11	P53246	860 aa		4.21	□□□□□ -1.74
CHD1	YER164W	JJJ1	P53863	590 aa		4.21	□□□□□ -1.74
CHD1	YER164W	TSR1	Q07381	788 aa	Known RBP	4.21	□□□□□ -1.74
CHD1	YER164W	THI3	Q07471	609 aa		4.21	□□□□□ -1.74
CHD1	YER164W	SUP35	P05453	685 aa	Known RBP	4.21	□□□□□ -1.74
CHD1	YER164W	RIO2	P40160	425 aa	Known RBP	4.21	□□□□□ -1.74
CHD1	YER164W	FYV8	P46949	817 aa	Known RBP	4.21	□□□□□ -1.74
CHD1	YER164W	BRE1	Q07457	700 aa	Known RBP	4.21	□□□□□ -1.74
CHD1	YER164W	RLP24	Q07915	199 aa	Known RBP	4.21	□□□□□ -1.74
CHD1	YER164W	RRI2	Q12348	645 aa		4.21	□□□□□ -1.74
CHD1	YER164W	SPT21	P35209	758 aa		4.21	□□□□□ -1.74
CHD1	YER164W	SIP3	P38717	1229 aa		4.21	□□□□□ -1.74
CHD1	YER164W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
CHD1	YER164W	SPO19	Q03029	223 aa		4.21	□□□□□ -1.74
CHD1	YER164W	CDC37	P06101	506 aa	Known RBP	4.2	□□□□□ -1.74
CHD1	YER164W	LAM4	P38800	1345 aa		4.2	□□□□□ -1.74
CHD1	YER164W	TRS33	Q99394	268 aa		4.2	□□□□□ -1.74
CHD1	YER164W	SPL2	P38839	148 aa		4.2	□□□□□ -1.74
CHD1	YER164W	CTH1	P47976	325 aa		4.2	□□□□□ -1.74
CHD1	YER164W	TLG2	Q08144	397 aa		4.2	□□□□□ -1.74
CHD1	YER164W	NOP14	Q99207	810 aa	Known RBP	4.2	□□□□□ -1.74
CHD1	YER164W	VPS13	Q07878	3144 aa		4.2	□□□□□ -1.74
CHD1	YER164W	FRD1	P32614	470 aa	Known RBP	4.2	□□□□□ -1.74
CHD1	YER164W	SSF1	P38789	453 aa	Predicted RBP	4.2	□□□□□ -1.74
CHD1	YER164W	CCT5	P40413	562 aa	Known RBP	4.2	□□□□□ -1.74
CHD1	YER164W	SEC27	P41811	889 aa	Known RBP	4.2	□□□□□ -1.74
CHD1	YER164W	APT1	P49435	187 aa	Known RBP	4.2	□□□□□ -1.74
CHD1	YER164W	TOS4	Q06266	489 aa		4.2	□□□□□ -1.74
CHD1	YER164W	RIM15	P43565	1770 aa		4.19	□□□□□ -1.74
CHD1	YER164W	FRS2	P15625	503 aa	Known RBP	4.19	□□□□□ -1.74
CHD1	YER164W	MGM1	P32266	881 aa		4.19	□□□□□ -1.74
CHD1	YER164W	GSM1	P42950	618 aa		4.19	□□□□□ -1.74
CHD1	YER164W	INM2	Q05533	292 aa		4.19	□□□□□ -1.74
CHD1	YER164W	YOL098C	Q12496	1037 aa		4.19	□□□□□ -1.74
CHD1	YER164W	CPA2	P03965	1118 aa	Known RBP	4.19	□□□□□ -1.74
CHD1	YER164W	HCA4	P20448	770 aa	Known RBP	4.19	□□□□□ -1.74
CHD1	YER164W	NFU1	P32860	256 aa		4.19	□□□□□ -1.74
CHD1	YER164W	GRX7	P38068	203 aa		4.19	□□□□□ -1.74
CHD1	YER164W	VPS41	P38959	992 aa		4.19	□□□□□ -1.74
CHD1	YER164W	BUD6	P41697	788 aa		4.19	□□□□□ -1.74
CHD1	YER164W	SFB2	P53953	876 aa		4.19	□□□□□ -1.74
CHD1	YER164W	MSH3	P25336	1018 aa		4.19	□□□□□ -1.74
CHD1	YER164W	BUD31	P25337	157 aa	Predicted RBP	4.19	□□□□□ -1.74
CHD1	YER164W	SGM1	P47166	707 aa		4.19	□□□□□ -1.74
CHD1	YER164W	RPT4	P53549	437 aa	Known RBP	4.19	□□□□□ -1.74
CHD1	YER164W	PLP2	Q12017	286 aa		4.19	□□□□□ -1.74
CHD1	YER164W	NBL1	Q3E7Y6	73 aa		4.18	□□□□□ -1.74
CHD1	YER164W	RDS1	P25611	832 aa		4.18	□□□□□ -1.74
CHD1	YER164W	GLN1	P32288	370 aa	Known RBP	4.18	□□□□□ -1.74
CHD1	YER164W	MNR2	P35724	969 aa		4.18	□□□□□ -1.74
CHD1	YER164W	GLO3	P38682	493 aa	Known RBP	4.18	□□□□□ -1.74
CHD1	YER164W	TOM71	P38825	639 aa	Known RBP	4.18	□□□□□ -1.74
CHD1	YER164W	PKH3	Q03306	898 aa	Predicted RBP	4.18	□□□□□ -1.74
CHD1	YER164W	UTP10	P42945	1769 aa	Known RBP	4.18	□□□□□ -1.74
CHD1	YER164W	PRX1	P34227	261 aa	Known RBP	4.18	□□□□□ -1.74
CHD1	YER164W	RKM3	P38222	552 aa		4.18	□□□□□ -1.74
CHD1	YER164W	SET4	P42948	560 aa		4.18	□□□□□ -1.74
CHD1	YER164W	MTC5	Q03897	1148 aa		4.18	□□□□□ -1.74
CHD1	YER164W	PEX19	Q07418	342 aa		4.18	□□□□□ -1.74
CHD1	YER164W	HAT1	Q12341	374 aa		4.18	□□□□□ -1.74
CHD1	YER164W	SWI3	P32591	825 aa		4.18	□□□□□ -1.74
CHD1	YER164W	REI1	P38344	393 aa	Predicted RBP	4.18	□□□□□ -1.74
CHD1	YER164W	CIN4	P39110	191 aa		4.18	□□□□□ -1.74
CHD1	YER164W	HPC2	Q01448	625 aa		4.18	□□□□□ -1.74
CHD1	YER164W	MRS2	Q01926	470 aa		4.18	□□□□□ -1.74
CHD1	YER164W	SSA2	P10592	639 aa	Known RBP	4.17	□□□□□ -1.74
CHD1	YER164W	SSE1	P32589	693 aa	Known RBP	4.17	□□□□□ -1.74
CHD1	YER164W	FYV10	P40492	516 aa		4.17	□□□□□ -1.74
CHD1	YER164W	NSG2	P53898	299 aa		4.17	□□□□□ -1.74
CHD1	YER164W	LCB5	Q06147	687 aa	Known RBP	4.17	□□□□□ -1.74
CHD1	YER164W	SLK19	Q08581	821 aa	Known RBP	4.17	□□□□□ -1.74
CHD1	YER164W	PMD1	P32634	1753 aa		4.17	□□□□□ -1.74
CHD1	YER164W	RPS0A	P32905	252 aa	Known RBP	4.17	□□□□□ -1.74
CHD1	YER164W	RFC5	P38251	354 aa		4.17	□□□□□ -1.74
CHD1	YER164W	BDH2	P39713	417 aa		4.17	□□□□□ -1.74
CHD1	YER164W	SAP1	P39955	897 aa	Known RBP	4.17	□□□□□ -1.74
CHD1	YER164W	SRC1	Q03707	834 aa		4.17	□□□□□ -1.74
CHD1	YER164W	PPM2	Q08282	695 aa		4.17	□□□□□ -1.74
CHD1	YER164W	OSH2	Q12451	1283 aa		4.17	□□□□□ -1.74
CHD1	YER164W	COQ1	P18900	473 aa		4.17	□□□□□ -1.74
CHD1	YER164W	CDC3	P32457	520 aa	Known RBP	4.17	□□□□□ -1.74
CHD1	YER164W	BYE1	P36106	594 aa		4.17	□□□□□ -1.74
CHD1	YER164W	YSH1	Q06224	779 aa	Predicted RBP	4.17	□□□□□ -1.74
CHD1	YER164W	NKP1	Q12493	238 aa		4.17	□□□□□ -1.74
CHD1	YER164W	VPS1	P21576	704 aa	Known RBP	4.16	□□□□□ -1.74
CHD1	YER164W	SEC26	P41810	973 aa	Known RBP	4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms