RNA–Protein interactions for RNA: YER151C

UBP3, Transcript of Ubiquitin-specific protease involved in transport and osmotic response, yeastyeast

Gene UBP3, Length 2,739 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP3YER151C PSH1Q12161 406 aa1.92□□□□□ -2.1
UBP3YER151C LEU3P08638 886 aa1.91□□□□□ -2.1
UBP3YER151C SAC7P17121 654 aa1.91□□□□□ -2.1
UBP3YER151C PGM2P37012 569 aaKnown RBP1.91□□□□□ -2.1
UBP3YER151C MSC7P38694 644 aa1.91□□□□□ -2.1
UBP3YER151C GLT1Q12680 2145 aaKnown RBP1.91□□□□□ -2.1
UBP3YER151C RSC6P25632 483 aa1.91□□□□□ -2.1
UBP3YER151C PDC6P26263 563 aaKnown RBP1.91□□□□□ -2.1
UBP3YER151C EMP47P43555 445 aa1.91□□□□□ -2.1
UBP3YER151C BUD9P53226 547 aa1.91□□□□□ -2.1
UBP3YER151C LEU1P07264 779 aaKnown RBP1.9□□□□□ -2.1
UBP3YER151C SPT5P27692 1063 aaKnown RBP1.9□□□□□ -2.1
UBP3YER151C MCM16Q12262 181 aa1.9□□□□□ -2.1
UBP3YER151C GUA1P38625 525 aaKnown RBP1.9□□□□□ -2.11
UBP3YER151C RRM3P38766 723 aa1.9□□□□□ -2.11
UBP3YER151C CHS2P14180 963 aa1.89□□□□□ -2.11
UBP3YER151C ALD2P47771 506 aa1.89□□□□□ -2.11
UBP3YER151C YGR130CP53278 816 aa1.89□□□□□ -2.11
UBP3YER151C HPC2Q01448 625 aa1.89□□□□□ -2.11
UBP3YER151C TFB3Q03290 321 aa1.89□□□□□ -2.11
UBP3YER151C HDA3Q06623 655 aa1.89□□□□□ -2.11
UBP3YER151C ISF1P32488 338 aa1.89□□□□□ -2.11
UBP3YER151C ATG3P40344 310 aa1.89□□□□□ -2.11
UBP3YER151C RQC2Q12532 1038 aaKnown RBP1.89□□□□□ -2.11
UBP3YER151C KIN1P13185 1064 aa1.89□□□□□ -2.11
UBP3YER151C YDJ1P25491 409 aaKnown RBP1.89□□□□□ -2.11
UBP3YER151C PGM1P33401 570 aaKnown RBP1.89□□□□□ -2.11
UBP3YER151C TAF7Q05021 590 aa1.89□□□□□ -2.11
UBP3YER151C BRE4Q07660 1125 aa1.89□□□□□ -2.11
UBP3YER151C POM152P39685 1337 aa1.88□□□□□ -2.11
UBP3YER151C TRP3P00937 484 aa1.88□□□□□ -2.11
UBP3YER151C SUP45P12385 437 aaKnown RBP1.88□□□□□ -2.11
UBP3YER151C PUB1P32588 453 aaKnown RBP RIP-Chip data1.88□□□□□ -2.11not detected
UBP3YER151C GAS5Q08193 484 aa1.88□□□□□ -2.11
UBP3YER151C URB1P34241 1764 aaKnown RBP1.88□□□□□ -2.11
UBP3YER151C RRP5Q05022 1729 aaKnown RBP1.88□□□□□ -2.11
UBP3YER151C SPT7P35177 1332 aa1.88□□□□□ -2.11
UBP3YER151C ARI1P53111 347 aaKnown RBP1.88□□□□□ -2.11
UBP3YER151C NUP157P40064 1391 aaKnown RBP1.87□□□□□ -2.11
UBP3YER151C AI3P03877 415 aa1.87□□□□□ -2.11
UBP3YER151C MCM1P11746 286 aa1.87□□□□□ -2.11
UBP3YER151C PKC1P24583 1151 aa1.87□□□□□ -2.11
UBP3YER151C YKR073CP36153 106 aa1.87□□□□□ -2.11
UBP3YER151C YNL165WP53891 406 aa1.87□□□□□ -2.11
UBP3YER151C SWI5P08153 709 aa1.87□□□□□ -2.11
UBP3YER151C RGP1P16664 663 aa1.87□□□□□ -2.11
UBP3YER151C RDS2P19541 446 aaKnown RBP1.87□□□□□ -2.11
UBP3YER151C AKR1P39010 764 aa1.87□□□□□ -2.11
UBP3YER151C HEH2Q03281 663 aa1.87□□□□□ -2.11
UBP3YER151C CYC7P00045 113 aa1.86□□□□□ -2.11
UBP3YER151C ELM1P32801 640 aa1.86□□□□□ -2.11
UBP3YER151C SOH1P38633 127 aa1.86□□□□□ -2.11
UBP3YER151C SKP1P52286 194 aa1.86□□□□□ -2.11
UBP3YER151C NSI1Q12457 570 aa1.86□□□□□ -2.11
UBP3YER151C NCL1P38205 684 aaKnown RBP1.86□□□□□ -2.11
UBP3YER151C CBC2Q08920 208 aaKnown RBP RIP-Chip data1.86□□□□□ -2.11not detected
UBP3YER151C YLR122CQ12312 125 aa1.86□□□□□ -2.11
UBP3YER151C RPS9AO13516 197 aaKnown RBP1.85□□□□□ -2.11
UBP3YER151C RNQ1P25367 405 aa1.85□□□□□ -2.11
UBP3YER151C YPP1P46951 817 aa1.85□□□□□ -2.11
UBP3YER151C GIS1Q03833 894 aa1.85□□□□□ -2.11
UBP3YER151C YML133CQ03099 1374 aa1.85□□□□□ -2.11
UBP3YER151C SFA1P32771 386 aa1.85□□□□□ -2.11
UBP3YER151C RPN1P38764 993 aaKnown RBP1.85□□□□□ -2.11
UBP3YER151C RIM21P48565 533 aa1.85□□□□□ -2.11
UBP3YER151C SRB8P25648 1427 aa1.85□□□□□ -2.11
UBP3YER151C PDR11P40550 1411 aa1.84□□□□□ -2.11
UBP3YER151C NAR1P23503 491 aaKnown RBP1.84□□□□□ -2.12
UBP3YER151C BIO2P32451 375 aa1.84□□□□□ -2.12
UBP3YER151C SAF1P38352 637 aa1.84□□□□□ -2.12
UBP3YER151C PRK1P40494 810 aa1.84□□□□□ -2.12
UBP3YER151C SKI3P17883 1432 aaKnown RBP1.84□□□□□ -2.12
UBP3YER151C RSF2P46974 1380 aa1.84□□□□□ -2.12
UBP3YER151C ENO2P00925 437 aaKnown RBP1.83□□□□□ -2.12
UBP3YER151C YBL036CP38197 257 aa1.83□□□□□ -2.12
UBP3YER151C MET10P39692 1035 aa1.83□□□□□ -2.12
UBP3YER151C AIM9P40053 627 aaKnown RBP1.83□□□□□ -2.12
UBP3YER151C MTO1P53070 669 aa1.83□□□□□ -2.12
UBP3YER151C PRP43P53131 767 aaKnown RBP1.83□□□□□ -2.12
UBP3YER151C GIS4Q04233 774 aa1.83□□□□□ -2.12
UBP3YER151C RPS6AP0CX37 236 aaKnown RBP1.83□□□□□ -2.12
UBP3YER151C RPS6BP0CX38 236 aaPredicted RBP1.83□□□□□ -2.12
UBP3YER151C MLF3P32047 452 aa1.83□□□□□ -2.12
UBP3YER151C POL12P38121 705 aaPredicted RBP1.83□□□□□ -2.12
UBP3YER151C MRX10Q05648 414 aa1.83□□□□□ -2.12
UBP3YER151C UTP4Q06679 776 aaKnown RBP1.83□□□□□ -2.12
UBP3YER151C YFR016CP43597 1233 aaKnown RBP1.82□□□□□ -2.12
UBP3YER151C LYS2P07702 1392 aa1.82□□□□□ -2.12
UBP3YER151C RPC31P17890 251 aa1.82□□□□□ -2.12
UBP3YER151C SPO74P45819 413 aa1.82□□□□□ -2.12
UBP3YER151C YEF3P16521 1044 aaKnown RBP1.82□□□□□ -2.12
UBP3YER151C PEP12P32854 288 aa1.82□□□□□ -2.12
UBP3YER151C CTH1P47976 325 aa1.82□□□□□ -2.12
UBP3YER151C DMA2P53924 522 aa1.82□□□□□ -2.12
UBP3YER151C Q0182Q9ZZW1 134 aa1.82□□□□□ -2.12
UBP3YER151C YRF1-4O13559 1382 aa1.81□□□□□ -2.12
UBP3YER151C ROM2P51862 1356 aaKnown RBP1.81□□□□□ -2.12
UBP3YER151C NTH2P35172 780 aa1.81□□□□□ -2.12
UBP3YER151C HXT5P38695 592 aa1.81□□□□□ -2.12
UBP3YER151C YFL034WP43564 1073 aa1.81□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 49.7 ms