RNA–Protein interactions for RNA: YDR460W

TFB3, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeastyeast

Gene TFB3, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB3YDR460W EDE1P34216 1381 aa5.44□□□□□ -1.54
TFB3YDR460W CYT1P07143 309 aa5.44□□□□□ -1.54
TFB3YDR460W UBP1P25037 809 aa5.44□□□□□ -1.54
TFB3YDR460W YML020WQ03722 664 aa5.44□□□□□ -1.54
TFB3YDR460W TRS33Q99394 268 aa5.44□□□□□ -1.54
TFB3YDR460W TPS3P38426 1054 aaKnown RBP5.43□□□□□ -1.54
TFB3YDR460W DLD3P39976 496 aaKnown RBP5.43□□□□□ -1.54
TFB3YDR460W PUN1Q06991 263 aa5.43□□□□□ -1.54
TFB3YDR460W GEA1P47102 1408 aaPredicted RBP5.42□□□□□ -1.54
TFB3YDR460W RPP0P05317 312 aaKnown RBP5.42□□□□□ -1.54
TFB3YDR460W SRS2P12954 1174 aa5.42□□□□□ -1.54
TFB3YDR460W LTV1P34078 463 aa5.42□□□□□ -1.54
TFB3YDR460W VPS24P36095 224 aaKnown RBP5.42□□□□□ -1.54
TFB3YDR460W NNF2P53253 936 aa5.42□□□□□ -1.54
TFB3YDR460W YNL011CP53980 444 aa5.42□□□□□ -1.54
TFB3YDR460W BCK1Q01389 1478 aa5.42□□□□□ -1.54
TFB3YDR460W ARG82P07250 355 aa5.41□□□□□ -1.54
TFB3YDR460W NGR1P32831 672 aaKnown RBP5.41□□□□□ -1.54
TFB3YDR460W UTP7P40055 554 aaKnown RBP5.41□□□□□ -1.54
TFB3YDR460W AAD14P42884 376 aa5.41□□□□□ -1.54
TFB3YDR460W CWH41P53008 833 aa5.41□□□□□ -1.54
TFB3YDR460W ESC2Q06340 456 aa5.41□□□□□ -1.54
TFB3YDR460W PSH1Q12161 406 aa5.41□□□□□ -1.54
TFB3YDR460W HAT1Q12341 374 aa5.41□□□□□ -1.54
TFB3YDR460W SRP54P20424 541 aaKnown RBP5.4□□□□□ -1.54
TFB3YDR460W RKM3P38222 552 aa5.4□□□□□ -1.54
TFB3YDR460W NAB3P38996 802 aaKnown RBP RIP-Chip data5.4□□□□□ -1.54not detected
TFB3YDR460W BRE2P43132 505 aa5.4□□□□□ -1.54
TFB3YDR460W SUM1P46676 1062 aa5.4□□□□□ -1.54
TFB3YDR460W PTK2P47116 818 aaKnown RBP5.4□□□□□ -1.54
TFB3YDR460W YJR115WP47152 169 aa5.4□□□□□ -1.54
TFB3YDR460W VPS4P52917 437 aa5.4□□□□□ -1.54
TFB3YDR460W PNP1Q05788 311 aa5.4□□□□□ -1.54
TFB3YDR460W NOP8Q08287 484 aaPredicted RBP5.4□□□□□ -1.54
TFB3YDR460W MHP1P43638 1398 aa5.4□□□□□ -1.55
TFB3YDR460W SUV3P32580 737 aa5.39□□□□□ -1.55
TFB3YDR460W SWI3P32591 825 aa5.39□□□□□ -1.55
TFB3YDR460W BYE1P36106 594 aa5.39□□□□□ -1.55
TFB3YDR460W ALD4P46367 519 aaKnown RBP5.39□□□□□ -1.55
TFB3YDR460W RNT1Q02555 471 aa5.39□□□□□ -1.55
TFB3YDR460W YPL062WQ02781 134 aa5.39□□□□□ -1.55
TFB3YDR460W PRP3Q03338 469 aaPredicted RBP5.39□□□□□ -1.55
TFB3YDR460W KAR5Q04746 504 aa5.39□□□□□ -1.55
TFB3YDR460W YPQ2Q06328 317 aa5.39□□□□□ -1.55
TFB3YDR460W SRF1Q12516 437 aa5.39□□□□□ -1.55
TFB3YDR460W PDR11P40550 1411 aa5.39□□□□□ -1.55
TFB3YDR460W SSF1P38789 453 aaPredicted RBP5.38□□□□□ -1.55
TFB3YDR460W YMR124WP39523 943 aaKnown RBP5.38□□□□□ -1.55
TFB3YDR460W TPM2P40414 161 aa5.38□□□□□ -1.55
TFB3YDR460W LSP1Q12230 341 aaKnown RBP5.38□□□□□ -1.55
TFB3YDR460W MCM1P11746 286 aa5.37□□□□□ -1.55
TFB3YDR460W NOP14Q99207 810 aaKnown RBP5.37□□□□□ -1.55
TFB3YDR460W RAD9P14737 1309 aa5.37□□□□□ -1.55
TFB3YDR460W TOP1P04786 769 aa5.36□□□□□ -1.55
TFB3YDR460W FUR4P05316 633 aaKnown RBP5.36□□□□□ -1.55
TFB3YDR460W BOL3P39724 118 aa5.36□□□□□ -1.55
TFB3YDR460W DSN1P40568 576 aa5.36□□□□□ -1.55
TFB3YDR460W CTR9P89105 1077 aa5.36□□□□□ -1.55
TFB3YDR460W YSH1Q06224 779 aaPredicted RBP5.36□□□□□ -1.55
TFB3YDR460W CDC45Q08032 650 aa5.36□□□□□ -1.55
TFB3YDR460W YVC1Q12324 675 aa5.36□□□□□ -1.55
TFB3YDR460W ENT1Q12518 454 aa5.36□□□□□ -1.55
TFB3YDR460W YBL113CQ7M4S9 792 aa5.36□□□□□ -1.55
TFB3YDR460W RRN6P32786 894 aa5.35□□□□□ -1.55
TFB3YDR460W DLD1P32891 587 aa5.35□□□□□ -1.55
TFB3YDR460W SLD2P34252 453 aa5.35□□□□□ -1.55
TFB3YDR460W SSN3P39073 555 aa5.35□□□□□ -1.55
TFB3YDR460W SLN1P39928 1220 aaPredicted RBP5.35□□□□□ -1.55
TFB3YDR460W ALA1P40825 983 aaKnown RBP5.35□□□□□ -1.55
TFB3YDR460W NUP85P46673 744 aa5.35□□□□□ -1.55
TFB3YDR460W VPS60Q03390 229 aa5.35□□□□□ -1.55
TFB3YDR460W YBR197CP38306 217 aa5.34□□□□□ -1.55
TFB3YDR460W ERP5P38819 212 aa5.34□□□□□ -1.55
TFB3YDR460W MSN5P52918 1224 aa5.34□□□□□ -1.55
TFB3YDR460W LSC2P53312 427 aa5.34□□□□□ -1.55
TFB3YDR460W IOC4Q04213 475 aa5.34□□□□□ -1.55
TFB3YDR460W COG8Q04632 607 aa5.34□□□□□ -1.55
TFB3YDR460W PDR5P33302 1511 aaKnown RBP5.33□□□□□ -1.56
TFB3YDR460W SSM4P40318 1319 aa5.33□□□□□ -1.56
TFB3YDR460W TRL1P09880 827 aaKnown RBP5.33□□□□□ -1.56
TFB3YDR460W GAR1P28007 205 aaKnown RBP5.33□□□□□ -1.56
TFB3YDR460W MSP1P28737 362 aa5.33□□□□□ -1.56
TFB3YDR460W ARL1P38116 183 aaKnown RBP5.33□□□□□ -1.56
TFB3YDR460W HXT5P38695 592 aa5.33□□□□□ -1.56
TFB3YDR460W VPS27P40343 622 aaKnown RBP5.33□□□□□ -1.56
TFB3YDR460W YJR098CP47139 656 aa5.33□□□□□ -1.56
TFB3YDR460W ATG1P53104 897 aa5.33□□□□□ -1.56
TFB3YDR460W GCR2Q01722 534 aa5.33□□□□□ -1.56
TFB3YDR460W FOX2Q02207 900 aaKnown RBP5.33□□□□□ -1.56
TFB3YDR460W CAB1Q04430 367 aa5.33□□□□□ -1.56
TFB3YDR460W LSO1Q3E827 93 aa5.33□□□□□ -1.56
TFB3YDR460W CFT1Q06632 1357 aaKnown RBP5.32□□□□□ -1.56
TFB3YDR460W HSC82P15108 705 aaKnown RBP5.32□□□□□ -1.56
TFB3YDR460W ZUO1P32527 433 aaKnown RBP5.32□□□□□ -1.56
TFB3YDR460W ISC10P32645 267 aa5.32□□□□□ -1.56
TFB3YDR460W SCD5P34758 872 aa5.32□□□□□ -1.56
TFB3YDR460W RAD26P40352 1085 aa5.32□□□□□ -1.56
TFB3YDR460W VPS30Q02948 557 aa5.32□□□□□ -1.56
TFB3YDR460W KAR3P17119 729 aa5.31□□□□□ -1.56
TFB3YDR460W DAL1P32375 460 aa5.31□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 48.5 ms