RNA–Protein interactions for RNA: YDR392W

SPT3, Transcript of Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, yeastyeast

Gene SPT3, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT3YDR392W YLR419WQ06698 1435 aaKnown RBP7.39□□□□□ -1.23
SPT3YDR392W TEC1P18412 486 aa7.39□□□□□ -1.23
SPT3YDR392W TRK2P28584 889 aa7.39□□□□□ -1.23
SPT3YDR392W MKS1P34072 584 aa7.39□□□□□ -1.23
SPT3YDR392W APE3P37302 537 aaKnown RBP7.39□□□□□ -1.23
SPT3YDR392W FET4P40988 552 aa7.39□□□□□ -1.23
SPT3YDR392W YJR098CP47139 656 aa7.39□□□□□ -1.23
SPT3YDR392W YGR035CP53222 116 aa7.39□□□□□ -1.23
SPT3YDR392W CSR2Q12734 1121 aa7.39□□□□□ -1.23
SPT3YDR392W ADE6P38972 1358 aaKnown RBP7.38□□□□□ -1.23
SPT3YDR392W ICL1P28240 557 aaPredicted RBP7.38□□□□□ -1.23
SPT3YDR392W YHR131CP38835 850 aa7.37□□□□□ -1.23
SPT3YDR392W KIN1P13185 1064 aa7.36□□□□□ -1.23
SPT3YDR392W TIM50Q02776 476 aa7.36□□□□□ -1.23
SPT3YDR392W BDS1Q08347 646 aa7.36□□□□□ -1.23
SPT3YDR392W YDR034W-BQ6Q5X2 51 aa7.36□□□□□ -1.23
SPT3YDR392W SMY1P32364 656 aaKnown RBP7.35□□□□□ -1.23
SPT3YDR392W PFF1P38244 976 aa7.35□□□□□ -1.23
SPT3YDR392W OSH7P38755 437 aa7.35□□□□□ -1.23
SPT3YDR392W XKS1P42826 600 aa7.35□□□□□ -1.23
SPT3YDR392W DFG5Q05031 458 aa7.35□□□□□ -1.23
SPT3YDR392W HPF1Q05164 967 aa7.35□□□□□ -1.23
SPT3YDR392W GSC2P40989 1895 aa7.34□□□□□ -1.23
SPT3YDR392W MAK16P10962 306 aaPredicted RBP7.34□□□□□ -1.23
SPT3YDR392W GUT2P32191 649 aa7.34□□□□□ -1.23
SPT3YDR392W WHI3P34761 661 aaKnown RBP7.34□□□□□ -1.23
SPT3YDR392W ALD4P46367 519 aaKnown RBP7.34□□□□□ -1.23
SPT3YDR392W FBP26P32604 452 aa7.33□□□□□ -1.24
SPT3YDR392W YPR084WQ06821 456 aa7.33□□□□□ -1.24
SPT3YDR392W NAF1P53919 492 aaKnown RBP7.32□□□□□ -1.24
SPT3YDR392W AHC1Q12433 566 aa7.32□□□□□ -1.24
SPT3YDR392W YLL067CQ07888 1374 aa7.32□□□□□ -1.24
SPT3YDR392W STE6P12866 1290 aa7.31□□□□□ -1.24
SPT3YDR392W MSM1P22438 575 aa7.31□□□□□ -1.24
SPT3YDR392W YKU70P32807 602 aa7.31□□□□□ -1.24
SPT3YDR392W FIR1P40020 876 aa7.31□□□□□ -1.24
SPT3YDR392W MEC3Q02574 474 aa7.31□□□□□ -1.24
SPT3YDR392W MTC5Q03897 1148 aa7.31□□□□□ -1.24
SPT3YDR392W EMP47P43555 445 aa7.3□□□□□ -1.24
SPT3YDR392W ROG3P43602 733 aa7.3□□□□□ -1.24
SPT3YDR392W TY1A-MR1Q04215 440 aa7.3□□□□□ -1.24
SPT3YDR392W CSE4P36012 229 aa7.29□□□□□ -1.24
SPT3YDR392W RPN1P38764 993 aaKnown RBP7.29□□□□□ -1.24
SPT3YDR392W STE20Q03497 939 aaKnown RBP7.29□□□□□ -1.24
SPT3YDR392W SGD1Q06132 899 aa7.29□□□□□ -1.24
SPT3YDR392W RPP2BP02400 110 aaKnown RBP7.28□□□□□ -1.24
SPT3YDR392W RRT6P53117 311 aaPredicted RBP7.28□□□□□ -1.24
SPT3YDR392W ULP1Q02724 621 aa7.28□□□□□ -1.24
SPT3YDR392W ISU1Q03020 165 aa7.27□□□□□ -1.25
SPT3YDR392W YPR204WQ08995 1032 aa7.27□□□□□ -1.25
SPT3YDR392W DPH6Q12429 685 aa7.27□□□□□ -1.25
SPT3YDR392W RCM1P53972 490 aa7.26□□□□□ -1.25
SPT3YDR392W RBA50Q04418 439 aa7.26□□□□□ -1.25
SPT3YDR392W FRA1Q07825 749 aa7.26□□□□□ -1.25
SPT3YDR392W VTC4P47075 721 aa7.25□□□□□ -1.25
SPT3YDR392W LYS5P50113 272 aa7.25□□□□□ -1.25
SPT3YDR392W KTR4P38131 464 aa7.24□□□□□ -1.25
SPT3YDR392W LDH1P38139 375 aa7.24□□□□□ -1.25
SPT3YDR392W GUA1P38625 525 aaKnown RBP7.24□□□□□ -1.25
SPT3YDR392W ERO1Q03103 563 aa7.24□□□□□ -1.25
SPT3YDR392W CCP1P00431 361 aa7.22□□□□□ -1.25
SPT3YDR392W NAP1P25293 417 aaKnown RBP7.22□□□□□ -1.25
SPT3YDR392W GRX1P25373 110 aaKnown RBP7.22□□□□□ -1.25
SPT3YDR392W DAL1P32375 460 aa7.22□□□□□ -1.25
SPT3YDR392W DLD3P39976 496 aaKnown RBP7.22□□□□□ -1.25
SPT3YDR392W YFL040WP43562 540 aa7.22□□□□□ -1.25
SPT3YDR392W YLR225CQ05948 407 aaKnown RBP7.22□□□□□ -1.25
SPT3YDR392W STB3Q12427 513 aa7.22□□□□□ -1.25
SPT3YDR392W SEN1Q00416 2231 aaKnown RBP7.21□□□□□ -1.25
SPT3YDR392W RPO41P13433 1351 aaKnown RBP7.21□□□□□ -1.25
SPT3YDR392W CDC19P00549 500 aaKnown RBP7.21□□□□□ -1.26
SPT3YDR392W SPT5P27692 1063 aaKnown RBP7.21□□□□□ -1.26
SPT3YDR392W ADE16P54113 591 aaKnown RBP7.21□□□□□ -1.26
SPT3YDR392W GRX6Q12438 231 aa7.21□□□□□ -1.26
SPT3YDR392W AFG2P32794 780 aa7.2□□□□□ -1.26
SPT3YDR392W ICP55P40051 511 aa7.2□□□□□ -1.26
SPT3YDR392W VPS62P53285 467 aa7.2□□□□□ -1.26
SPT3YDR392W ECM30Q06673 1274 aa7.2□□□□□ -1.26
SPT3YDR392W PSF2P40359 213 aa7.19□□□□□ -1.26
SPT3YDR392W CTI6Q08923 506 aa7.19□□□□□ -1.26
SPT3YDR392W FMP27Q06179 2628 aa7.18□□□□□ -1.26
SPT3YDR392W MSC7P38694 644 aa7.18□□□□□ -1.26
SPT3YDR392W YGR117CP53270 476 aa7.18□□□□□ -1.26
SPT3YDR392W NAM8Q00539 523 aaKnown RBP7.18□□□□□ -1.26
SPT3YDR392W PPH3P32345 308 aa7.17□□□□□ -1.26
SPT3YDR392W YBL036CP38197 257 aa7.17□□□□□ -1.26
SPT3YDR392W PNT1P38969 423 aa7.17□□□□□ -1.26
SPT3YDR392W ZDS2P54786 942 aa7.17□□□□□ -1.26
SPT3YDR392W BRL1P38770 471 aa7.16□□□□□ -1.26
SPT3YDR392W JJJ3P47138 172 aa7.15□□□□□ -1.26
SPT3YDR392W TRM44Q02648 567 aaKnown RBP7.15□□□□□ -1.26
SPT3YDR392W IRC3Q06683 689 aa7.15□□□□□ -1.26
SPT3YDR392W SIR4P11978 1358 aa7.15□□□□□ -1.26
SPT3YDR392W PMD1P32634 1753 aa7.15□□□□□ -1.27
SPT3YDR392W SPT2P06843 333 aaPredicted RBP7.14□□□□□ -1.27
SPT3YDR392W APL6P46682 809 aa7.14□□□□□ -1.27
SPT3YDR392W ISR1Q06098 443 aaKnown RBP7.14□□□□□ -1.27
SPT3YDR392W MAP1Q01662 387 aaKnown RBP RIP-Chip data7.13□□□□□ -1.27not detected
SPT3YDR392W WTM2Q12206 467 aa7.13□□□□□ -1.27
SPT3YDR392W PUS1Q12211 544 aaKnown RBP7.13□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms