RNA–Protein interactions for RNA: YDL070W

BDF2, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF2, Length 1,917 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF2YDL070W VPS4P52917 437 aa7.4□□□□□ -1.22
BDF2YDL070W MLC1P53141 149 aa7.4□□□□□ -1.22
BDF2YDL070W ISW2Q08773 1120 aa7.4□□□□□ -1.22
BDF2YDL070W PDC1P06169 563 aaKnown RBP7.4□□□□□ -1.23
BDF2YDL070W SSA2P10592 639 aaKnown RBP7.4□□□□□ -1.23
BDF2YDL070W STO1P34160 861 aaKnown RBP7.4□□□□□ -1.23
BDF2YDL070W YKT6P36015 200 aaKnown RBP7.4□□□□□ -1.23
BDF2YDL070W MUD2P36084 527 aaKnown RBP7.4□□□□□ -1.23
BDF2YDL070W TMA16Q08687 178 aa7.4□□□□□ -1.23
BDF2YDL070W SEC39Q12745 709 aa7.4□□□□□ -1.23
BDF2YDL070W NUP133P36161 1157 aa7.39□□□□□ -1.23
BDF2YDL070W CIC1P38779 376 aaKnown RBP7.39□□□□□ -1.23
BDF2YDL070W STM1P39015 273 aaKnown RBP7.39□□□□□ -1.23
BDF2YDL070W SEC9P40357 651 aa7.39□□□□□ -1.23
BDF2YDL070W BUD6P41697 788 aa7.39□□□□□ -1.23
BDF2YDL070W PIB2P53191 635 aa7.39□□□□□ -1.23
BDF2YDL070W MAL13P53338 473 aa7.39□□□□□ -1.23
BDF2YDL070W YNL011CP53980 444 aa7.39□□□□□ -1.23
BDF2YDL070W ZDS2P54786 942 aa7.39□□□□□ -1.23
BDF2YDL070W SFH1Q06168 426 aa7.39□□□□□ -1.23
BDF2YDL070W ATG23Q06671 453 aa7.39□□□□□ -1.23
BDF2YDL070W RUD3Q12234 484 aaKnown RBP7.39□□□□□ -1.23
BDF2YDL070W TCB1Q12466 1186 aa7.39□□□□□ -1.23
BDF2YDL070W ECM32P32644 1121 aaKnown RBP7.39□□□□□ -1.23
BDF2YDL070W PRP40P33203 583 aaKnown RBP7.39□□□□□ -1.23
BDF2YDL070W KTR3P38130 404 aaPredicted RBP7.39□□□□□ -1.23
BDF2YDL070W SPT8P38915 602 aa7.39□□□□□ -1.23
BDF2YDL070W LYS4P49367 693 aaPredicted RBP7.39□□□□□ -1.23
BDF2YDL070W LAM6Q08001 693 aa7.39□□□□□ -1.23
BDF2YDL070W ATG9Q12142 997 aa7.39□□□□□ -1.23
BDF2YDL070W YEL043WP32618 956 aa7.38□□□□□ -1.23
BDF2YDL070W RFT1P38206 574 aaPredicted RBP7.38□□□□□ -1.23
BDF2YDL070W RIO2P40160 425 aaKnown RBP7.38□□□□□ -1.23
BDF2YDL070W YKE2P52553 114 aa7.38□□□□□ -1.23
BDF2YDL070W FOX2Q02207 900 aaKnown RBP7.38□□□□□ -1.23
BDF2YDL070W RSF2P46974 1380 aa7.38□□□□□ -1.23
BDF2YDL070W MATALPHA2P0CY08 210 aa7.37□□□□□ -1.23
BDF2YDL070W HMLALPHA2P0CY09 210 aa7.37□□□□□ -1.23
BDF2YDL070W PHO13P19881 312 aa7.37□□□□□ -1.23
BDF2YDL070W SPT5P27692 1063 aaKnown RBP7.37□□□□□ -1.23
BDF2YDL070W MCM4P30665 933 aaKnown RBP7.37□□□□□ -1.23
BDF2YDL070W NPR2P39923 615 aa7.37□□□□□ -1.23
BDF2YDL070W HUL4P40985 892 aa7.37□□□□□ -1.23
BDF2YDL070W ALF1P53904 254 aa7.37□□□□□ -1.23
BDF2YDL070W YDR338CQ05497 695 aa7.37□□□□□ -1.23
BDF2YDL070W VPS38Q05919 439 aa7.37□□□□□ -1.23
BDF2YDL070W YOR223WQ12015 292 aa7.37□□□□□ -1.23
BDF2YDL070W YOL098CQ12496 1037 aa7.37□□□□□ -1.23
BDF2YDL070W RAD3P06839 778 aa7.37□□□□□ -1.23
BDF2YDL070W KCC4P25389 1037 aa7.37□□□□□ -1.23
BDF2YDL070W CBF5P33322 483 aaKnown RBP RIP-Chip data7.37□□□□□ -1.23not detected
BDF2YDL070W SSF1P38789 453 aaPredicted RBP7.37□□□□□ -1.23
BDF2YDL070W MGA2P40578 1113 aa7.37□□□□□ -1.23
BDF2YDL070W CTF4Q01454 927 aa7.37□□□□□ -1.23
BDF2YDL070W FBP26P32604 452 aa7.36□□□□□ -1.23
BDF2YDL070W UBP12P39538 1254 aa7.36□□□□□ -1.23
BDF2YDL070W DNM1P54861 757 aa7.36□□□□□ -1.23
BDF2YDL070W HOT1Q03213 719 aa7.36□□□□□ -1.23
BDF2YDL070W SDH5Q08230 162 aa7.36□□□□□ -1.23
BDF2YDL070W TOP1P04786 769 aa7.35□□□□□ -1.23
BDF2YDL070W YMR1P47147 688 aaKnown RBP RIP-Chip data7.35□□□□□ -1.23not detected
BDF2YDL070W TAN1P53072 289 aaPredicted RBP7.35□□□□□ -1.23
BDF2YDL070W NNF2P53253 936 aa7.35□□□□□ -1.23
BDF2YDL070W YLR407WQ06070 228 aa7.35□□□□□ -1.23
BDF2YDL070W PGI1P12709 554 aaKnown RBP7.35□□□□□ -1.23
BDF2YDL070W CDC60P26637 1090 aaKnown RBP7.35□□□□□ -1.23
BDF2YDL070W ZUO1P32527 433 aaKnown RBP7.35□□□□□ -1.23
BDF2YDL070W CST6P40535 587 aa7.35□□□□□ -1.23
BDF2YDL070W HCR1Q05775 265 aaKnown RBP7.35□□□□□ -1.23
BDF2YDL070W OSH2Q12451 1283 aa7.35□□□□□ -1.23
BDF2YDL070W ARD1P07347 238 aaPredicted RBP7.34□□□□□ -1.23
BDF2YDL070W LPD1P09624 499 aaKnown RBP7.34□□□□□ -1.23
BDF2YDL070W PRP16P15938 1071 aaPredicted RBP7.34□□□□□ -1.23
BDF2YDL070W RGP1P16664 663 aa7.34□□□□□ -1.23
BDF2YDL070W DAL7P21826 554 aa7.34□□□□□ -1.23
BDF2YDL070W MIC19P43594 170 aa7.34□□□□□ -1.23
BDF2YDL070W YJR079WP47126 109 aa7.34□□□□□ -1.23
BDF2YDL070W BOP3P53958 396 aa7.34□□□□□ -1.23
BDF2YDL070W ESF1Q06344 628 aaKnown RBP7.34□□□□□ -1.23
BDF2YDL070W HSP82P02829 709 aaKnown RBP7.33□□□□□ -1.24
BDF2YDL070W RAD1P06777 1100 aa7.33□□□□□ -1.24
BDF2YDL070W SEC14P24280 304 aaKnown RBP7.33□□□□□ -1.24
BDF2YDL070W SLA1P32790 1244 aa7.33□□□□□ -1.24
BDF2YDL070W HEL1P36113 551 aa7.33□□□□□ -1.24
BDF2YDL070W PXL1P36166 706 aa7.33□□□□□ -1.24
BDF2YDL070W CCC2P38995 1004 aa7.33□□□□□ -1.24
BDF2YDL070W MDM38Q08179 573 aa7.33□□□□□ -1.24
BDF2YDL070W SLM3Q12093 417 aa7.33□□□□□ -1.24
BDF2YDL070W DIP2Q12220 943 aaPredicted RBP7.33□□□□□ -1.24
BDF2YDL070W HXK1P04806 485 aaKnown RBP7.33□□□□□ -1.24
BDF2YDL070W PRE10P21242 288 aaKnown RBP RIP-Chip data7.33□□□□□ -1.24not detected
BDF2YDL070W RAD51P25454 400 aa7.33□□□□□ -1.24
BDF2YDL070W SEC65P29478 273 aa7.33□□□□□ -1.24
BDF2YDL070W ADE17P38009 592 aaKnown RBP7.33□□□□□ -1.24
BDF2YDL070W BUD16P39988 312 aa7.33□□□□□ -1.24
BDF2YDL070W EPL1P43572 832 aa7.33□□□□□ -1.24
BDF2YDL070W IMP2'P32351 346 aa7.32□□□□□ -1.24
BDF2YDL070W YKL133CP36066 463 aa7.32□□□□□ -1.24
BDF2YDL070W SMF1P38925 575 aa7.32□□□□□ -1.24
BDF2YDL070W VPS30Q02948 557 aa7.32□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 41.2 ms