RNA–Protein interactions for RNA: YBL022C

PIM1, Transcript of ATP-dependent Lon protease, yeast

Gene PIM1, Length 3,402 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PIM1	YBL022C	RDS1	P25611	832 aa		4.59	□□□□□ -1.67
PIM1	YBL022C	BUD16	P39988	312 aa		4.59	□□□□□ -1.67
PIM1	YBL022C	PTP3	P40048	928 aa		4.59	□□□□□ -1.67
PIM1	YBL022C	AXL1	P40851	1208 aa		4.59	□□□□□ -1.67
PIM1	YBL022C	RTF1	P53064	558 aa		4.59	□□□□□ -1.67
PIM1	YBL022C	CPA2	P03965	1118 aa	Known RBP	4.59	□□□□□ -1.67
PIM1	YBL022C	ADE3	P07245	946 aa	Known RBP	4.59	□□□□□ -1.67
PIM1	YBL022C	MCM1	P11746	286 aa		4.59	□□□□□ -1.67
PIM1	YBL022C	RPO26	P20435	155 aa		4.59	□□□□□ -1.67
PIM1	YBL022C	BEM4	P39011	633 aa		4.59	□□□□□ -1.67
PIM1	YBL022C	DSD1	P53095	428 aa		4.59	□□□□□ -1.67
PIM1	YBL022C	RRB1	Q04225	511 aa	Known RBP	4.59	□□□□□ -1.67
PIM1	YBL022C	GGA1	Q06336	557 aa		4.59	□□□□□ -1.67
PIM1	YBL022C	NOP6	Q07623	225 aa	Known RBP	4.59	□□□□□ -1.67
PIM1	YBL022C	PYC1	P11154	1178 aa	Known RBP	4.59	□□□□□ -1.68
PIM1	YBL022C	PPX1	P38698	397 aa		4.59	□□□□□ -1.68
PIM1	YBL022C	ARI1	P53111	347 aa	Known RBP	4.59	□□□□□ -1.68
PIM1	YBL022C	CAF130	P53280	1122 aa	Predicted RBP	4.59	□□□□□ -1.68
PIM1	YBL022C	YLL054C	Q12244	843 aa		4.59	□□□□□ -1.68
PIM1	YBL022C	CCT4	P39078	528 aa	Known RBP	4.58	□□□□□ -1.68
PIM1	YBL022C	MIC19	P43594	170 aa		4.58	□□□□□ -1.68
PIM1	YBL022C	PDI1	P17967	522 aa	Known RBP	4.58	□□□□□ -1.68
PIM1	YBL022C	MAK11	P20484	414 aa	Known RBP	4.58	□□□□□ -1.68
PIM1	YBL022C	SCJ1	P25303	377 aa		4.58	□□□□□ -1.68
PIM1	YBL022C	VPS53	P47061	822 aa		4.58	□□□□□ -1.68
PIM1	YBL022C	SLK19	Q08581	821 aa	Known RBP	4.58	□□□□□ -1.68
PIM1	YBL022C	CSE1	P33307	960 aa		4.58	□□□□□ -1.68
PIM1	YBL022C	MFT1	P33441	392 aa	Known RBP	4.58	□□□□□ -1.68
PIM1	YBL022C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
PIM1	YBL022C	MDJ2	P42834	146 aa		4.58	□□□□□ -1.68
PIM1	YBL022C	ESBP6	P53918	673 aa		4.58	□□□□□ -1.68
PIM1	YBL022C	TAF8	Q03750	510 aa		4.58	□□□□□ -1.68
PIM1	YBL022C	YLR407W	Q06070	228 aa		4.58	□□□□□ -1.68
PIM1	YBL022C	NHA1	Q99271	985 aa		4.58	□□□□□ -1.68
PIM1	YBL022C	YEL043W	P32618	956 aa		4.57	□□□□□ -1.68
PIM1	YBL022C	YER130C	P39959	443 aa		4.57	□□□□□ -1.68
PIM1	YBL022C	SPO1	P53541	631 aa		4.57	□□□□□ -1.68
PIM1	YBL022C	BNI1	P41832	1953 aa		4.57	□□□□□ -1.68
PIM1	YBL022C	NPL4	P33755	580 aa		4.57	□□□□□ -1.68
PIM1	YBL022C	FAR8	Q05040	523 aa		4.57	□□□□□ -1.68
PIM1	YBL022C	RGA2	Q06407	1009 aa		4.57	□□□□□ -1.68
PIM1	YBL022C	ARD1	P07347	238 aa	Predicted RBP	4.56	□□□□□ -1.68
PIM1	YBL022C	PHO87	P25360	923 aa		4.56	□□□□□ -1.68
PIM1	YBL022C	MAL33	P38157	468 aa		4.56	□□□□□ -1.68
PIM1	YBL022C	REV7	P38927	245 aa		4.56	□□□□□ -1.68
PIM1	YBL022C	SEC9	P40357	651 aa		4.56	□□□□□ -1.68
PIM1	YBL022C	TEL2	P53038	688 aa		4.56	□□□□□ -1.68
PIM1	YBL022C	PCL10	P53124	433 aa		4.56	□□□□□ -1.68
PIM1	YBL022C	PDR18	P53756	1333 aa		4.56	□□□□□ -1.68
PIM1	YBL022C	PET123	P17558	318 aa		4.56	□□□□□ -1.68
PIM1	YBL022C	MCM4	P30665	933 aa	Known RBP	4.56	□□□□□ -1.68
PIM1	YBL022C	SHM1	P37292	490 aa	Predicted RBP	4.56	□□□□□ -1.68
PIM1	YBL022C	KTR3	P38130	404 aa	Predicted RBP	4.56	□□□□□ -1.68
PIM1	YBL022C	AMN1	P38285	549 aa	Predicted RBP	4.56	□□□□□ -1.68
PIM1	YBL022C	PIH1	P38768	344 aa		4.56	□□□□□ -1.68
PIM1	YBL022C	EFM4	P40516	257 aa		4.56	□□□□□ -1.68
PIM1	YBL022C	YGL081W	P53156	320 aa		4.56	□□□□□ -1.68
PIM1	YBL022C	GIN4	Q12263	1142 aa		4.56	□□□□□ -1.68
PIM1	YBL022C	KAR9	P32526	644 aa		4.56	□□□□□ -1.68
PIM1	YBL022C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
PIM1	YBL022C	AIM20	P40451	204 aa		4.56	□□□□□ -1.68
PIM1	YBL022C	RSA3	Q05942	220 aa	Known RBP	4.56	□□□□□ -1.68
PIM1	YBL022C	LEU2	P04173	364 aa	Predicted RBP	4.55	□□□□□ -1.68
PIM1	YBL022C	NIP1	P32497	812 aa	Known RBP	4.55	□□□□□ -1.68
PIM1	YBL022C	TOA1	P32773	286 aa		4.55	□□□□□ -1.68
PIM1	YBL022C	YKR018C	P36114	725 aa		4.55	□□□□□ -1.68
PIM1	YBL022C	ISW1	P38144	1129 aa		4.55	□□□□□ -1.68
PIM1	YBL022C	RIB2	Q12362	591 aa	Known RBP	4.55	□□□□□ -1.68
PIM1	YBL022C	RPL19A	P0CX82	189 aa	Known RBP	4.55	□□□□□ -1.68
PIM1	YBL022C	RPL19B	P0CX83	189 aa	Predicted RBP	4.55	□□□□□ -1.68
PIM1	YBL022C	SEC23	P15303	768 aa	Known RBP	4.55	□□□□□ -1.68
PIM1	YBL022C	TUP1	P16649	713 aa		4.55	□□□□□ -1.68
PIM1	YBL022C	CTF18	P49956	741 aa		4.55	□□□□□ -1.68
PIM1	YBL022C	SDH5	Q08230	162 aa		4.55	□□□□□ -1.68
PIM1	YBL022C	MET7	Q08645	548 aa		4.55	□□□□□ -1.68
PIM1	YBL022C	OSW1	Q08692	278 aa		4.55	□□□□□ -1.68
PIM1	YBL022C	ADE2	P21264	571 aa	Known RBP	4.55	□□□□□ -1.68
PIM1	YBL022C	ARG1	P22768	420 aa		4.55	□□□□□ -1.68
PIM1	YBL022C	SCT1	P32784	759 aa		4.55	□□□□□ -1.68
PIM1	YBL022C	YNG2	P38806	282 aa	Known RBP	4.55	□□□□□ -1.68
PIM1	YBL022C	RIM20	Q12033	661 aa		4.55	□□□□□ -1.68
PIM1	YBL022C	LSO1	Q3E827	93 aa		4.55	□□□□□ -1.68
PIM1	YBL022C	LAM4	P38800	1345 aa		4.54	□□□□□ -1.68
PIM1	YBL022C	ATO2	P32907	282 aa		4.54	□□□□□ -1.68
PIM1	YBL022C	VPS75	P53853	264 aa		4.54	□□□□□ -1.68
PIM1	YBL022C	TFB2	Q02939	513 aa		4.54	□□□□□ -1.68
PIM1	YBL022C	NGL3	Q03210	505 aa		4.54	□□□□□ -1.68
PIM1	YBL022C	OMS1	Q06668	471 aa		4.54	□□□□□ -1.68
PIM1	YBL022C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
PIM1	YBL022C	ISW2	Q08773	1120 aa		4.54	□□□□□ -1.68
PIM1	YBL022C	SWI1	P09547	1314 aa		4.54	□□□□□ -1.68
PIM1	YBL022C	TOP1	P04786	769 aa		4.54	□□□□□ -1.68
PIM1	YBL022C	PET122	P10355	254 aa		4.54	□□□□□ -1.68
PIM1	YBL022C	CDC48	P25694	835 aa	Known RBP	4.54	□□□□□ -1.68
PIM1	YBL022C	PPH3	P32345	308 aa		4.54	□□□□□ -1.68
PIM1	YBL022C	RAD24	P32641	659 aa		4.54	□□□□□ -1.68
PIM1	YBL022C	GCG1	P32656	232 aa	Known RBP	4.54	□□□□□ -1.68
PIM1	YBL022C	SEC26	P41810	973 aa	Known RBP	4.54	□□□□□ -1.68
PIM1	YBL022C	TAF9	Q05027	157 aa		4.54	□□□□□ -1.68
PIM1	YBL022C	ATG23	Q06671	453 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 64.2 ms