RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 Atxn3Q9CVD2 355 aa12.28□□□□□ -0.44
Sh3rf1-202ENSMUST00000209611 PalmQ9Z0P4 383 aa12.28□□□□□ -0.44
Sh3rf1-202ENSMUST00000209611 P2rx7Q9Z1M0 595 aa12.28□□□□□ -0.44
Sh3rf1-202ENSMUST00000209611 Fchsd2Q3USJ8 740 aa12.28□□□□□ -0.44
Sh3rf1-202ENSMUST00000209611 Plin1Q8CGN5 517 aa12.28□□□□□ -0.44
Sh3rf1-202ENSMUST00000209611 Med14A2ABV5 1459 aaKnown RBP12.28□□□□□ -0.44
Sh3rf1-202ENSMUST00000209611 Ppp1r15aP17564 657 aa12.27□□□□□ -0.44
Sh3rf1-202ENSMUST00000209611 RictorQ6QI06 1708 aa12.27□□□□□ -0.45
Sh3rf1-202ENSMUST00000209611 Swt1Q9DBQ9 907 aa12.27□□□□□ -0.45
Sh3rf1-202ENSMUST00000209611 Dip2aQ8BWT5 1523 aa12.26□□□□□ -0.45
Sh3rf1-202ENSMUST00000209611 Gm6268A2A3U9 297 aa12.26□□□□□ -0.45
Sh3rf1-202ENSMUST00000209611 Ift172Q6VH22 1749 aa12.26□□□□□ -0.45
Sh3rf1-202ENSMUST00000209611 Gtf3c5Q8R2T8 520 aa12.26□□□□□ -0.45
Sh3rf1-202ENSMUST00000209611 Itsn1Q9Z0R4 1714 aa12.26□□□□□ -0.45
Sh3rf1-202ENSMUST00000209611 Cabp4Q8VHC5 271 aa12.25□□□□□ -0.45
Sh3rf1-202ENSMUST00000209611 Trim58Q5NCC9 485 aa12.25□□□□□ -0.45
Sh3rf1-202ENSMUST00000209611 Zc3h13E9Q784 1729 aaKnown RBP12.25□□□□□ -0.45
Sh3rf1-202ENSMUST00000209611 Nrxn1Q9CS84 1514 aa12.25□□□□□ -0.45
Sh3rf1-202ENSMUST00000209611 Gm10563F6WIE4 79 aa12.24□□□□□ -0.45
Sh3rf1-202ENSMUST00000209611 Stk31Q99MW1 1018 aa12.24□□□□□ -0.45
Sh3rf1-202ENSMUST00000209611 Adgrl1Q80TR1 1466 aa12.24□□□□□ -0.45
Sh3rf1-202ENSMUST00000209611 Pik3r4Q8VD65 1358 aa12.24□□□□□ -0.45
Sh3rf1-202ENSMUST00000209611 Gm21190A0A0G2JGJ6 266 aa12.23□□□□□ -0.45
Sh3rf1-202ENSMUST00000209611 B4galnt3Q6L8S8 986 aa12.23□□□□□ -0.45
Sh3rf1-202ENSMUST00000209611 Ttc41Q692V3 1318 aa12.23□□□□□ -0.45
Sh3rf1-202ENSMUST00000209611 Hoxb7P09024 217 aa12.23□□□□□ -0.45
Sh3rf1-202ENSMUST00000209611 Pank1Q8K4K6 548 aa12.23□□□□□ -0.45
Sh3rf1-202ENSMUST00000209611 Dbr1Q923B1 550 aa12.23□□□□□ -0.45
Sh3rf1-202ENSMUST00000209611 Rbm25B2RY56 838 aaKnown RBP12.22□□□□□ -0.45
Sh3rf1-202ENSMUST00000209611 Gemin5Q8BX17 1502 aaKnown RBP12.22□□□□□ -0.45
Sh3rf1-202ENSMUST00000209611 Sirt1Q923E4 737 aa12.22□□□□□ -0.45
Sh3rf1-202ENSMUST00000209611 Ccdc60Q8C4J0 545 aa12.22□□□□□ -0.45
Sh3rf1-202ENSMUST00000209611 Chmp5Q9D7S9 219 aa12.22□□□□□ -0.45
Sh3rf1-202ENSMUST00000209611 IghaA0A0A6YXW6 389 aa12.21□□□□□ -0.45
Sh3rf1-202ENSMUST00000209611 Pcdh10E9PXQ7 1057 aa12.21□□□□□ -0.45
Sh3rf1-202ENSMUST00000209611 Irx3P81067 507 aa12.21□□□□□ -0.45
Sh3rf1-202ENSMUST00000209611 PplQ9R269 1755 aa12.21□□□□□ -0.45
Sh3rf1-202ENSMUST00000209611 Gas2l2Q5SSG4 860 aa12.21□□□□□ -0.46
Sh3rf1-202ENSMUST00000209611 Trim28Q62318 834 aa12.21□□□□□ -0.46
Sh3rf1-202ENSMUST00000209611 U2surpQ6NV83 1029 aaKnown RBP12.21□□□□□ -0.46
Sh3rf1-202ENSMUST00000209611 Dennd6aQ8BH65 605 aa12.21□□□□□ -0.46
Sh3rf1-202ENSMUST00000209611 Ncbp3Q8BZR9 615 aaKnown RBP12.2□□□□□ -0.46
Sh3rf1-202ENSMUST00000209611 Abca14E9Q8F8 1683 aa12.2□□□□□ -0.46
Sh3rf1-202ENSMUST00000209611 BccipQ9CWI3 316 aa12.2□□□□□ -0.46
Sh3rf1-202ENSMUST00000209611 EspnQ9ET47 871 aa12.2□□□□□ -0.46
Sh3rf1-202ENSMUST00000209611 Tmem94Q7TSH8 1360 aa12.19□□□□□ -0.46
Sh3rf1-202ENSMUST00000209611 Gnai1B2RSH2 354 aa12.19□□□□□ -0.46
Sh3rf1-202ENSMUST00000209611 MpripP97434 1024 aa12.19□□□□□ -0.46
Sh3rf1-202ENSMUST00000209611 G3bp1P97855 465 aaKnown RBP12.19□□□□□ -0.46
Sh3rf1-202ENSMUST00000209611 Tmco5bQ80X59 307 aa12.19□□□□□ -0.46
Sh3rf1-202ENSMUST00000209611 Gnai3Q9DC51 354 aa12.19□□□□□ -0.46
Sh3rf1-202ENSMUST00000209611 PtpruB1AUH1 1446 aa12.19□□□□□ -0.46
Sh3rf1-202ENSMUST00000209611 Astn2Q80Z10 1352 aa12.19□□□□□ -0.46
Sh3rf1-202ENSMUST00000209611 Senp3Q9EP97 568 aaKnown RBP12.19□□□□□ -0.46
Sh3rf1-202ENSMUST00000209611 PaskQ8CEE6 1383 aa12.18□□□□□ -0.46
Sh3rf1-202ENSMUST00000209611 Cabp2Q9JLK4 216 aa12.18□□□□□ -0.46
Sh3rf1-202ENSMUST00000209611 Rtf1A2AQ19 715 aaKnown RBP12.18□□□□□ -0.46
Sh3rf1-202ENSMUST00000209611 Rtn4Q99P72 1162 aaKnown RBP12.18□□□□□ -0.46
Sh3rf1-202ENSMUST00000209611 AampJ3QN89 436 aa12.18□□□□□ -0.46
Sh3rf1-202ENSMUST00000209611 Znf330Q922H9 316 aa12.18□□□□□ -0.46
Sh3rf1-202ENSMUST00000209611 1700019A02RikA0A087WPV9 146 aa12.17□□□□□ -0.46
Sh3rf1-202ENSMUST00000209611 Rsph6aQ8CDR2 708 aa12.17□□□□□ -0.46
Sh3rf1-202ENSMUST00000209611 Ccdc171E9Q1U1 1324 aa12.17□□□□□ -0.46
Sh3rf1-202ENSMUST00000209611 Armcx1Q9CX83 456 aa12.17□□□□□ -0.46
Sh3rf1-202ENSMUST00000209611 Znf335A2A5K6 1337 aa12.17□□□□□ -0.46
Sh3rf1-202ENSMUST00000209611 Dnajc5P60904 198 aa12.16□□□□□ -0.46
Sh3rf1-202ENSMUST00000209611 Slit3Q9WVB4 1523 aa12.16□□□□□ -0.46
Sh3rf1-202ENSMUST00000209611 Dip2bQ3UH60 1574 aa12.16□□□□□ -0.46
Sh3rf1-202ENSMUST00000209611 Fyb1O35601 819 aa12.16□□□□□ -0.46
Sh3rf1-202ENSMUST00000209611 Idi1P58044 227 aa12.16□□□□□ -0.46
Sh3rf1-202ENSMUST00000209611 Tspyl2Q7TQI8 677 aa12.16□□□□□ -0.46
Sh3rf1-202ENSMUST00000209611 NktrP30415 1453 aa12.15□□□□□ -0.46
Sh3rf1-202ENSMUST00000209611 Plcd4Q8K3R3 807 aa12.15□□□□□ -0.46
Sh3rf1-202ENSMUST00000209611 CastP51125 788 aa12.15□□□□□ -0.46
Sh3rf1-202ENSMUST00000209611 Gtf3c3Q3TMP1 882 aa12.15□□□□□ -0.46
Sh3rf1-202ENSMUST00000209611 Usp16Q99LG0 825 aa12.15□□□□□ -0.46
Sh3rf1-202ENSMUST00000209611 Ttll13A4Q9F6 804 aa12.14□□□□□ -0.47
Sh3rf1-202ENSMUST00000209611 Cdc37l1Q9CZP7 335 aa12.14□□□□□ -0.47
Sh3rf1-202ENSMUST00000209611 Mcm10Q0VBD2 885 aa12.14□□□□□ -0.47
Sh3rf1-202ENSMUST00000209611 Adamtsl3G3UXC7 1706 aa12.14□□□□□ -0.47
Sh3rf1-202ENSMUST00000209611 Frmpd2A0A140LI67 1392 aa12.14□□□□□ -0.47
Sh3rf1-202ENSMUST00000209611 Chmp4bQ9D8B3 224 aaKnown RBP12.14□□□□□ -0.47
Sh3rf1-202ENSMUST00000209611 Trim30dE9PWL0 497 aa12.13□□□□□ -0.47
Sh3rf1-202ENSMUST00000209611 Eif4a2P10630 407 aa12.13□□□□□ -0.47
Sh3rf1-202ENSMUST00000209611 Cps1Q8C196 1500 aa12.13□□□□□ -0.47
Sh3rf1-202ENSMUST00000209611 TnikP83510 1323 aa12.13□□□□□ -0.47
Sh3rf1-202ENSMUST00000209611 Nwd1A6H603 1563 aa12.13□□□□□ -0.47
Sh3rf1-202ENSMUST00000209611 4930407I10RikD3Z5T8 1512 aa12.12□□□□□ -0.47
Sh3rf1-202ENSMUST00000209611 Rab11fip3Q8CHD8 1047 aa12.12□□□□□ -0.47
Sh3rf1-202ENSMUST00000209611 Uhrf1bp1lA2RSJ4 1457 aa12.12□□□□□ -0.47
Sh3rf1-202ENSMUST00000209611 Chd2E9PZM4 1827 aaKnown RBP12.12□□□□□ -0.47
Sh3rf1-202ENSMUST00000209611 Rreb1Q3UH06 1700 aaKnown RBP12.11□□□□□ -0.47
Sh3rf1-202ENSMUST00000209611 Iqsec2Q5DU25 1478 aa12.11□□□□□ -0.47
Sh3rf1-202ENSMUST00000209611 Q4VA45 678 aa12.11□□□□□ -0.47
Sh3rf1-202ENSMUST00000209611 Nectin2P32507 530 aa12.11□□□□□ -0.47
Sh3rf1-202ENSMUST00000209611 Pak3Q61036 559 aa12.11□□□□□ -0.47
Sh3rf1-202ENSMUST00000209611 Liat1Q810M6 228 aa12.11□□□□□ -0.47
Sh3rf1-202ENSMUST00000209611 Gimap6Q8K349 305 aa12.11□□□□□ -0.47
Sh3rf1-202ENSMUST00000209611 Ankrd50F7BE84 1390 aa12.11□□□□□ -0.47
Sh3rf1-202ENSMUST00000209611 Evi5lH3BKQ3 813 aa12.1□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 33.6 ms