RNA–Protein interactions for RNA: ENSMUST00000209364.1

Prpf40a-206, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40a, Length 2,833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-206ENSMUST00000209364 CanxP35564 591 aaKnown RBP16.47■□□□□ 0.23
Prpf40a-206ENSMUST00000209364 Armcx1Q9CX83 456 aa16.47■□□□□ 0.23
Prpf40a-206ENSMUST00000209364 Erbb3Q61526 1339 aa16.47■□□□□ 0.23
Prpf40a-206ENSMUST00000209364 Usp19Q3UJD6 1360 aa16.47■□□□□ 0.23
Prpf40a-206ENSMUST00000209364 Sart3Q9JLI8 962 aaKnown RBP16.46■□□□□ 0.22
Prpf40a-206ENSMUST00000209364 PzpQ61838 1495 aa16.45■□□□□ 0.22
Prpf40a-206ENSMUST00000209364 Nkx1-2P42580 305 aa16.44■□□□□ 0.22
Prpf40a-206ENSMUST00000209364 P2rx7Q9Z1M0 595 aa16.44■□□□□ 0.22
Prpf40a-206ENSMUST00000209364 Usp32F8VPZ3 1604 aa16.44■□□□□ 0.22
Prpf40a-206ENSMUST00000209364 NinlQ6ZQ12 1394 aa16.43■□□□□ 0.22
Prpf40a-206ENSMUST00000209364 Golga2Q921M4 999 aa16.43■□□□□ 0.22
Prpf40a-206ENSMUST00000209364 Arap3Q8R5G7 1538 aa16.42■□□□□ 0.22
Prpf40a-206ENSMUST00000209364 Pdlim2Q8R1G6 349 aa16.42■□□□□ 0.22
Prpf40a-206ENSMUST00000209364 Chrna2Q91X60 512 aa16.41■□□□□ 0.22
Prpf40a-206ENSMUST00000209364 GsdmaQ9EST1 446 aa16.41■□□□□ 0.22
Prpf40a-206ENSMUST00000209364 4930407I10RikD3Z5T8 1512 aa16.41■□□□□ 0.22
Prpf40a-206ENSMUST00000209364 Mre11Q61216 706 aa16.41■□□□□ 0.22
Prpf40a-206ENSMUST00000209364 Tnrc6bQ8BKI2 1810 aaKnown RBP16.41■□□□□ 0.22
Prpf40a-206ENSMUST00000209364 Pik3c2bE9QAN8 1632 aa16.41■□□□□ 0.22
Prpf40a-206ENSMUST00000209364 Pcdh10E9PXQ7 1057 aa16.41■□□□□ 0.22
Prpf40a-206ENSMUST00000209364 Map3k19E9Q3S4 1311 aa16.4■□□□□ 0.22
Prpf40a-206ENSMUST00000209364 Ttc41Q692V3 1318 aa16.4■□□□□ 0.22
Prpf40a-206ENSMUST00000209364 Pik3r4Q8VD65 1358 aa16.4■□□□□ 0.22
Prpf40a-206ENSMUST00000209364 Map4k4P97820 1233 aaKnown RBP16.39■□□□□ 0.21
Prpf40a-206ENSMUST00000209364 Rbm10Q99KG3 930 aaKnown RBP16.38■□□□□ 0.21
Prpf40a-206ENSMUST00000209364 Speer4f1Q9D5Q6 258 aa16.38■□□□□ 0.21
Prpf40a-206ENSMUST00000209364 Bcl9Q9D219 1425 aa16.38■□□□□ 0.21
Prpf40a-206ENSMUST00000209364 Uspl1Q3ULM6 1089 aa16.38■□□□□ 0.21
Prpf40a-206ENSMUST00000209364 Iqsec2Q5DU25 1478 aa16.37■□□□□ 0.21
Prpf40a-206ENSMUST00000209364 HnrnpmQ9D0E1 729 aaKnown RBP16.37■□□□□ 0.21
Prpf40a-206ENSMUST00000209364 Rreb1Q3UH06 1700 aaKnown RBP16.37■□□□□ 0.21
Prpf40a-206ENSMUST00000209364 PtpruB1AUH1 1446 aa16.36■□□□□ 0.21
Prpf40a-206ENSMUST00000209364 Kif1aP33173 1695 aa16.36■□□□□ 0.21
Prpf40a-206ENSMUST00000209364 Plekhh1Q80TI1 1356 aa16.35■□□□□ 0.21
Prpf40a-206ENSMUST00000209364 Lmtk3Q5XJV6 1424 aa16.34■□□□□ 0.21
Prpf40a-206ENSMUST00000209364 Idi2Q8BFZ6 227 aa16.34■□□□□ 0.21
Prpf40a-206ENSMUST00000209364 Ccdc30Q8BVF4 654 aa16.34■□□□□ 0.21
Prpf40a-206ENSMUST00000209364 Ralbp1Q62172 648 aa16.33■□□□□ 0.21
Prpf40a-206ENSMUST00000209364 Tsen2Q6P7W5 460 aa16.33■□□□□ 0.21
Prpf40a-206ENSMUST00000209364 Kif20bQ80WE4 1774 aaKnown RBP16.33■□□□□ 0.2
Prpf40a-206ENSMUST00000209364 Dnai1Q8C0M8 701 aa16.33■□□□□ 0.2
Prpf40a-206ENSMUST00000209364 N4bp2F8VQG7 1678 aaKnown RBP16.33■□□□□ 0.2
Prpf40a-206ENSMUST00000209364 D430041D05RikF6ZGR6 1678 aa16.33■□□□□ 0.2
Prpf40a-206ENSMUST00000209364 Neurod2Q62414 383 aa16.32■□□□□ 0.2
Prpf40a-206ENSMUST00000209364 Dnajc5P60904 198 aa16.32■□□□□ 0.2
Prpf40a-206ENSMUST00000209364 U2af1Q9D883 239 aaKnown RBP16.32■□□□□ 0.2
Prpf40a-206ENSMUST00000209364 Topaz1E5FYH1 1653 aa16.31■□□□□ 0.2
Prpf40a-206ENSMUST00000209364 Phf14Q9D4H9 881 aa16.3■□□□□ 0.2
Prpf40a-206ENSMUST00000209364 MyclP10166 368 aa16.3■□□□□ 0.2
Prpf40a-206ENSMUST00000209364 Zfp91Q62511 572 aa16.3■□□□□ 0.2
Prpf40a-206ENSMUST00000209364 GphnQ8BUV3 769 aaKnown RBP16.3■□□□□ 0.2
Prpf40a-206ENSMUST00000209364 Chd4Q6PDQ2 1915 aaKnown RBP16.29■□□□□ 0.2
Prpf40a-206ENSMUST00000209364 Q3UJC8 639 aa16.29■□□□□ 0.2
Prpf40a-206ENSMUST00000209364 Sirt1Q923E4 737 aa16.29■□□□□ 0.2
Prpf40a-206ENSMUST00000209364 Kif20aP97329 887 aa16.28■□□□□ 0.2
Prpf40a-206ENSMUST00000209364 Ttll13A4Q9F6 804 aa16.27■□□□□ 0.2
Prpf40a-206ENSMUST00000209364 C5P06684 1680 aa16.27■□□□□ 0.19
Prpf40a-206ENSMUST00000209364 Apaf1O88879 1249 aa16.26■□□□□ 0.19
Prpf40a-206ENSMUST00000209364 Trim28Q62318 834 aa16.26■□□□□ 0.19
Prpf40a-206ENSMUST00000209364 Rwdd1Q9CQK7 243 aa16.26■□□□□ 0.19
Prpf40a-206ENSMUST00000209364 Als2Q920R0 1651 aa16.26■□□□□ 0.19
Prpf40a-206ENSMUST00000209364 Ncbp3Q8BZR9 615 aaKnown RBP16.25■□□□□ 0.19
Prpf40a-206ENSMUST00000209364 Vgll3P85442 326 aa16.24■□□□□ 0.19
Prpf40a-206ENSMUST00000209364 Prkrip1Q9CWV6 186 aaKnown RBP16.24■□□□□ 0.19
Prpf40a-206ENSMUST00000209364 Alpk3Q924C5 1678 aa16.24■□□□□ 0.19
Prpf40a-206ENSMUST00000209364 Dusp27Q148W8 1138 aa16.24■□□□□ 0.19
Prpf40a-206ENSMUST00000209364 Abcc10Q8R4P9 1501 aa16.23■□□□□ 0.19
Prpf40a-206ENSMUST00000209364 Mon2Q80TL7 1715 aa16.23■□□□□ 0.19
Prpf40a-206ENSMUST00000209364 Znf541Q0GGX2 1363 aa16.23■□□□□ 0.19
Prpf40a-206ENSMUST00000209364 Rims2Q9EQZ7 1530 aa16.23■□□□□ 0.19
Prpf40a-206ENSMUST00000209364 Birc3O08863 600 aa16.23■□□□□ 0.19
Prpf40a-206ENSMUST00000209364 Slc12a5Q91V14 1138 aa16.23■□□□□ 0.19
Prpf40a-206ENSMUST00000209364 Atxn3Q9CVD2 355 aa16.23■□□□□ 0.19
Prpf40a-206ENSMUST00000209364 TimelessQ9R1X4 1197 aa16.23■□□□□ 0.19
Prpf40a-206ENSMUST00000209364 Ppm1gQ61074 542 aa16.22■□□□□ 0.19
Prpf40a-206ENSMUST00000209364 Paxip1Q6NZQ4 1056 aa16.22■□□□□ 0.19
Prpf40a-206ENSMUST00000209364 Gas2l2Q5SSG4 860 aa16.21■□□□□ 0.19
Prpf40a-206ENSMUST00000209364 Znf335A2A5K6 1337 aa16.21■□□□□ 0.19
Prpf40a-206ENSMUST00000209364 Ppp1r15aP17564 657 aa16.21■□□□□ 0.19
Prpf40a-206ENSMUST00000209364 Tex2Q6ZPJ0 1128 aaKnown RBP16.21■□□□□ 0.19
Prpf40a-206ENSMUST00000209364 Mbd3Q9Z2D8 285 aaKnown RBP16.21■□□□□ 0.19
Prpf40a-206ENSMUST00000209364 Mapk8ip3Q9ESN9 1337 aa16.2■□□□□ 0.18
Prpf40a-206ENSMUST00000209364 TnikP83510 1323 aa16.2■□□□□ 0.18
Prpf40a-206ENSMUST00000209364 Hoxb7P09024 217 aa16.2■□□□□ 0.18
Prpf40a-206ENSMUST00000209364 Astn2Q80Z10 1352 aa16.2■□□□□ 0.18
Prpf40a-206ENSMUST00000209364 4933402E13RikQ9D4D2 429 aa16.19■□□□□ 0.18
Prpf40a-206ENSMUST00000209364 Mdc1Q5PSV9 1707 aa16.19■□□□□ 0.18
Prpf40a-206ENSMUST00000209364 NalcnQ8BXR5 1738 aa16.19■□□□□ 0.18
Prpf40a-206ENSMUST00000209364 Rimbp3Q3V0F0 1606 aa16.19■□□□□ 0.18
Prpf40a-206ENSMUST00000209364 Uhrf1bp1lA2RSJ4 1457 aa16.19■□□□□ 0.18
Prpf40a-206ENSMUST00000209364 Ciz1Q8VEH2 845 aa16.18■□□□□ 0.18
Prpf40a-206ENSMUST00000209364 PalmQ9Z0P4 383 aa16.18■□□□□ 0.18
Prpf40a-206ENSMUST00000209364 Spef2Q8C9J3 1734 aa16.18■□□□□ 0.18
Prpf40a-206ENSMUST00000209364 Fchsd2Q3USJ8 740 aa16.18■□□□□ 0.18
Prpf40a-206ENSMUST00000209364 Uhrf1bp1B2KF50 1429 aa16.18■□□□□ 0.18
Prpf40a-206ENSMUST00000209364 NudcO35685 332 aaKnown RBP16.18■□□□□ 0.18
Prpf40a-206ENSMUST00000209364 MlecQ6ZQI3 291 aaKnown RBP16.18■□□□□ 0.18
Prpf40a-206ENSMUST00000209364 Pik3c2aQ61194 1686 aa16.17■□□□□ 0.18
Prpf40a-206ENSMUST00000209364 Nom1Q3UFM5 854 aaKnown RBP16.17■□□□□ 0.18
Prpf40a-206ENSMUST00000209364 IbspQ61711 324 aa16.17■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 24.9 ms