RNA–Protein interactions for RNA: ENSMUST00000176686.7

Cpsf6-207, Transcript of Cleavage and polyadenylation specificity factor subunit 6, mousemouse

TSL 1 (best) BASIC

Gene Cpsf6, Length 2,200 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6-207ENSMUST00000176686 Adamtsl3G3UXC7 1706 aa19.08■□□□□ 0.65
Cpsf6-207ENSMUST00000176686 AampJ3QN89 436 aa19.07■□□□□ 0.64
Cpsf6-207ENSMUST00000176686 Asxl2Q8BZ32 1370 aa19.07■□□□□ 0.64
Cpsf6-207ENSMUST00000176686 Polr3glQ8R0C0 218 aa19.06■□□□□ 0.64
Cpsf6-207ENSMUST00000176686 Ksr2Q3UVC0 959 aa19.06■□□□□ 0.64
Cpsf6-207ENSMUST00000176686 Fam135bQ9DAI6 1403 aa19.06■□□□□ 0.64
Cpsf6-207ENSMUST00000176686 Dusp27Q148W8 1138 aa19.05■□□□□ 0.64
Cpsf6-207ENSMUST00000176686 FanciQ8K368 1330 aa19.05■□□□□ 0.64
Cpsf6-207ENSMUST00000176686 Dip2aQ8BWT5 1523 aa19.05■□□□□ 0.64
Cpsf6-207ENSMUST00000176686 Ccar1Q8CH18 1146 aaKnown RBP19.04■□□□□ 0.64
Cpsf6-207ENSMUST00000176686 ChgaP26339 463 aaKnown RBP19.04■□□□□ 0.64
Cpsf6-207ENSMUST00000176686 Map3k19E9Q3S4 1311 aa19.03■□□□□ 0.64
Cpsf6-207ENSMUST00000176686 Znf541Q0GGX2 1363 aa19.03■□□□□ 0.64
Cpsf6-207ENSMUST00000176686 Duxf3A0A0N4SV92 674 aa19.02■□□□□ 0.64
Cpsf6-207ENSMUST00000176686 Ciz1Q8VEH2 845 aa19.02■□□□□ 0.64
Cpsf6-207ENSMUST00000176686 Usp32F8VPZ3 1604 aa19.02■□□□□ 0.64
Cpsf6-207ENSMUST00000176686 NudcO35685 332 aaKnown RBP19.02■□□□□ 0.64
Cpsf6-207ENSMUST00000176686 Rlbp1Q9Z275 317 aa19.02■□□□□ 0.64
Cpsf6-207ENSMUST00000176686 Cypt1Q8CH20 168 aa19.01■□□□□ 0.63
Cpsf6-207ENSMUST00000176686 Trim28Q62318 834 aa19■□□□□ 0.63
Cpsf6-207ENSMUST00000176686 Uhrf1bp1B2KF50 1429 aa19■□□□□ 0.63
Cpsf6-207ENSMUST00000176686 Nkx1-2P42580 305 aa19■□□□□ 0.63
Cpsf6-207ENSMUST00000176686 Trim26Q99PN3 545 aa19■□□□□ 0.63
Cpsf6-207ENSMUST00000176686 Slc12a5Q91V14 1138 aa18.99■□□□□ 0.63
Cpsf6-207ENSMUST00000176686 IghaA0A0A6YXW6 389 aa18.98■□□□□ 0.63
Cpsf6-207ENSMUST00000176686 CanxP35564 591 aaKnown RBP18.98■□□□□ 0.63
Cpsf6-207ENSMUST00000176686 Cavin4A2AMM0 362 aa18.97■□□□□ 0.63
Cpsf6-207ENSMUST00000176686 Chd2E9PZM4 1827 aaKnown RBP18.96■□□□□ 0.63
Cpsf6-207ENSMUST00000176686 Q4VA45 678 aa18.96■□□□□ 0.63
Cpsf6-207ENSMUST00000176686 Ttc21aQ8C0S4 1314 aa18.95■□□□□ 0.62
Cpsf6-207ENSMUST00000176686 Trim30dE9PWL0 497 aa18.95■□□□□ 0.62
Cpsf6-207ENSMUST00000176686 Ppp1r3fQ9JIG4 799 aa18.95■□□□□ 0.62
Cpsf6-207ENSMUST00000176686 Safb2Q80YR5 991 aaKnown RBP18.94■□□□□ 0.62
Cpsf6-207ENSMUST00000176686 PaskQ8CEE6 1383 aa18.94■□□□□ 0.62
Cpsf6-207ENSMUST00000176686 CastP51125 788 aa18.94■□□□□ 0.62
Cpsf6-207ENSMUST00000176686 Ecm2Q5FW85 670 aa18.94■□□□□ 0.62
Cpsf6-207ENSMUST00000176686 Ppm1gQ61074 542 aa18.94■□□□□ 0.62
Cpsf6-207ENSMUST00000176686 Ankrd50F7BE84 1390 aa18.94■□□□□ 0.62
Cpsf6-207ENSMUST00000176686 Iqcf3Q9D498 203 aa18.93■□□□□ 0.62
Cpsf6-207ENSMUST00000176686 PalmQ9Z0P4 383 aa18.93■□□□□ 0.62
Cpsf6-207ENSMUST00000176686 Gemin5Q8BX17 1502 aaKnown RBP18.92■□□□□ 0.62
Cpsf6-207ENSMUST00000176686 Fchsd2Q3USJ8 740 aa18.92■□□□□ 0.62
Cpsf6-207ENSMUST00000176686 Cps1Q8C196 1500 aa18.92■□□□□ 0.62
Cpsf6-207ENSMUST00000176686 Kif1aP33173 1695 aa18.92■□□□□ 0.62
Cpsf6-207ENSMUST00000176686 Psme1P97371 249 aa18.92■□□□□ 0.62
Cpsf6-207ENSMUST00000176686 Ipo8Q7TMY7 1010 aa18.92■□□□□ 0.62
Cpsf6-207ENSMUST00000176686 Dnai1Q8C0M8 701 aa18.92■□□□□ 0.62
Cpsf6-207ENSMUST00000176686 Pik3r4Q8VD65 1358 aa18.91■□□□□ 0.62
Cpsf6-207ENSMUST00000176686 PtpruB1AUH1 1446 aa18.91■□□□□ 0.62
Cpsf6-207ENSMUST00000176686 Txndc2Q6P902 515 aa18.9■□□□□ 0.62
Cpsf6-207ENSMUST00000176686 Atp7bQ64446 1462 aa18.9■□□□□ 0.62
Cpsf6-207ENSMUST00000176686 Pik3c2bE9QAN8 1632 aa18.9■□□□□ 0.62
Cpsf6-207ENSMUST00000176686 Idi2Q8BFZ6 227 aa18.89■□□□□ 0.61
Cpsf6-207ENSMUST00000176686 Znf316Q6PGE4 1016 aa18.89■□□□□ 0.61
Cpsf6-207ENSMUST00000176686 Slit3Q9WVB4 1523 aa18.89■□□□□ 0.61
Cpsf6-207ENSMUST00000176686 Ppp1r15aP17564 657 aa18.88■□□□□ 0.61
Cpsf6-207ENSMUST00000176686 4930567H17RikQ3V0K5 233 aa18.88■□□□□ 0.61
Cpsf6-207ENSMUST00000176686 Ak7Q9D2H2 614 aa18.88■□□□□ 0.61
Cpsf6-207ENSMUST00000176686 Swt1Q9DBQ9 907 aa18.88■□□□□ 0.61
Cpsf6-207ENSMUST00000176686 Chd4Q6PDQ2 1915 aaKnown RBP18.88■□□□□ 0.61
Cpsf6-207ENSMUST00000176686 Uhrf1bp1lA2RSJ4 1457 aa18.88■□□□□ 0.61
Cpsf6-207ENSMUST00000176686 Ccdc183A2AJB1 534 aa18.88■□□□□ 0.61
Cpsf6-207ENSMUST00000176686 Rbm25B2RY56 838 aaKnown RBP18.88■□□□□ 0.61
Cpsf6-207ENSMUST00000176686 Dip2bQ3UH60 1574 aa18.87■□□□□ 0.61
Cpsf6-207ENSMUST00000176686 Tmc1Q8R4P5 757 aa18.87■□□□□ 0.61
Cpsf6-207ENSMUST00000176686 Ccdc171E9Q1U1 1324 aa18.87■□□□□ 0.61
Cpsf6-207ENSMUST00000176686 Birc3O08863 600 aa18.86■□□□□ 0.61
Cpsf6-207ENSMUST00000176686 Armcx1Q9CX83 456 aa18.86■□□□□ 0.61
Cpsf6-207ENSMUST00000176686 Tnrc6bQ8BKI2 1810 aaKnown RBP18.86■□□□□ 0.61
Cpsf6-207ENSMUST00000176686 Spef2Q8C9J3 1734 aa18.86■□□□□ 0.61
Cpsf6-207ENSMUST00000176686 Hsp90ab1P11499 724 aaKnown RBP18.85■□□□□ 0.61
Cpsf6-207ENSMUST00000176686 Atl3Q91YH5 541 aa18.85■□□□□ 0.61
Cpsf6-207ENSMUST00000176686 Ccdc60Q8C4J0 545 aa18.85■□□□□ 0.61
Cpsf6-207ENSMUST00000176686 Hsp90aa1P07901 733 aaKnown RBP18.84■□□□□ 0.61
Cpsf6-207ENSMUST00000176686 Scn4aQ9ER60 1841 aa18.83■□□□□ 0.61
Cpsf6-207ENSMUST00000176686 Ppp2r3aB2RXC8 1150 aa18.83■□□□□ 0.6
Cpsf6-207ENSMUST00000176686 Sart3Q9JLI8 962 aaKnown RBP18.83■□□□□ 0.6
Cpsf6-207ENSMUST00000176686 Mre11Q61216 706 aa18.81■□□□□ 0.6
Cpsf6-207ENSMUST00000176686 CatipB9EKE5 520 aa18.81■□□□□ 0.6
Cpsf6-207ENSMUST00000176686 G3bp1P97855 465 aaKnown RBP18.81■□□□□ 0.6
Cpsf6-207ENSMUST00000176686 Rsph6aQ8CDR2 708 aa18.81■□□□□ 0.6
Cpsf6-207ENSMUST00000176686 Bcl11aQ9QYE3 773 aa18.81■□□□□ 0.6
Cpsf6-207ENSMUST00000176686 Maco1Q7TQE6 664 aaKnown RBP18.8■□□□□ 0.6
Cpsf6-207ENSMUST00000176686 HnrnpmQ9D0E1 729 aaKnown RBP18.8■□□□□ 0.6
Cpsf6-207ENSMUST00000176686 Eif2s2Q99L45 331 aaKnown RBP18.79■□□□□ 0.6
Cpsf6-207ENSMUST00000176686 Hs1bp3Q3TC93 395 aa18.78■□□□□ 0.6
Cpsf6-207ENSMUST00000176686 PzpQ61838 1495 aa18.78■□□□□ 0.6
Cpsf6-207ENSMUST00000176686 N4bp2F8VQG7 1678 aaKnown RBP18.78■□□□□ 0.6
Cpsf6-207ENSMUST00000176686 Pnmal2G3X9N3 661 aa18.78■□□□□ 0.6
Cpsf6-207ENSMUST00000176686 Cdc37l1Q9CZP7 335 aa18.78■□□□□ 0.6
Cpsf6-207ENSMUST00000176686 Arap3Q8R5G7 1538 aa18.78■□□□□ 0.6
Cpsf6-207ENSMUST00000176686 Hoxb7P09024 217 aa18.77■□□□□ 0.6
Cpsf6-207ENSMUST00000176686 Mcm10Q0VBD2 885 aa18.77■□□□□ 0.6
Cpsf6-207ENSMUST00000176686 Cluap1Q8R3P7 413 aa18.77■□□□□ 0.6
Cpsf6-207ENSMUST00000176686 AU019823E9PUQ3 292 aa18.77■□□□□ 0.59
Cpsf6-207ENSMUST00000176686 Ccdc9Q8VC31 543 aaKnown RBP18.77■□□□□ 0.59
Cpsf6-207ENSMUST00000176686 Znf330Q922H9 316 aa18.77■□□□□ 0.59
Cpsf6-207ENSMUST00000176686 KarsQ99MN1 595 aaKnown RBP18.77■□□□□ 0.59
Cpsf6-207ENSMUST00000176686 Gm6268A2A3U9 297 aa18.76■□□□□ 0.59
Cpsf6-207ENSMUST00000176686 Vamp4O70480 141 aa18.76■□□□□ 0.59
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms