RNA–Protein interactions for RNA: ENSMUST00000176686.7

Cpsf6-207, Transcript of Cleavage and polyadenylation specificity factor subunit 6, mousemouse

TSL 1 (best) BASIC

Gene Cpsf6, Length 2,200 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6-207ENSMUST00000176686 NischQ80TM9 1593 aa29.15■■■□□ 2.26
Cpsf6-207ENSMUST00000176686 Gm35339A0A140LHH9 1649 aa28.81■■■□□ 2.2
Cpsf6-207ENSMUST00000176686 Abcc9P70170 1546 aa28.35■■■□□ 2.13
Cpsf6-207ENSMUST00000176686 Abcc8B2RUS7 1588 aa27.75■■■□□ 2.03
Cpsf6-207ENSMUST00000176686 Rhox8Q6VSS7 320 aa26.7■■□□□ 1.87
Cpsf6-207ENSMUST00000176686 Rtl1Q7M732 1744 aa26.41■■□□□ 1.82
Cpsf6-207ENSMUST00000176686 ScribQ80U72 1612 aa25.96■■□□□ 1.75
Cpsf6-207ENSMUST00000176686 Ccdc180J3QNE4 1664 aa25.89■■□□□ 1.73
Cpsf6-207ENSMUST00000176686 Dcaf1Q80TR8 1506 aa25.88■■□□□ 1.73
Cpsf6-207ENSMUST00000176686 Zcchc6Q5BLK4 1491 aaKnown RBP25.61■■□□□ 1.69
Cpsf6-207ENSMUST00000176686 Rb1cc1Q9ESK9 1588 aa25.53■■□□□ 1.68
Cpsf6-207ENSMUST00000176686 Kdm5dQ62240 1548 aa25.41■■□□□ 1.66
Cpsf6-207ENSMUST00000176686 Baz1aO88379 1555 aa25.24■■□□□ 1.63
Cpsf6-207ENSMUST00000176686 NacadQ5SWP3 1504 aa25.18■■□□□ 1.62
Cpsf6-207ENSMUST00000176686 Ccdc136Q3TVA9 1136 aa24.82■■□□□ 1.56
Cpsf6-207ENSMUST00000176686 Crybg2B7ZCC2 1516 aa24.81■■□□□ 1.56
Cpsf6-207ENSMUST00000176686 Smarca2Q6DIC0 1577 aa24.7■■□□□ 1.54
Cpsf6-207ENSMUST00000176686 Sycp2Q9CUU3 1500 aa24.66■■□□□ 1.54
Cpsf6-207ENSMUST00000176686 HrcG5E8J6 738 aa24.66■■□□□ 1.54
Cpsf6-207ENSMUST00000176686 Dnajc5bQ9CQ94 199 aa24.56■■□□□ 1.52
Cpsf6-207ENSMUST00000176686 Trim41Q5NCC3 630 aa24.31■■□□□ 1.48
Cpsf6-207ENSMUST00000176686 Rpgrip1Q9EPQ2 1331 aa24.3■■□□□ 1.48
Cpsf6-207ENSMUST00000176686 BicraF8VPZ9 1578 aa24.18■■□□□ 1.46
Cpsf6-207ENSMUST00000176686 Cecr2E9Q2Z1 1453 aa24.11■■□□□ 1.45
Cpsf6-207ENSMUST00000176686 Cep164Q5DU05 1446 aa24.01■■□□□ 1.43
Cpsf6-207ENSMUST00000176686 Brd4Q9ESU6 1400 aaKnown RBP24■■□□□ 1.43
Cpsf6-207ENSMUST00000176686 Acin1Q9JIX8 1338 aaKnown RBP23.93■■□□□ 1.42
Cpsf6-207ENSMUST00000176686 Synj1Q8CHC4 1574 aa23.89■■□□□ 1.42
Cpsf6-207ENSMUST00000176686 Ehmt2Q9Z148 1263 aaKnown RBP23.86■■□□□ 1.41
Cpsf6-207ENSMUST00000176686 Rsf1E9PWW9 1441 aaKnown RBP23.8■■□□□ 1.4
Cpsf6-207ENSMUST00000176686 Golga3P55937 1487 aa23.76■■□□□ 1.39
Cpsf6-207ENSMUST00000176686 CftrP26361 1476 aa23.74■■□□□ 1.39
Cpsf6-207ENSMUST00000176686 Cngb1E1AZ71 1325 aa23.72■■□□□ 1.39
Cpsf6-207ENSMUST00000176686 Chic1Q8CBW7 227 aa23.71■■□□□ 1.39
Cpsf6-207ENSMUST00000176686 Ccdc88bQ4QRL3 1481 aa23.66■■□□□ 1.38
Cpsf6-207ENSMUST00000176686 Cttnbp2B9EJA2 1648 aa23.62■■□□□ 1.37
Cpsf6-207ENSMUST00000176686 Top2bQ64511 1612 aa23.58■■□□□ 1.36
Cpsf6-207ENSMUST00000176686 Smarca4Q3TKT4 1613 aaKnown RBP23.56■■□□□ 1.36
Cpsf6-207ENSMUST00000176686 Thoc2B1AZI6 1594 aaKnown RBP23.5■■□□□ 1.35
Cpsf6-207ENSMUST00000176686 Esf1Q3V1V3 845 aaKnown RBP23.4■■□□□ 1.34
Cpsf6-207ENSMUST00000176686 Gab3Q8BSM5 595 aa23.39■■□□□ 1.33
Cpsf6-207ENSMUST00000176686 Pds5bQ4VA53 1446 aaKnown RBP23.37■■□□□ 1.33
Cpsf6-207ENSMUST00000176686 Cc2d2aQ8CFW7 1633 aa23.33■■□□□ 1.32
Cpsf6-207ENSMUST00000176686 Iqgap2Q3UQ44 1575 aa23.25■■□□□ 1.31
Cpsf6-207ENSMUST00000176686 Fmn1Q05860 1466 aa23.15■■□□□ 1.3
Cpsf6-207ENSMUST00000176686 Atad2bE9Q166 1460 aaKnown RBP23.13■■□□□ 1.29
Cpsf6-207ENSMUST00000176686 Top2aQ01320 1528 aaKnown RBP23.08■■□□□ 1.28
Cpsf6-207ENSMUST00000176686 Rapgef2Q8CHG7 1496 aa23.03■■□□□ 1.28
Cpsf6-207ENSMUST00000176686 Ercc6F8VPZ5 1481 aa22.87■■□□□ 1.25
Cpsf6-207ENSMUST00000176686 TnnQ80Z71 1560 aa22.87■■□□□ 1.25
Cpsf6-207ENSMUST00000176686 Frmpd1A2AKB4 1549 aa22.82■■□□□ 1.24
Cpsf6-207ENSMUST00000176686 Cep162Q6ZQ06 1403 aa22.81■■□□□ 1.24
Cpsf6-207ENSMUST00000176686 Wdr62Q3U3T8 1523 aa22.81■■□□□ 1.24
Cpsf6-207ENSMUST00000176686 Pcgf6Q99NA9 353 aa22.8■■□□□ 1.24
Cpsf6-207ENSMUST00000176686 Fam135aQ6NS59 1506 aa22.79■■□□□ 1.24
Cpsf6-207ENSMUST00000176686 Eif4g1Q6NZJ6 1600 aaKnown RBP22.74■■□□□ 1.23
Cpsf6-207ENSMUST00000176686 Mier1Q5UAK0 511 aa22.73■■□□□ 1.23
Cpsf6-207ENSMUST00000176686 Dnajc5P60904 198 aa22.7■■□□□ 1.23
Cpsf6-207ENSMUST00000176686 NefmP08553 848 aa22.67■■□□□ 1.22
Cpsf6-207ENSMUST00000176686 Lamc3Q9R0B6 1581 aa22.66■■□□□ 1.22
Cpsf6-207ENSMUST00000176686 Unc13aQ4KUS2 1712 aa22.64■■□□□ 1.22
Cpsf6-207ENSMUST00000176686 Npm2Q80W85 207 aa22.55■■□□□ 1.2
Cpsf6-207ENSMUST00000176686 Myt1lP97500 1187 aa22.55■■□□□ 1.2
Cpsf6-207ENSMUST00000176686 Supt5hO55201 1082 aaKnown RBP22.52■■□□□ 1.2
Cpsf6-207ENSMUST00000176686 PtprkP35822 1457 aa22.51■■□□□ 1.19
Cpsf6-207ENSMUST00000176686 NrkQ9R0G8 1455 aa22.49■■□□□ 1.19
Cpsf6-207ENSMUST00000176686 Phldb1Q6PDH0 1371 aaKnown RBP22.49■■□□□ 1.19
Cpsf6-207ENSMUST00000176686 Arhgap35Q91YM2 1499 aa22.48■■□□□ 1.19
Cpsf6-207ENSMUST00000176686 Kif15Q6P9L6 1387 aa22.48■■□□□ 1.19
Cpsf6-207ENSMUST00000176686 Camsap1A2AHC3 1581 aa22.46■■□□□ 1.19
Cpsf6-207ENSMUST00000176686 UbtfP25976 765 aaKnown RBP22.45■■□□□ 1.18
Cpsf6-207ENSMUST00000176686 Zeb1Q64318 1117 aa22.39■■□□□ 1.18
Cpsf6-207ENSMUST00000176686 Ubl4bQ9CQ84 188 aa22.39■■□□□ 1.18
Cpsf6-207ENSMUST00000176686 Clip1Q922J3 1391 aa22.39■■□□□ 1.18
Cpsf6-207ENSMUST00000176686 Shroom4Q1W617 1475 aa22.37■■□□□ 1.17
Cpsf6-207ENSMUST00000176686 Il27Q8K3I6 234 aa22.31■■□□□ 1.16
Cpsf6-207ENSMUST00000176686 Grin2bQ01097 1482 aa22.29■■□□□ 1.16
Cpsf6-207ENSMUST00000176686 Map3k1P53349 1493 aa22.28■■□□□ 1.16
Cpsf6-207ENSMUST00000176686 Baz1bQ9Z277 1479 aa22.28■■□□□ 1.16
Cpsf6-207ENSMUST00000176686 Mrc2Q64449 1479 aa22.27■■□□□ 1.16
Cpsf6-207ENSMUST00000176686 Arap1Q4LDD4 1452 aa22.25■■□□□ 1.15
Cpsf6-207ENSMUST00000176686 Ccdc18Q640L5 1455 aa22.24■■□□□ 1.15
Cpsf6-207ENSMUST00000176686 Plekhg3Q4VAC9 1341 aa22.23■■□□□ 1.15
Cpsf6-207ENSMUST00000176686 Eea1Q8BL66 1411 aa22.2■■□□□ 1.14
Cpsf6-207ENSMUST00000176686 Ncapd3Q6ZQK0 1506 aa22.18■■□□□ 1.14
Cpsf6-207ENSMUST00000176686 Mroh2bQ7M6Y6 1581 aa22.16■■□□□ 1.14
Cpsf6-207ENSMUST00000176686 Arhgef5E9Q7D5 1581 aa22.16■■□□□ 1.14
Cpsf6-207ENSMUST00000176686 Cux2P70298 1426 aa22.13■■□□□ 1.13
Cpsf6-207ENSMUST00000176686 Setd5Q5XJV7 1441 aa22.1■■□□□ 1.13
Cpsf6-207ENSMUST00000176686 Las1lA2BE28 776 aaKnown RBP22.09■■□□□ 1.13
Cpsf6-207ENSMUST00000176686 Sall2Q9QX96 1004 aa22.07■■□□□ 1.12
Cpsf6-207ENSMUST00000176686 Erich3F6QRE9 1637 aa22.07■■□□□ 1.12
Cpsf6-207ENSMUST00000176686 AqrQ8CFQ3 1481 aaKnown RBP22.06■■□□□ 1.12
Cpsf6-207ENSMUST00000176686 Ankrd26Q811D2 1581 aa22.05■■□□□ 1.12
Cpsf6-207ENSMUST00000176686 Tiam1Q60610 1591 aa22.01■■□□□ 1.11
Cpsf6-207ENSMUST00000176686 Efcab5A0JP43 1406 aa22■■□□□ 1.11
Cpsf6-207ENSMUST00000176686 Ap3b1Q9Z1T1 1105 aa21.99■■□□□ 1.11
Cpsf6-207ENSMUST00000176686 LrpprcQ6PB66 1392 aaKnown RBP21.97■■□□□ 1.11
Cpsf6-207ENSMUST00000176686 PogzQ8BZH4 1409 aaKnown RBP21.96■■□□□ 1.11
Cpsf6-207ENSMUST00000176686 Kdm5bQ80Y84 1544 aa21.94■■□□□ 1.1
Retrieved 100 of 22,080 RNA–protein pairs in 15.9 ms