RNA–Protein interactions for RNA: ENSMUST00000173347.7

Lig3-210, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lig3, Length 3,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-210ENSMUST00000173347 Ppp4r2Q0VGB7 417 aa14.14□□□□□ -0.15
Lig3-210ENSMUST00000173347 Trim28Q62318 834 aa14.13□□□□□ -0.15
Lig3-210ENSMUST00000173347 Topaz1E5FYH1 1653 aa14.13□□□□□ -0.15
Lig3-210ENSMUST00000173347 Znf335A2A5K6 1337 aa14.13□□□□□ -0.15
Lig3-210ENSMUST00000173347 Hoxb7P09024 217 aa14.13□□□□□ -0.15
Lig3-210ENSMUST00000173347 Ncbp3Q8BZR9 615 aaKnown RBP14.13□□□□□ -0.15
Lig3-210ENSMUST00000173347 Ciz1Q8VEH2 845 aa14.12□□□□□ -0.15
Lig3-210ENSMUST00000173347 Ppp1r15aP17564 657 aa14.11□□□□□ -0.15
Lig3-210ENSMUST00000173347 Kif20bQ80WE4 1774 aaKnown RBP14.11□□□□□ -0.15
Lig3-210ENSMUST00000173347 Slc12a5Q91V14 1138 aa14.11□□□□□ -0.15
Lig3-210ENSMUST00000173347 Mbd3Q9Z2D8 285 aaKnown RBP14.11□□□□□ -0.15
Lig3-210ENSMUST00000173347 Astn2Q80Z10 1352 aa14.11□□□□□ -0.15
Lig3-210ENSMUST00000173347 Gm10563F6WIE4 79 aa14.1□□□□□ -0.15
Lig3-210ENSMUST00000173347 D430041D05RikF6ZGR6 1678 aa14.1□□□□□ -0.15
Lig3-210ENSMUST00000173347 Sox12Q04890 314 aa14.1□□□□□ -0.15
Lig3-210ENSMUST00000173347 Ap3b2Q9JME5 1082 aa14.1□□□□□ -0.15
Lig3-210ENSMUST00000173347 N4bp2F8VQG7 1678 aaKnown RBP14.1□□□□□ -0.15
Lig3-210ENSMUST00000173347 Alpk3Q924C5 1678 aa14.1□□□□□ -0.15
Lig3-210ENSMUST00000173347 Fchsd2Q3USJ8 740 aa14.09□□□□□ -0.15
Lig3-210ENSMUST00000173347 Rims2Q9EQZ7 1530 aa14.09□□□□□ -0.15
Lig3-210ENSMUST00000173347 Tmem94Q7TSH8 1360 aa14.09□□□□□ -0.15
Lig3-210ENSMUST00000173347 Abcc10Q8R4P9 1501 aa14.09□□□□□ -0.15
Lig3-210ENSMUST00000173347 Cavin4A2AMM0 362 aa14.08□□□□□ -0.15
Lig3-210ENSMUST00000173347 Atxn3Q9CVD2 355 aa14.08□□□□□ -0.15
Lig3-210ENSMUST00000173347 Chd4Q6PDQ2 1915 aaKnown RBP14.08□□□□□ -0.16
Lig3-210ENSMUST00000173347 Dusp27Q148W8 1138 aa14.08□□□□□ -0.16
Lig3-210ENSMUST00000173347 PalmQ9Z0P4 383 aa14.08□□□□□ -0.16
Lig3-210ENSMUST00000173347 Idi1P58044 227 aa14.07□□□□□ -0.16
Lig3-210ENSMUST00000173347 Prkrip1Q9CWV6 186 aaKnown RBP14.07□□□□□ -0.16
Lig3-210ENSMUST00000173347 C5P06684 1680 aa14.06□□□□□ -0.16
Lig3-210ENSMUST00000173347 Znf541Q0GGX2 1363 aa14.06□□□□□ -0.16
Lig3-210ENSMUST00000173347 Kcnh8P59111 1102 aa14.06□□□□□ -0.16
Lig3-210ENSMUST00000173347 Apbb1Q9QXJ1 710 aa14.06□□□□□ -0.16
Lig3-210ENSMUST00000173347 DiexfQ8BTT6 772 aaKnown RBP14.05□□□□□ -0.16
Lig3-210ENSMUST00000173347 Als2Q920R0 1651 aa14.05□□□□□ -0.16
Lig3-210ENSMUST00000173347 PaskQ8CEE6 1383 aa14.05□□□□□ -0.16
Lig3-210ENSMUST00000173347 Rimbp3Q3V0F0 1606 aa14.05□□□□□ -0.16
Lig3-210ENSMUST00000173347 Uhrf1bp1lA2RSJ4 1457 aa14.05□□□□□ -0.16
Lig3-210ENSMUST00000173347 Ksr2Q3UVC0 959 aa14.04□□□□□ -0.16
Lig3-210ENSMUST00000173347 Nolc1E9Q5C9 702 aaKnown RBP14.04□□□□□ -0.16
Lig3-210ENSMUST00000173347 Rsph6aQ8CDR2 708 aa14.03□□□□□ -0.16
Lig3-210ENSMUST00000173347 Mon2Q80TL7 1715 aa14.03□□□□□ -0.16
Lig3-210ENSMUST00000173347 Tns3Q5SSZ5 1440 aa14.03□□□□□ -0.16
Lig3-210ENSMUST00000173347 CemipQ8BI06 1361 aa14.03□□□□□ -0.16
Lig3-210ENSMUST00000173347 Gas2l2Q5SSG4 860 aa14.03□□□□□ -0.16
Lig3-210ENSMUST00000173347 Ccar1Q8CH18 1146 aaKnown RBP14.03□□□□□ -0.16
Lig3-210ENSMUST00000173347 Polr3glQ8R0C0 218 aa14.03□□□□□ -0.16
Lig3-210ENSMUST00000173347 Swt1Q9DBQ9 907 aa14.02□□□□□ -0.16
Lig3-210ENSMUST00000173347 Uhrf1bp1B2KF50 1429 aa14.02□□□□□ -0.17
Lig3-210ENSMUST00000173347 Cdk12Q14AX6 1484 aaKnown RBP14.02□□□□□ -0.17
Lig3-210ENSMUST00000173347 Med1Q925J9 1575 aa14.02□□□□□ -0.17
Lig3-210ENSMUST00000173347 Zfp777B9EKF4 885 aa14.01□□□□□ -0.17
Lig3-210ENSMUST00000173347 TnikP83510 1323 aa14.01□□□□□ -0.17
Lig3-210ENSMUST00000173347 Dennd6aQ8BH65 605 aa14.01□□□□□ -0.17
Lig3-210ENSMUST00000173347 Frmpd2A0A140LI67 1392 aa14□□□□□ -0.17
Lig3-210ENSMUST00000173347 Q4VA45 678 aa14□□□□□ -0.17
Lig3-210ENSMUST00000173347 Gm21190A0A0G2JGJ6 266 aa14□□□□□ -0.17
Lig3-210ENSMUST00000173347 Iqcf3Q9D498 203 aa14□□□□□ -0.17
Lig3-210ENSMUST00000173347 Fam135bQ9DAI6 1403 aa13.99□□□□□ -0.17
Lig3-210ENSMUST00000173347 C3P01027 1663 aa13.99□□□□□ -0.17
Lig3-210ENSMUST00000173347 NudcO35685 332 aaKnown RBP13.99□□□□□ -0.17
Lig3-210ENSMUST00000173347 Cabp4Q8VHC5 271 aa13.99□□□□□ -0.17
Lig3-210ENSMUST00000173347 Trim26Q99PN3 545 aa13.99□□□□□ -0.17
Lig3-210ENSMUST00000173347 Mdc1Q5PSV9 1707 aa13.99□□□□□ -0.17
Lig3-210ENSMUST00000173347 Col14a1Q80X19 1797 aa13.98□□□□□ -0.17
Lig3-210ENSMUST00000173347 Slc4a3P16283 1227 aa13.98□□□□□ -0.17
Lig3-210ENSMUST00000173347 Pik3c2aQ61194 1686 aa13.98□□□□□ -0.17
Lig3-210ENSMUST00000173347 Eif4a2P10630 407 aa13.98□□□□□ -0.17
Lig3-210ENSMUST00000173347 Col16a1Q8BLX7 1580 aa13.98□□□□□ -0.17
Lig3-210ENSMUST00000173347 Supt16hQ920B9 1047 aa13.97□□□□□ -0.17
Lig3-210ENSMUST00000173347 Spef2Q8C9J3 1734 aa13.97□□□□□ -0.17
Lig3-210ENSMUST00000173347 Trim58Q5NCC9 485 aa13.97□□□□□ -0.17
Lig3-210ENSMUST00000173347 Thsd7aQ69ZU6 1645 aa13.97□□□□□ -0.17
Lig3-210ENSMUST00000173347 NalcnQ8BXR5 1738 aa13.97□□□□□ -0.17
Lig3-210ENSMUST00000173347 Stk31Q99MW1 1018 aa13.97□□□□□ -0.17
Lig3-210ENSMUST00000173347 Nrxn3Q6P9K9 1571 aa13.97□□□□□ -0.17
Lig3-210ENSMUST00000173347 Ankrd50F7BE84 1390 aa13.97□□□□□ -0.17
Lig3-210ENSMUST00000173347 Nlgn1Q99K10 843 aa13.96□□□□□ -0.17
Lig3-210ENSMUST00000173347 Ttc21aQ8C0S4 1314 aa13.96□□□□□ -0.17
Lig3-210ENSMUST00000173347 Ecm2Q5FW85 670 aa13.96□□□□□ -0.17
Lig3-210ENSMUST00000173347 Atp7bQ64446 1462 aa13.96□□□□□ -0.17
Lig3-210ENSMUST00000173347 Rbm25B2RY56 838 aaKnown RBP13.96□□□□□ -0.18
Lig3-210ENSMUST00000173347 Unc13bQ9Z1N9 1602 aa13.95□□□□□ -0.18
Lig3-210ENSMUST00000173347 Phlpp1Q8CHE4 1687 aa13.95□□□□□ -0.18
Lig3-210ENSMUST00000173347 Scaf1Q5U4C3 1256 aaKnown RBP13.95□□□□□ -0.18
Lig3-210ENSMUST00000173347 Tmem2Q5FWI3 1383 aa13.94□□□□□ -0.18
Lig3-210ENSMUST00000173347 MpripP97434 1024 aa13.94□□□□□ -0.18
Lig3-210ENSMUST00000173347 Mcm10Q0VBD2 885 aa13.94□□□□□ -0.18
Lig3-210ENSMUST00000173347 Plin1Q8CGN5 517 aa13.94□□□□□ -0.18
Lig3-210ENSMUST00000173347 Cabp2Q9JLK4 216 aa13.94□□□□□ -0.18
Lig3-210ENSMUST00000173347 Ubr1O70481 1757 aa13.94□□□□□ -0.18
Lig3-210ENSMUST00000173347 Pank1Q8K4K6 548 aa13.94□□□□□ -0.18
Lig3-210ENSMUST00000173347 FancaQ9JL70 1439 aa13.93□□□□□ -0.18
Lig3-210ENSMUST00000173347 CastP51125 788 aa13.93□□□□□ -0.18
Lig3-210ENSMUST00000173347 Rad17Q6NXW6 688 aa13.93□□□□□ -0.18
Lig3-210ENSMUST00000173347 Fyb1O35601 819 aa13.92□□□□□ -0.18
Lig3-210ENSMUST00000173347 Ccdc171E9Q1U1 1324 aa13.92□□□□□ -0.18
Lig3-210ENSMUST00000173347 Map2P20357 1828 aa13.92□□□□□ -0.18
Lig3-210ENSMUST00000173347 Gnai1B2RSH2 354 aa13.92□□□□□ -0.18
Lig3-210ENSMUST00000173347 Gnai3Q9DC51 354 aa13.92□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms