RNA–Protein interactions for RNA: ENSMUST00000116375.1

Cstf1-201, Transcript of Cleavage stimulation factor subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cstf1, Length 3,451 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1-201ENSMUST00000116375 PaskQ8CEE6 1383 aa13.53□□□□□ -0.24
Cstf1-201ENSMUST00000116375 Hecw2Q6I6G8 1578 aa13.53□□□□□ -0.24
Cstf1-201ENSMUST00000116375 Yeats2Q3TUF7 1407 aa13.53□□□□□ -0.24
Cstf1-201ENSMUST00000116375 Synj2Q9D2G5 1434 aa13.53□□□□□ -0.24
Cstf1-201ENSMUST00000116375 Eif2s2Q99L45 331 aaKnown RBP13.52□□□□□ -0.24
Cstf1-201ENSMUST00000116375 Cdk19Q8BWD8 501 aa13.52□□□□□ -0.25
Cstf1-201ENSMUST00000116375 Hs1bp3Q3TC93 395 aa13.52□□□□□ -0.25
Cstf1-201ENSMUST00000116375 Fchsd2Q3USJ8 740 aa13.52□□□□□ -0.25
Cstf1-201ENSMUST00000116375 Q9D9H8 365 aa13.52□□□□□ -0.25
Cstf1-201ENSMUST00000116375 Ccdc171E9Q1U1 1324 aa13.52□□□□□ -0.25
Cstf1-201ENSMUST00000116375 Rlbp1Q9Z275 317 aa13.51□□□□□ -0.25
Cstf1-201ENSMUST00000116375 Plekhg1F6S200 1446 aa13.51□□□□□ -0.25
Cstf1-201ENSMUST00000116375 Armcx1Q9CX83 456 aa13.5□□□□□ -0.25
Cstf1-201ENSMUST00000116375 Map7O88735 730 aa13.5□□□□□ -0.25
Cstf1-201ENSMUST00000116375 Ppp1r9bQ6R891 817 aaKnown RBP13.5□□□□□ -0.25
Cstf1-201ENSMUST00000116375 Htatsf1Q8BGC0 757 aa13.5□□□□□ -0.25
Cstf1-201ENSMUST00000116375 Znf541Q0GGX2 1363 aa13.5□□□□□ -0.25
Cstf1-201ENSMUST00000116375 NinlQ6ZQ12 1394 aa13.49□□□□□ -0.25
Cstf1-201ENSMUST00000116375 CastP51125 788 aa13.49□□□□□ -0.25
Cstf1-201ENSMUST00000116375 Swt1Q9DBQ9 907 aa13.49□□□□□ -0.25
Cstf1-201ENSMUST00000116375 Zranb1Q7M760 708 aa13.48□□□□□ -0.25
Cstf1-201ENSMUST00000116375 Ttc21aQ8C0S4 1314 aa13.48□□□□□ -0.25
Cstf1-201ENSMUST00000116375 Rbm25B2RY56 838 aaKnown RBP13.48□□□□□ -0.25
Cstf1-201ENSMUST00000116375 Ccdc60Q8C4J0 545 aa13.48□□□□□ -0.25
Cstf1-201ENSMUST00000116375 Uhrf1bp1B2KF50 1429 aa13.48□□□□□ -0.25
Cstf1-201ENSMUST00000116375 CltcQ68FD5 1675 aaKnown RBP13.47□□□□□ -0.25
Cstf1-201ENSMUST00000116375 KarsQ99MN1 595 aaKnown RBP13.47□□□□□ -0.25
Cstf1-201ENSMUST00000116375 Chmp4bQ9D8B3 224 aaKnown RBP13.47□□□□□ -0.25
Cstf1-201ENSMUST00000116375 Qser1A2BIE1 1698 aa13.47□□□□□ -0.25
Cstf1-201ENSMUST00000116375 Ankrd50F7BE84 1390 aa13.47□□□□□ -0.25
Cstf1-201ENSMUST00000116375 G3bp1P97855 465 aaKnown RBP13.46□□□□□ -0.25
Cstf1-201ENSMUST00000116375 Cul9Q80TT8 1865 aa13.46□□□□□ -0.25
Cstf1-201ENSMUST00000116375 PtprmP28828 1452 aa13.46□□□□□ -0.25
Cstf1-201ENSMUST00000116375 Afap1Q80YS6 731 aa13.46□□□□□ -0.26
Cstf1-201ENSMUST00000116375 Cep170bQ80U49 1574 aa13.46□□□□□ -0.26
Cstf1-201ENSMUST00000116375 Ppp1r18Q8BQ30 594 aa13.45□□□□□ -0.26
Cstf1-201ENSMUST00000116375 Rabep1O35551 862 aa13.45□□□□□ -0.26
Cstf1-201ENSMUST00000116375 Gtf3c3Q3TMP1 882 aa13.45□□□□□ -0.26
Cstf1-201ENSMUST00000116375 Phlpp2Q8BXA7 1320 aa13.44□□□□□ -0.26
Cstf1-201ENSMUST00000116375 Cluap1Q8R3P7 413 aa13.44□□□□□ -0.26
Cstf1-201ENSMUST00000116375 Naip7Q9JIB3 1402 aa13.44□□□□□ -0.26
Cstf1-201ENSMUST00000116375 Arhgef28P97433 1693 aa13.44□□□□□ -0.26
Cstf1-201ENSMUST00000116375 Slc12a5Q91V14 1138 aa13.44□□□□□ -0.26
Cstf1-201ENSMUST00000116375 Plcd4Q8K3R3 807 aa13.44□□□□□ -0.26
Cstf1-201ENSMUST00000116375 Ppp1r15aP17564 657 aa13.43□□□□□ -0.26
Cstf1-201ENSMUST00000116375 Irx3P81067 507 aa13.43□□□□□ -0.26
Cstf1-201ENSMUST00000116375 Trim28Q62318 834 aa13.43□□□□□ -0.26
Cstf1-201ENSMUST00000116375 PalmQ9Z0P4 383 aa13.43□□□□□ -0.26
Cstf1-201ENSMUST00000116375 Sptbn5F6UCX4 1208 aa13.43□□□□□ -0.26
Cstf1-201ENSMUST00000116375 Tbc1d32Q3URV1 1296 aa13.43□□□□□ -0.26
Cstf1-201ENSMUST00000116375 Gm6268A2A3U9 297 aa13.42□□□□□ -0.26
Cstf1-201ENSMUST00000116375 KnstrnQ9D9Z1 312 aaKnown RBP13.42□□□□□ -0.26
Cstf1-201ENSMUST00000116375 Maco1Q7TQE6 664 aaKnown RBP13.41□□□□□ -0.26
Cstf1-201ENSMUST00000116375 Birc3O08863 600 aa13.41□□□□□ -0.26
Cstf1-201ENSMUST00000116375 Gnai1B2RSH2 354 aa13.41□□□□□ -0.26
Cstf1-201ENSMUST00000116375 Gnai3Q9DC51 354 aa13.41□□□□□ -0.26
Cstf1-201ENSMUST00000116375 Pik3r4Q8VD65 1358 aa13.4□□□□□ -0.26
Cstf1-201ENSMUST00000116375 SkilQ60665 675 aa13.4□□□□□ -0.26
Cstf1-201ENSMUST00000116375 Usp32F8VPZ3 1604 aa13.4□□□□□ -0.26
Cstf1-201ENSMUST00000116375 Atp7bQ64446 1462 aa13.4□□□□□ -0.26
Cstf1-201ENSMUST00000116375 Znf330Q922H9 316 aa13.4□□□□□ -0.26
Cstf1-201ENSMUST00000116375 Map3k19E9Q3S4 1311 aa13.4□□□□□ -0.26
Cstf1-201ENSMUST00000116375 ArxO35085 564 aa13.4□□□□□ -0.26
Cstf1-201ENSMUST00000116375 Q4VA45 678 aa13.39□□□□□ -0.27
Cstf1-201ENSMUST00000116375 NktrP30415 1453 aa13.39□□□□□ -0.27
Cstf1-201ENSMUST00000116375 Abca14E9Q8F8 1683 aa13.39□□□□□ -0.27
Cstf1-201ENSMUST00000116375 Psme1P97371 249 aa13.38□□□□□ -0.27
Cstf1-201ENSMUST00000116375 Rangap1P46061 589 aaKnown RBP13.38□□□□□ -0.27
Cstf1-201ENSMUST00000116375 Tmco5bQ80X59 307 aa13.38□□□□□ -0.27
Cstf1-201ENSMUST00000116375 Aldh1l1Q8R0Y6 902 aa13.38□□□□□ -0.27
Cstf1-201ENSMUST00000116375 Cdc37l1Q9CZP7 335 aa13.38□□□□□ -0.27
Cstf1-201ENSMUST00000116375 NpatQ8BMA5 1420 aa13.38□□□□□ -0.27
Cstf1-201ENSMUST00000116375 Tnpo1Q8BFY9 898 aaKnown RBP13.38□□□□□ -0.27
Cstf1-201ENSMUST00000116375 Mfap1aC0HKD8 439 aaKnown RBP13.37□□□□□ -0.27
Cstf1-201ENSMUST00000116375 Mfap1bC0HKD9 439 aaKnown RBP13.37□□□□□ -0.27
Cstf1-201ENSMUST00000116375 Wwc1Q5SXA9 1104 aa13.37□□□□□ -0.27
Cstf1-201ENSMUST00000116375 Idi2Q8BFZ6 227 aa13.37□□□□□ -0.27
Cstf1-201ENSMUST00000116375 Ppp1r3fQ9JIG4 799 aa13.37□□□□□ -0.27
Cstf1-201ENSMUST00000116375 Pknox2Q8BG99 474 aa13.37□□□□□ -0.27
Cstf1-201ENSMUST00000116375 Hoxb7P09024 217 aa13.37□□□□□ -0.27
Cstf1-201ENSMUST00000116375 Plekhm2Q80TQ5 1018 aa13.37□□□□□ -0.27
Cstf1-201ENSMUST00000116375 Kif13aQ9EQW7 1749 aa13.36□□□□□ -0.27
Cstf1-201ENSMUST00000116375 Sos1Q62245 1319 aa13.36□□□□□ -0.27
Cstf1-201ENSMUST00000116375 Kif18aQ91WD7 886 aa13.36□□□□□ -0.27
Cstf1-201ENSMUST00000116375 Txndc2Q6P902 515 aa13.36□□□□□ -0.27
Cstf1-201ENSMUST00000116375 Cetn4Q8K4K1 168 aa13.36□□□□□ -0.27
Cstf1-201ENSMUST00000116375 MvpQ9EQK5 861 aa13.36□□□□□ -0.27
Cstf1-201ENSMUST00000116375 Itsn1Q9Z0R4 1714 aa13.35□□□□□ -0.27
Cstf1-201ENSMUST00000116375 AU019823E9PUQ3 292 aa13.35□□□□□ -0.27
Cstf1-201ENSMUST00000116375 Zc3h13E9Q784 1729 aaKnown RBP13.35□□□□□ -0.27
Cstf1-201ENSMUST00000116375 Zfp777B9EKF4 885 aa13.34□□□□□ -0.27
Cstf1-201ENSMUST00000116375 Pdlim2Q8R1G6 349 aa13.34□□□□□ -0.27
Cstf1-201ENSMUST00000116375 Dip2aQ8BWT5 1523 aa13.34□□□□□ -0.27
Cstf1-201ENSMUST00000116375 Vamp4O70480 141 aa13.33□□□□□ -0.27
Cstf1-201ENSMUST00000116375 Q3UPC7 1272 aa13.33□□□□□ -0.27
Cstf1-201ENSMUST00000116375 Cavin2Q63918 418 aaKnown RBP13.33□□□□□ -0.28
Cstf1-201ENSMUST00000116375 Znf316Q6PGE4 1016 aa13.33□□□□□ -0.28
Cstf1-201ENSMUST00000116375 HnrnpuQ8VEK3 800 aaKnown RBP13.33□□□□□ -0.28
Cstf1-201ENSMUST00000116375 PplQ9R269 1755 aa13.32□□□□□ -0.28
Cstf1-201ENSMUST00000116375 CatipB9EKE5 520 aa13.32□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 17.9 ms