RNA–Protein interactions for RNA: ENSMUST00000113054.8

Shroom3-202, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-202ENSMUST00000113054 Dusp9Q7TNL7 452 aa17.37■□□□□ 0.37
Shroom3-202ENSMUST00000113054 ApobrQ8VBT6 942 aa17.37■□□□□ 0.37
Shroom3-202ENSMUST00000113054 Golim4Q8BXA1 655 aa17.36■□□□□ 0.37
Shroom3-202ENSMUST00000113054 Pde4bB1AWC9 736 aa17.36■□□□□ 0.37
Shroom3-202ENSMUST00000113054 Prl7d1P04769 244 aa17.36■□□□□ 0.37
Shroom3-202ENSMUST00000113054 Lrrcc1Q69ZB0 1026 aa17.36■□□□□ 0.37
Shroom3-202ENSMUST00000113054 EappQ5BU09 281 aa17.36■□□□□ 0.37
Shroom3-202ENSMUST00000113054 Znf697Q569E7 569 aa17.35■□□□□ 0.37
Shroom3-202ENSMUST00000113054 Pnmal2G3X9N3 661 aa17.35■□□□□ 0.37
Shroom3-202ENSMUST00000113054 Ints3Q7TPD0 1041 aaKnown RBP17.35■□□□□ 0.37
Shroom3-202ENSMUST00000113054 Gnai2P08752 355 aaKnown RBP17.35■□□□□ 0.37
Shroom3-202ENSMUST00000113054 Cchcr1Q8K2I2 770 aa17.34■□□□□ 0.37
Shroom3-202ENSMUST00000113054 Hmgn5Q9JL35 406 aa17.34■□□□□ 0.37
Shroom3-202ENSMUST00000113054 Atad2bE9Q166 1460 aaKnown RBP17.34■□□□□ 0.37
Shroom3-202ENSMUST00000113054 Ppp2r1aQ76MZ3 589 aa17.34■□□□□ 0.37
Shroom3-202ENSMUST00000113054 Erc1Q99MI1 1120 aa17.33■□□□□ 0.37
Shroom3-202ENSMUST00000113054 Urb2E9Q7L1 1524 aaKnown RBP17.33■□□□□ 0.37
Shroom3-202ENSMUST00000113054 Rapgef4Q9EQZ6 1011 aa17.33■□□□□ 0.37
Shroom3-202ENSMUST00000113054 Nphp1Q9QY53 687 aa17.33■□□□□ 0.36
Shroom3-202ENSMUST00000113054 Kif20aP97329 887 aa17.33■□□□□ 0.36
Shroom3-202ENSMUST00000113054 Trim34bJ3QNR8 485 aa17.33■□□□□ 0.36
Shroom3-202ENSMUST00000113054 VeztQ3ZK22 780 aa17.33■□□□□ 0.36
Shroom3-202ENSMUST00000113054 Ubxn4Q8VCH8 506 aa17.33■□□□□ 0.36
Shroom3-202ENSMUST00000113054 Trim34aQ99PP6 485 aa17.33■□□□□ 0.36
Shroom3-202ENSMUST00000113054 Zkscan2G3X952 960 aa17.32■□□□□ 0.36
Shroom3-202ENSMUST00000113054 Smarca4Q3TKT4 1613 aaKnown RBP17.32■□□□□ 0.36
Shroom3-202ENSMUST00000113054 Cd109Q8R422 1442 aa17.32■□□□□ 0.36
Shroom3-202ENSMUST00000113054 Dhx8A2A4P0 1244 aaKnown RBP17.32■□□□□ 0.36
Shroom3-202ENSMUST00000113054 Zrsr2Q62377 462 aaKnown RBP17.32■□□□□ 0.36
Shroom3-202ENSMUST00000113054 Fbxo2Q80UW2 297 aa17.32■□□□□ 0.36
Shroom3-202ENSMUST00000113054 Btbd11Q6GQW0 1109 aa17.31■□□□□ 0.36
Shroom3-202ENSMUST00000113054 Ccdc178Q8CDV0 866 aa17.31■□□□□ 0.36
Shroom3-202ENSMUST00000113054 Prpf4bQ61136 1007 aaKnown RBP17.31■□□□□ 0.36
Shroom3-202ENSMUST00000113054 Stk38Q91VJ4 465 aa17.31■□□□□ 0.36
Shroom3-202ENSMUST00000113054 SelenooQ9DBC0 667 aa17.31■□□□□ 0.36
Shroom3-202ENSMUST00000113054 Ccdc183A2AJB1 534 aa17.31■□□□□ 0.36
Shroom3-202ENSMUST00000113054 Nup133Q8R0G9 1155 aa17.31■□□□□ 0.36
Shroom3-202ENSMUST00000113054 Plekhd1B2RPU2 505 aa17.3■□□□□ 0.36
Shroom3-202ENSMUST00000113054 Galntl5Q9D4M9 431 aa17.3■□□□□ 0.36
Shroom3-202ENSMUST00000113054 NgdnQ9DB96 315 aaKnown RBP17.3■□□□□ 0.36
Shroom3-202ENSMUST00000113054 SkilQ60665 675 aa17.3■□□□□ 0.36
Shroom3-202ENSMUST00000113054 Smc2Q8CG48 1191 aaKnown RBP17.3■□□□□ 0.36
Shroom3-202ENSMUST00000113054 NaspQ99MD9 773 aaKnown RBP17.3■□□□□ 0.36
Shroom3-202ENSMUST00000113054 Cfap69Q8BH53 942 aa17.3■□□□□ 0.36
Shroom3-202ENSMUST00000113054 Secisbp2lQ6A098 1086 aaKnown RBP17.3■□□□□ 0.36
Shroom3-202ENSMUST00000113054 Cetn4Q8K4K1 168 aa17.3■□□□□ 0.36
Shroom3-202ENSMUST00000113054 Spty2d1Q68FG3 682 aa17.29■□□□□ 0.36
Shroom3-202ENSMUST00000113054 Cavin4A2AMM0 362 aa17.29■□□□□ 0.36
Shroom3-202ENSMUST00000113054 Ankib1Q6ZPS6 1085 aa17.29■□□□□ 0.36
Shroom3-202ENSMUST00000113054 Jakmip1Q8BVL9 626 aa17.29■□□□□ 0.36
Shroom3-202ENSMUST00000113054 Ssr1Q9CY50 286 aaKnown RBP17.29■□□□□ 0.36
Shroom3-202ENSMUST00000113054 PalmQ9Z0P4 383 aa17.29■□□□□ 0.36
Shroom3-202ENSMUST00000113054 Srgap3Q812A2 1099 aa17.29■□□□□ 0.36
Shroom3-202ENSMUST00000113054 Kif3aP28741 701 aa17.29■□□□□ 0.36
Shroom3-202ENSMUST00000113054 Znf428Q8C1M2 176 aa17.29■□□□□ 0.36
Shroom3-202ENSMUST00000113054 Q9D9S1 216 aa17.28■□□□□ 0.36
Shroom3-202ENSMUST00000113054 Gtf3c3Q3TMP1 882 aa17.28■□□□□ 0.36
Shroom3-202ENSMUST00000113054 SfswapQ3USH5 945 aaKnown RBP17.28■□□□□ 0.36
Shroom3-202ENSMUST00000113054 Atl3Q91YH5 541 aa17.27■□□□□ 0.36
Shroom3-202ENSMUST00000113054 Gimap6Q8K349 305 aa17.27■□□□□ 0.36
Shroom3-202ENSMUST00000113054 Rrs1Q9CYH6 365 aaKnown RBP17.27■□□□□ 0.36
Shroom3-202ENSMUST00000113054 OptnQ8K3K8 584 aa17.27■□□□□ 0.35
Shroom3-202ENSMUST00000113054 Gprasp1Q5U4C1 1347 aa17.27■□□□□ 0.35
Shroom3-202ENSMUST00000113054 TkfcQ8VC30 578 aa17.25■□□□□ 0.35
Shroom3-202ENSMUST00000113054 PsapQ61207 557 aaKnown RBP17.25■□□□□ 0.35
Shroom3-202ENSMUST00000113054 Slc13a4Q8BZ82 625 aa17.25■□□□□ 0.35
Shroom3-202ENSMUST00000113054 Flad1Q8R123 492 aa17.25■□□□□ 0.35
Shroom3-202ENSMUST00000113054 Ccdc171E9Q1U1 1324 aa17.25■□□□□ 0.35
Shroom3-202ENSMUST00000113054 Ppp2r3aB2RXC8 1150 aa17.25■□□□□ 0.35
Shroom3-202ENSMUST00000113054 Tnpo1Q8BFY9 898 aaKnown RBP17.25■□□□□ 0.35
Shroom3-202ENSMUST00000113054 NefhP19246 1090 aa17.24■□□□□ 0.35
Shroom3-202ENSMUST00000113054 GnpatP98192 678 aa17.24■□□□□ 0.35
Shroom3-202ENSMUST00000113054 4930572O03RikQ8C5Y0 211 aa17.24■□□□□ 0.35
Shroom3-202ENSMUST00000113054 Fsd1Q7TPM6 496 aa17.24■□□□□ 0.35
Shroom3-202ENSMUST00000113054 Cnnm3Q32NY4 713 aa17.24■□□□□ 0.35
Shroom3-202ENSMUST00000113054 Prdm16A2A935 1275 aa17.24■□□□□ 0.35
Shroom3-202ENSMUST00000113054 Cux1P53564 1515 aa17.24■□□□□ 0.35
Shroom3-202ENSMUST00000113054 Arhgap31A6X8Z5 1425 aa17.24■□□□□ 0.35
Shroom3-202ENSMUST00000113054 Plekhh1Q80TI1 1356 aa17.23■□□□□ 0.35
Shroom3-202ENSMUST00000113054 Dusp27Q148W8 1138 aa17.23■□□□□ 0.35
Shroom3-202ENSMUST00000113054 Cdc37l1Q9CZP7 335 aa17.23■□□□□ 0.35
Shroom3-202ENSMUST00000113054 Kcnj4P52189 445 aa17.23■□□□□ 0.35
Shroom3-202ENSMUST00000113054 4933402E13RikQ9D4D2 429 aa17.23■□□□□ 0.35
Shroom3-202ENSMUST00000113054 Ltv1Q6NSQ7 470 aaKnown RBP17.23■□□□□ 0.35
Shroom3-202ENSMUST00000113054 Ttll13A4Q9F6 804 aa17.22■□□□□ 0.35
Shroom3-202ENSMUST00000113054 Hs1bp3Q3TC93 395 aa17.22■□□□□ 0.35
Shroom3-202ENSMUST00000113054 Cog6Q8R3I3 657 aa17.22■□□□□ 0.35
Shroom3-202ENSMUST00000113054 AnlnQ8K298 1121 aaKnown RBP17.22■□□□□ 0.35
Shroom3-202ENSMUST00000113054 Tnni2P13412 182 aa17.22■□□□□ 0.35
Shroom3-202ENSMUST00000113054 Ift140E9PY46 1464 aa17.22■□□□□ 0.35
Shroom3-202ENSMUST00000113054 Tango6Q8C3S2 1079 aa17.22■□□□□ 0.35
Shroom3-202ENSMUST00000113054 Nol7Q9D7Z3 254 aaKnown RBP17.21■□□□□ 0.35
Shroom3-202ENSMUST00000113054 Fkbp5Q64378 456 aa17.21■□□□□ 0.34
Shroom3-202ENSMUST00000113054 Wdhd1P59328 1117 aa17.2■□□□□ 0.34
Shroom3-202ENSMUST00000113054 Rai14Q9EP71 979 aaKnown RBP17.2■□□□□ 0.34
Shroom3-202ENSMUST00000113054 Cttnbp2B9EJA2 1648 aa17.2■□□□□ 0.34
Shroom3-202ENSMUST00000113054 CenphQ9QYM8 241 aa17.2■□□□□ 0.34
Shroom3-202ENSMUST00000113054 Fsd2Q8BZ52 692 aa17.2■□□□□ 0.34
Shroom3-202ENSMUST00000113054 Nlrp3Q8R4B8 1033 aa17.2■□□□□ 0.34
Shroom3-202ENSMUST00000113054 Podxl2Q8CAE9 603 aa17.2■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 37.2 ms