RNA–Protein interactions for RNA: ENSMUST00000111198.8

Cd44-208, Transcript of CD44 antigen, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cd44, Length 1,981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44-208ENSMUST00000111198 Mink1Q9JM52 1308 aa10.64□□□□□ -0.71
Cd44-208ENSMUST00000111198 Cpsf1Q9EPU4 1441 aaKnown RBP10.63□□□□□ -0.71
Cd44-208ENSMUST00000111198 Sox12Q04890 314 aa10.63□□□□□ -0.71
Cd44-208ENSMUST00000111198 NinlQ6ZQ12 1394 aa10.63□□□□□ -0.71
Cd44-208ENSMUST00000111198 Atp7bQ64446 1462 aa10.63□□□□□ -0.71
Cd44-208ENSMUST00000111198 Nphp4P59240 1425 aa10.62□□□□□ -0.71
Cd44-208ENSMUST00000111198 Fam135bQ9DAI6 1403 aa10.62□□□□□ -0.71
Cd44-208ENSMUST00000111198 Tnrc6bQ8BKI2 1810 aaKnown RBP10.62□□□□□ -0.71
Cd44-208ENSMUST00000111198 4930567H17RikQ3V0K5 233 aa10.61□□□□□ -0.71
Cd44-208ENSMUST00000111198 Emilin2Q8K482 1074 aa10.61□□□□□ -0.71
Cd44-208ENSMUST00000111198 Sirt1Q923E4 737 aa10.61□□□□□ -0.71
Cd44-208ENSMUST00000111198 Ap3b2Q9JME5 1082 aa10.61□□□□□ -0.71
Cd44-208ENSMUST00000111198 Gm16486A0A1D5RMD1 1434 aa10.61□□□□□ -0.71
Cd44-208ENSMUST00000111198 Atp10bB1AWN4 1474 aa10.6□□□□□ -0.71
Cd44-208ENSMUST00000111198 Tex14Q7M6U3 1450 aa10.6□□□□□ -0.71
Cd44-208ENSMUST00000111198 SafbD3YXK2 937 aaKnown RBP10.6□□□□□ -0.71
Cd44-208ENSMUST00000111198 Smim5Q8BT42 78 aa10.59□□□□□ -0.71
Cd44-208ENSMUST00000111198 NgefQ8CHT1 710 aa10.59□□□□□ -0.71
Cd44-208ENSMUST00000111198 Stard8Q8K031 1019 aa10.59□□□□□ -0.71
Cd44-208ENSMUST00000111198 Styxl1Q9DAR2 321 aa10.59□□□□□ -0.71
Cd44-208ENSMUST00000111198 Mug2P28666 1451 aa10.59□□□□□ -0.71
Cd44-208ENSMUST00000111198 Wdr17E9Q271 1322 aa10.59□□□□□ -0.71
Cd44-208ENSMUST00000111198 Mon2Q80TL7 1715 aa10.58□□□□□ -0.72
Cd44-208ENSMUST00000111198 Arhgef1Q61210 920 aaKnown RBP10.58□□□□□ -0.72
Cd44-208ENSMUST00000111198 Cadps2Q8BYR5 1297 aa10.58□□□□□ -0.72
Cd44-208ENSMUST00000111198 Gtf2e1Q9D0D5 440 aa10.58□□□□□ -0.72
Cd44-208ENSMUST00000111198 Znf710Q3U288 666 aa10.57□□□□□ -0.72
Cd44-208ENSMUST00000111198 Nrxn1Q9CS84 1514 aa10.57□□□□□ -0.72
Cd44-208ENSMUST00000111198 Abca15E9PWH4 1668 aa10.57□□□□□ -0.72
Cd44-208ENSMUST00000111198 NktrP30415 1453 aa10.57□□□□□ -0.72
Cd44-208ENSMUST00000111198 Cdk19Q8BWD8 501 aa10.57□□□□□ -0.72
Cd44-208ENSMUST00000111198 Lrrc59Q922Q8 307 aaKnown RBP10.57□□□□□ -0.72
Cd44-208ENSMUST00000111198 Ddx54Q8K4L0 874 aaKnown RBP10.56□□□□□ -0.72
Cd44-208ENSMUST00000111198 PtpruB1AUH1 1446 aa10.56□□□□□ -0.72
Cd44-208ENSMUST00000111198 Znf316Q6PGE4 1016 aa10.56□□□□□ -0.72
Cd44-208ENSMUST00000111198 Acsbg1Q99PU5 721 aa10.56□□□□□ -0.72
Cd44-208ENSMUST00000111198 CenpjQ569L8 1344 aa10.55□□□□□ -0.72
Cd44-208ENSMUST00000111198 Plcd4Q8K3R3 807 aa10.55□□□□□ -0.72
Cd44-208ENSMUST00000111198 Zbtb38Q3LR78 1197 aa10.54□□□□□ -0.72
Cd44-208ENSMUST00000111198 Srcin1Q9QWI6 1250 aa10.54□□□□□ -0.72
Cd44-208ENSMUST00000111198 Zranb1Q7M760 708 aa10.54□□□□□ -0.72
Cd44-208ENSMUST00000111198 Fyb1O35601 819 aa10.53□□□□□ -0.72
Cd44-208ENSMUST00000111198 Dixdc1Q80Y83 711 aa10.53□□□□□ -0.72
Cd44-208ENSMUST00000111198 InhbeO08717 350 aa10.52□□□□□ -0.72
Cd44-208ENSMUST00000111198 Slc35g1Q8BY79 368 aa10.52□□□□□ -0.72
Cd44-208ENSMUST00000111198 Gsto1O09131 240 aa10.52□□□□□ -0.73
Cd44-208ENSMUST00000111198 Calr4Q3TQS0 420 aa10.52□□□□□ -0.73
Cd44-208ENSMUST00000111198 Zmym3Q9JLM4 1370 aa10.5□□□□□ -0.73
Cd44-208ENSMUST00000111198 Col16a1Q8BLX7 1580 aa10.5□□□□□ -0.73
Cd44-208ENSMUST00000111198 Zbtb4Q5F293 982 aa10.5□□□□□ -0.73
Cd44-208ENSMUST00000111198 Eno4Q8C042 619 aa10.5□□□□□ -0.73
Cd44-208ENSMUST00000111198 Cdhr2E9Q7P9 1308 aa10.49□□□□□ -0.73
Cd44-208ENSMUST00000111198 FanciQ8K368 1330 aa10.49□□□□□ -0.73
Cd44-208ENSMUST00000111198 Rundc1Q0VDN7 615 aa10.49□□□□□ -0.73
Cd44-208ENSMUST00000111198 Idi2Q8BFZ6 227 aa10.49□□□□□ -0.73
Cd44-208ENSMUST00000111198 Sbno1Q689Z5 1390 aa10.49□□□□□ -0.73
Cd44-208ENSMUST00000111198 Nfat5Q9WV30 1534 aa10.49□□□□□ -0.73
Cd44-208ENSMUST00000111198 Bcl9lQ67FY2 1494 aa10.49□□□□□ -0.73
Cd44-208ENSMUST00000111198 Col22a1E9Q7P1 1613 aa10.49□□□□□ -0.73
Cd44-208ENSMUST00000111198 ZgpatQ8VDM1 511 aa10.48□□□□□ -0.73
Cd44-208ENSMUST00000111198 TimelessQ9R1X4 1197 aa10.48□□□□□ -0.73
Cd44-208ENSMUST00000111198 Pola1P33609 1465 aa10.48□□□□□ -0.73
Cd44-208ENSMUST00000111198 MpndQ3TV65 487 aa10.48□□□□□ -0.73
Cd44-208ENSMUST00000111198 Card11Q8CIS0 1159 aa10.48□□□□□ -0.73
Cd44-208ENSMUST00000111198 Exosc9Q9JHI7 438 aaKnown RBP10.48□□□□□ -0.73
Cd44-208ENSMUST00000111198 Tnrc6cQ3UHC0 1690 aaKnown RBP10.48□□□□□ -0.73
Cd44-208ENSMUST00000111198 Tet3Q8BG87 1668 aa10.48□□□□□ -0.73
Cd44-208ENSMUST00000111198 Rock2P70336 1388 aa10.48□□□□□ -0.73
Cd44-208ENSMUST00000111198 HdgfP51859 237 aaKnown RBP10.47□□□□□ -0.73
Cd44-208ENSMUST00000111198 Mkrn3Q60764 544 aa10.47□□□□□ -0.73
Cd44-208ENSMUST00000111198 PaskQ8CEE6 1383 aa10.47□□□□□ -0.73
Cd44-208ENSMUST00000111198 Tmem132aQ922P8 1018 aa10.46□□□□□ -0.73
Cd44-208ENSMUST00000111198 Psrc1Q9D0P7 329 aa10.46□□□□□ -0.73
Cd44-208ENSMUST00000111198 InsrP15208 1372 aa10.46□□□□□ -0.73
Cd44-208ENSMUST00000111198 Shank2Q80Z38 1476 aa10.46□□□□□ -0.73
Cd44-208ENSMUST00000111198 Map3k19E9Q3S4 1311 aa10.46□□□□□ -0.73
Cd44-208ENSMUST00000111198 Rad21Q61550 635 aaKnown RBP10.46□□□□□ -0.74
Cd44-208ENSMUST00000111198 Dzip1Q8BMD2 852 aa10.45□□□□□ -0.74
Cd44-208ENSMUST00000111198 Txnrd1Q9JMH6 613 aa10.45□□□□□ -0.74
Cd44-208ENSMUST00000111198 Znf335A2A5K6 1337 aa10.45□□□□□ -0.74
Cd44-208ENSMUST00000111198 Frmpd2A0A140LI67 1392 aa10.45□□□□□ -0.74
Cd44-208ENSMUST00000111198 Gimap6Q8K349 305 aa10.45□□□□□ -0.74
Cd44-208ENSMUST00000111198 Rgs17Q9QZB0 210 aa10.45□□□□□ -0.74
Cd44-208ENSMUST00000111198 Nid2O88322 1403 aa10.44□□□□□ -0.74
Cd44-208ENSMUST00000111198 Smg6P61406 1418 aaKnown RBP10.44□□□□□ -0.74
Cd44-208ENSMUST00000111198 Ncapd2Q8K2Z4 1392 aa10.43□□□□□ -0.74
Cd44-208ENSMUST00000111198 Ubap1lG3UW59 384 aa10.43□□□□□ -0.74
Cd44-208ENSMUST00000111198 Sf3b2Q3UJB0 878 aaKnown RBP10.43□□□□□ -0.74
Cd44-208ENSMUST00000111198 Ppp4r2Q0VGB7 417 aa10.43□□□□□ -0.74
Cd44-208ENSMUST00000111198 Sgsm1Q8BPQ7 1093 aa10.43□□□□□ -0.74
Cd44-208ENSMUST00000111198 Cacna1sQ02789 1880 aa10.42□□□□□ -0.74
Cd44-208ENSMUST00000111198 Ltbp1Q8CG19 1712 aa10.42□□□□□ -0.74
Cd44-208ENSMUST00000111198 Tnks1bp1P58871 1720 aa10.42□□□□□ -0.74
Cd44-208ENSMUST00000111198 Ncoa4Q5U4H9 625 aa10.41□□□□□ -0.74
Cd44-208ENSMUST00000111198 Gm21698A0A087WQP8 267 aa10.39□□□□□ -0.75
Cd44-208ENSMUST00000111198 Nolc1E9Q5C9 702 aaKnown RBP10.39□□□□□ -0.75
Cd44-208ENSMUST00000111198 Gm21671G3UY31 267 aa10.39□□□□□ -0.75
Cd44-208ENSMUST00000111198 Cnga1P29974 684 aa10.39□□□□□ -0.75
Cd44-208ENSMUST00000111198 Pard3Q99NH2 1333 aa10.39□□□□□ -0.75
Cd44-208ENSMUST00000111198 Ccdc129Q14B48 1034 aa10.39□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 21.1 ms