RNA–Protein interactions for RNA: ENSMUST00000111198.8

Cd44-208, Transcript of CD44 antigen, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cd44, Length 1,981 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44-208ENSMUST00000111198 Gm35339A0A140LHH9 1649 aa17.18■□□□□ 0.34
Cd44-208ENSMUST00000111198 NischQ80TM9 1593 aa16.89■□□□□ 0.29
Cd44-208ENSMUST00000111198 Abcc8B2RUS7 1588 aa16.35■□□□□ 0.21
Cd44-208ENSMUST00000111198 Abcc9P70170 1546 aa16.34■□□□□ 0.21
Cd44-208ENSMUST00000111198 ScribQ80U72 1612 aa15.83■□□□□ 0.13
Cd44-208ENSMUST00000111198 NacadQ5SWP3 1504 aa15.31■□□□□ 0.04
Cd44-208ENSMUST00000111198 Kdm5dQ62240 1548 aa15.28■□□□□ 0.04
Cd44-208ENSMUST00000111198 Dcaf1Q80TR8 1506 aa15.03■□□□□ -0
Cd44-208ENSMUST00000111198 Sycp2Q9CUU3 1500 aa15.02□□□□□ -0.01
Cd44-208ENSMUST00000111198 BicraF8VPZ9 1578 aa14.83□□□□□ -0.04
Cd44-208ENSMUST00000111198 Rb1cc1Q9ESK9 1588 aa14.72□□□□□ -0.05
Cd44-208ENSMUST00000111198 Ccdc180J3QNE4 1664 aa14.52□□□□□ -0.09
Cd44-208ENSMUST00000111198 Dnajc5bQ9CQ94 199 aa14.51□□□□□ -0.09
Cd44-208ENSMUST00000111198 Baz1aO88379 1555 aa14.5□□□□□ -0.09
Cd44-208ENSMUST00000111198 Crybg2B7ZCC2 1516 aa14.47□□□□□ -0.09
Cd44-208ENSMUST00000111198 Rhox8Q6VSS7 320 aa14.45□□□□□ -0.1
Cd44-208ENSMUST00000111198 Pds5bQ4VA53 1446 aaKnown RBP14.42□□□□□ -0.1
Cd44-208ENSMUST00000111198 Thoc2B1AZI6 1594 aaKnown RBP14.36□□□□□ -0.11
Cd44-208ENSMUST00000111198 Zcchc6Q5BLK4 1491 aaKnown RBP14.28□□□□□ -0.12
Cd44-208ENSMUST00000111198 Atad2bE9Q166 1460 aaKnown RBP14.27□□□□□ -0.12
Cd44-208ENSMUST00000111198 Ube2uB1AUC4 352 aa14.23□□□□□ -0.13
Cd44-208ENSMUST00000111198 Smarca4Q3TKT4 1613 aaKnown RBP14.13□□□□□ -0.15
Cd44-208ENSMUST00000111198 Ercc6F8VPZ5 1481 aa14.12□□□□□ -0.15
Cd44-208ENSMUST00000111198 Cc2d2aQ8CFW7 1633 aa14.12□□□□□ -0.15
Cd44-208ENSMUST00000111198 Smarca2Q6DIC0 1577 aa14.11□□□□□ -0.15
Cd44-208ENSMUST00000111198 Iqgap2Q3UQ44 1575 aa14.07□□□□□ -0.16
Cd44-208ENSMUST00000111198 Cecr2E9Q2Z1 1453 aa14.03□□□□□ -0.16
Cd44-208ENSMUST00000111198 Fam135aQ6NS59 1506 aa14.01□□□□□ -0.17
Cd44-208ENSMUST00000111198 Wdr62Q3U3T8 1523 aa13.96□□□□□ -0.18
Cd44-208ENSMUST00000111198 Frmpd1A2AKB4 1549 aa13.93□□□□□ -0.18
Cd44-208ENSMUST00000111198 Baz1bQ9Z277 1479 aa13.87□□□□□ -0.19
Cd44-208ENSMUST00000111198 Phldb1Q6PDH0 1371 aaKnown RBP13.87□□□□□ -0.19
Cd44-208ENSMUST00000111198 Rtl1Q7M732 1744 aa13.8□□□□□ -0.2
Cd44-208ENSMUST00000111198 Unc13aQ4KUS2 1712 aa13.77□□□□□ -0.21
Cd44-208ENSMUST00000111198 Cttnbp2B9EJA2 1648 aa13.73□□□□□ -0.21
Cd44-208ENSMUST00000111198 Ubl4bQ9CQ84 188 aa13.72□□□□□ -0.21
Cd44-208ENSMUST00000111198 CftrP26361 1476 aa13.72□□□□□ -0.21
Cd44-208ENSMUST00000111198 Synj1Q8CHC4 1574 aa13.68□□□□□ -0.22
Cd44-208ENSMUST00000111198 Mrc2Q64449 1479 aa13.67□□□□□ -0.22
Cd44-208ENSMUST00000111198 Brd4Q9ESU6 1400 aaKnown RBP13.65□□□□□ -0.22
Cd44-208ENSMUST00000111198 Ccdc136Q3TVA9 1136 aa13.54□□□□□ -0.24
Cd44-208ENSMUST00000111198 Esf1Q3V1V3 845 aaKnown RBP13.43□□□□□ -0.26
Cd44-208ENSMUST00000111198 Rsf1E9PWW9 1441 aaKnown RBP13.42□□□□□ -0.26
Cd44-208ENSMUST00000111198 Cux2P70298 1426 aa13.41□□□□□ -0.26
Cd44-208ENSMUST00000111198 Lrriq1Q0P5X1 1673 aa13.4□□□□□ -0.27
Cd44-208ENSMUST00000111198 Kif15Q6P9L6 1387 aa13.39□□□□□ -0.27
Cd44-208ENSMUST00000111198 Trim41Q5NCC3 630 aa13.35□□□□□ -0.27
Cd44-208ENSMUST00000111198 Lamc3Q9R0B6 1581 aa13.35□□□□□ -0.27
Cd44-208ENSMUST00000111198 Kif21aQ9QXL2 1672 aa13.35□□□□□ -0.27
Cd44-208ENSMUST00000111198 Chic1Q8CBW7 227 aa13.34□□□□□ -0.27
Cd44-208ENSMUST00000111198 Npm1Q61937 292 aaKnown RBP13.25□□□□□ -0.29
Cd44-208ENSMUST00000111198 Dnajc5P60904 198 aa13.24□□□□□ -0.29
Cd44-208ENSMUST00000111198 Cep164Q5DU05 1446 aa13.22□□□□□ -0.29
Cd44-208ENSMUST00000111198 Eif4g3Q80XI3 1579 aaKnown RBP13.21□□□□□ -0.3
Cd44-208ENSMUST00000111198 TnnQ80Z71 1560 aa13.18□□□□□ -0.3
Cd44-208ENSMUST00000111198 Mapk8ip2Q9ERE9 830 aa13.17□□□□□ -0.3
Cd44-208ENSMUST00000111198 Top2bQ64511 1612 aa13.16□□□□□ -0.3
Cd44-208ENSMUST00000111198 Ccdc18Q640L5 1455 aa13.15□□□□□ -0.3
Cd44-208ENSMUST00000111198 Golga3P55937 1487 aa13.14□□□□□ -0.31
Cd44-208ENSMUST00000111198 Dhx29Q6PGC1 1365 aaKnown RBP13.12□□□□□ -0.31
Cd44-208ENSMUST00000111198 Urb2E9Q7L1 1524 aaKnown RBP13.12□□□□□ -0.31
Cd44-208ENSMUST00000111198 Camsap1A2AHC3 1581 aa13.1□□□□□ -0.31
Cd44-208ENSMUST00000111198 Shroom2A2ALU4 1481 aa13.09□□□□□ -0.31
Cd44-208ENSMUST00000111198 Plb1Q3TTY0 1478 aa13.09□□□□□ -0.31
Cd44-208ENSMUST00000111198 Il27Q8K3I6 234 aa13.09□□□□□ -0.31
Cd44-208ENSMUST00000111198 LrpprcQ6PB66 1392 aaKnown RBP13.08□□□□□ -0.32
Cd44-208ENSMUST00000111198 Kcna4Q61423 654 aa13.08□□□□□ -0.32
Cd44-208ENSMUST00000111198 Crocc2F6XLV1 1638 aa13.08□□□□□ -0.32
Cd44-208ENSMUST00000111198 Cngb1E1AZ71 1325 aa13.05□□□□□ -0.32
Cd44-208ENSMUST00000111198 Fmn1Q05860 1466 aa13.02□□□□□ -0.33
Cd44-208ENSMUST00000111198 PogzQ8BZH4 1409 aaKnown RBP13□□□□□ -0.33
Cd44-208ENSMUST00000111198 Ehmt2Q9Z148 1263 aaKnown RBP13□□□□□ -0.33
Cd44-208ENSMUST00000111198 Ift140E9PY46 1464 aa12.99□□□□□ -0.33
Cd44-208ENSMUST00000111198 Plppr3Q7TPB0 716 aa12.97□□□□□ -0.33
Cd44-208ENSMUST00000111198 Rusc2Q80U22 1514 aa12.96□□□□□ -0.33
Cd44-208ENSMUST00000111198 Duox2A2AQ99 1517 aa12.94□□□□□ -0.34
Cd44-208ENSMUST00000111198 Col17a1Q07563 1470 aa12.91□□□□□ -0.34
Cd44-208ENSMUST00000111198 Pabpn1Q8CCS6 302 aaKnown RBP12.91□□□□□ -0.34
Cd44-208ENSMUST00000111198 Grin2bQ01097 1482 aa12.9□□□□□ -0.34
Cd44-208ENSMUST00000111198 Rpgrip1Q9EPQ2 1331 aa12.89□□□□□ -0.35
Cd44-208ENSMUST00000111198 Disp1Q3TDN0 1521 aa12.87□□□□□ -0.35
Cd44-208ENSMUST00000111198 Pbrm1Q8BSQ9 1634 aaKnown RBP12.86□□□□□ -0.35
Cd44-208ENSMUST00000111198 Samd9lQ69Z37 1561 aa12.85□□□□□ -0.35
Cd44-208ENSMUST00000111198 Setd1bQ8CFT2 1985 aa12.84□□□□□ -0.35
Cd44-208ENSMUST00000111198 Ppargc1bQ8VHJ7 1014 aa12.83□□□□□ -0.35
Cd44-208ENSMUST00000111198 Efcab5A0JP43 1406 aa12.82□□□□□ -0.36
Cd44-208ENSMUST00000111198 Nup160Q9Z0W3 1402 aaKnown RBP12.82□□□□□ -0.36
Cd44-208ENSMUST00000111198 Pelp1Q9DBD5 1123 aaKnown RBP12.81□□□□□ -0.36
Cd44-208ENSMUST00000111198 Cc2d2bA0A286YDU8 1405 aa12.81□□□□□ -0.36
Cd44-208ENSMUST00000111198 Zcchc11B2RX14 1644 aaKnown RBP12.79□□□□□ -0.36
Cd44-208ENSMUST00000111198 Top2aQ01320 1528 aaKnown RBP12.75□□□□□ -0.37
Cd44-208ENSMUST00000111198 Ccdc88bQ4QRL3 1481 aa12.75□□□□□ -0.37
Cd44-208ENSMUST00000111198 Grin2aP35436 1464 aa12.74□□□□□ -0.37
Cd44-208ENSMUST00000111198 Rad54l2Q99NG0 1466 aa12.74□□□□□ -0.37
Cd44-208ENSMUST00000111198 NrkQ9R0G8 1455 aa12.73□□□□□ -0.37
Cd44-208ENSMUST00000111198 Magi3Q9EQJ9 1476 aa12.73□□□□□ -0.37
Cd44-208ENSMUST00000111198 AqrQ8CFQ3 1481 aaKnown RBP12.72□□□□□ -0.37
Cd44-208ENSMUST00000111198 Fgd6Q69ZL1 1399 aa12.68□□□□□ -0.38
Cd44-208ENSMUST00000111198 Gpatch8A2A6A1 1505 aa12.67□□□□□ -0.38
Cd44-208ENSMUST00000111198 Shroom4Q1W617 1475 aa12.67□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 8.1 ms