RNA–Protein interactions for RNA: ENSMUST00000111047.8

Bdnf-207, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,042 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-207ENSMUST00000111047 Scaf11E9PZM7 1456 aaKnown RBP9.39□□□□□ -0.91
Bdnf-207ENSMUST00000111047 SkilQ60665 675 aa9.39□□□□□ -0.91
Bdnf-207ENSMUST00000111047 Fam135bQ9DAI6 1403 aa9.39□□□□□ -0.91
Bdnf-207ENSMUST00000111047 Clasp1Q80TV8 1535 aaKnown RBP9.38□□□□□ -0.91
Bdnf-207ENSMUST00000111047 Gnai1B2RSH2 354 aa9.38□□□□□ -0.91
Bdnf-207ENSMUST00000111047 Maco1Q7TQE6 664 aaKnown RBP9.38□□□□□ -0.91
Bdnf-207ENSMUST00000111047 Gnai3Q9DC51 354 aa9.38□□□□□ -0.91
Bdnf-207ENSMUST00000111047 Cep152A2AUM9 1736 aaKnown RBP9.38□□□□□ -0.91
Bdnf-207ENSMUST00000111047 Itsn2Q9Z0R6 1659 aa9.38□□□□□ -0.91
Bdnf-207ENSMUST00000111047 Safb2Q80YR5 991 aaKnown RBP9.38□□□□□ -0.91
Bdnf-207ENSMUST00000111047 GorabQ8BRM2 368 aa9.38□□□□□ -0.91
Bdnf-207ENSMUST00000111047 PalmQ9Z0P4 383 aa9.38□□□□□ -0.91
Bdnf-207ENSMUST00000111047 Rlbp1Q9Z275 317 aa9.38□□□□□ -0.91
Bdnf-207ENSMUST00000111047 AU022751B1B0V2 589 aa9.38□□□□□ -0.91
Bdnf-207ENSMUST00000111047 Afap1Q80YS6 731 aa9.38□□□□□ -0.91
Bdnf-207ENSMUST00000111047 Rrp9Q91WM3 475 aaKnown RBP9.38□□□□□ -0.91
Bdnf-207ENSMUST00000111047 Talpid3E9PV87 1520 aa9.38□□□□□ -0.91
Bdnf-207ENSMUST00000111047 Fchsd2Q3USJ8 740 aa9.37□□□□□ -0.91
Bdnf-207ENSMUST00000111047 Rims1Q99NE5 1463 aa9.37□□□□□ -0.91
Bdnf-207ENSMUST00000111047 CastP51125 788 aa9.37□□□□□ -0.91
Bdnf-207ENSMUST00000111047 Ptch1Q61115 1434 aa9.37□□□□□ -0.91
Bdnf-207ENSMUST00000111047 Zfyve16Q80U44 1528 aa9.37□□□□□ -0.91
Bdnf-207ENSMUST00000111047 Vsig10D3YX43 558 aa9.37□□□□□ -0.91
Bdnf-207ENSMUST00000111047 Stk31Q99MW1 1018 aa9.37□□□□□ -0.91
Bdnf-207ENSMUST00000111047 Kif18aQ91WD7 886 aa9.36□□□□□ -0.91
Bdnf-207ENSMUST00000111047 Kidins220E9Q9B7 1793 aa9.36□□□□□ -0.91
Bdnf-207ENSMUST00000111047 Slc12a5Q91V14 1138 aa9.36□□□□□ -0.91
Bdnf-207ENSMUST00000111047 Hs1bp3Q3TC93 395 aa9.36□□□□□ -0.91
Bdnf-207ENSMUST00000111047 Usp16Q99LG0 825 aa9.36□□□□□ -0.91
Bdnf-207ENSMUST00000111047 Uggt1Q6P5E4 1551 aa9.36□□□□□ -0.91
Bdnf-207ENSMUST00000111047 Myom2Q14BI5 1463 aa9.35□□□□□ -0.91
Bdnf-207ENSMUST00000111047 Abca6Q8K441 1624 aa9.35□□□□□ -0.91
Bdnf-207ENSMUST00000111047 AU015836B2RUM3 263 aa9.35□□□□□ -0.91
Bdnf-207ENSMUST00000111047 Ccdc146E9Q9F7 977 aa9.35□□□□□ -0.91
Bdnf-207ENSMUST00000111047 Cgnl1Q6AW69 1298 aa9.35□□□□□ -0.91
Bdnf-207ENSMUST00000111047 Cetn4Q8K4K1 168 aa9.35□□□□□ -0.91
Bdnf-207ENSMUST00000111047 NinlQ6ZQ12 1394 aa9.35□□□□□ -0.91
Bdnf-207ENSMUST00000111047 Phlpp2Q8BXA7 1320 aa9.35□□□□□ -0.91
Bdnf-207ENSMUST00000111047 Cog6Q8R3I3 657 aa9.35□□□□□ -0.91
Bdnf-207ENSMUST00000111047 Cdc37l1Q9CZP7 335 aa9.35□□□□□ -0.91
Bdnf-207ENSMUST00000111047 Chd1P40201 1711 aa9.35□□□□□ -0.91
Bdnf-207ENSMUST00000111047 Eif4g2Q62448 906 aaKnown RBP9.34□□□□□ -0.91
Bdnf-207ENSMUST00000111047 P2rx7Q9Z1M0 595 aa9.34□□□□□ -0.91
Bdnf-207ENSMUST00000111047 PtprtQ99M80 1454 aa9.34□□□□□ -0.91
Bdnf-207ENSMUST00000111047 Rtf1A2AQ19 715 aaKnown RBP9.34□□□□□ -0.91
Bdnf-207ENSMUST00000111047 Trim44Q9QXA7 346 aa9.34□□□□□ -0.91
Bdnf-207ENSMUST00000111047 Tubgcp6G5E8P0 1769 aa9.34□□□□□ -0.91
Bdnf-207ENSMUST00000111047 Pibf1E9Q6K3 756 aa9.34□□□□□ -0.92
Bdnf-207ENSMUST00000111047 Rfx1P48377 963 aa9.34□□□□□ -0.92
Bdnf-207ENSMUST00000111047 PaskQ8CEE6 1383 aa9.33□□□□□ -0.92
Bdnf-207ENSMUST00000111047 Tbc1d32Q3URV1 1296 aa9.33□□□□□ -0.92
Bdnf-207ENSMUST00000111047 Ncbp3Q8BZR9 615 aaKnown RBP9.33□□□□□ -0.92
Bdnf-207ENSMUST00000111047 Efcab6Q6P1E8 1516 aa9.33□□□□□ -0.92
Bdnf-207ENSMUST00000111047 Prrc2bQ7TPM1 1486 aaKnown RBP9.33□□□□□ -0.92
Bdnf-207ENSMUST00000111047 Rsph3aQ3UFY4 516 aa9.33□□□□□ -0.92
Bdnf-207ENSMUST00000111047 Plekhm2Q80TQ5 1018 aa9.33□□□□□ -0.92
Bdnf-207ENSMUST00000111047 Ric3Q8BPM6 367 aa9.33□□□□□ -0.92
Bdnf-207ENSMUST00000111047 4933402E13RikQ9D4D2 429 aa9.33□□□□□ -0.92
Bdnf-207ENSMUST00000111047 Iqgap3F8VQ29 1632 aa9.33□□□□□ -0.92
Bdnf-207ENSMUST00000111047 Plxnc1Q9QZC2 1574 aa9.33□□□□□ -0.92
Bdnf-207ENSMUST00000111047 Aldh1l1Q8R0Y6 902 aa9.33□□□□□ -0.92
Bdnf-207ENSMUST00000111047 Gm156Q58A37 223 aa9.32□□□□□ -0.92
Bdnf-207ENSMUST00000111047 Xrn1P97789 1719 aaKnown RBP9.32□□□□□ -0.92
Bdnf-207ENSMUST00000111047 Ankrd50F7BE84 1390 aa9.32□□□□□ -0.92
Bdnf-207ENSMUST00000111047 Triml2E9PW10 424 aa9.32□□□□□ -0.92
Bdnf-207ENSMUST00000111047 Ppp1r15aP17564 657 aa9.32□□□□□ -0.92
Bdnf-207ENSMUST00000111047 MvpQ9EQK5 861 aa9.32□□□□□ -0.92
Bdnf-207ENSMUST00000111047 Cabp2Q9JLK4 216 aa9.32□□□□□ -0.92
Bdnf-207ENSMUST00000111047 Adgrb3Q80ZF8 1522 aa9.31□□□□□ -0.92
Bdnf-207ENSMUST00000111047 Eif2ak4Q9QZ05 1648 aa9.31□□□□□ -0.92
Bdnf-207ENSMUST00000111047 KdrP35918 1367 aa9.31□□□□□ -0.92
Bdnf-207ENSMUST00000111047 Q3UPC7 1272 aa9.31□□□□□ -0.92
Bdnf-207ENSMUST00000111047 Irx6Q9ER75 438 aa9.31□□□□□ -0.92
Bdnf-207ENSMUST00000111047 Nek4Q9Z1J2 792 aa9.31□□□□□ -0.92
Bdnf-207ENSMUST00000111047 Znf521Q6KAS7 1311 aa9.31□□□□□ -0.92
Bdnf-207ENSMUST00000111047 Abca17E9PX95 1733 aa9.31□□□□□ -0.92
Bdnf-207ENSMUST00000111047 Ppp1r3fQ9JIG4 799 aa9.31□□□□□ -0.92
Bdnf-207ENSMUST00000111047 Myo5cE9Q1F5 1742 aa9.3□□□□□ -0.92
Bdnf-207ENSMUST00000111047 Hfm1D3Z4R1 1434 aa9.3□□□□□ -0.92
Bdnf-207ENSMUST00000111047 Wwc1Q5SXA9 1104 aa9.3□□□□□ -0.92
Bdnf-207ENSMUST00000111047 AU019823E9PUQ3 292 aa9.3□□□□□ -0.92
Bdnf-207ENSMUST00000111047 Sox12Q04890 314 aa9.3□□□□□ -0.92
Bdnf-207ENSMUST00000111047 Ttc21aQ8C0S4 1314 aa9.3□□□□□ -0.92
Bdnf-207ENSMUST00000111047 Depdc5P61460 1591 aa9.3□□□□□ -0.92
Bdnf-207ENSMUST00000111047 Q3TQI7 289 aaKnown RBP9.29□□□□□ -0.92
Bdnf-207ENSMUST00000111047 Kcna4Q61423 654 aa9.29□□□□□ -0.92
Bdnf-207ENSMUST00000111047 Atp10aO54827 1508 aa9.29□□□□□ -0.92
Bdnf-207ENSMUST00000111047 Hsp90b1P08113 802 aaKnown RBP9.28□□□□□ -0.92
Bdnf-207ENSMUST00000111047 MpripP97434 1024 aa9.28□□□□□ -0.92
Bdnf-207ENSMUST00000111047 Sos1Q62245 1319 aa9.28□□□□□ -0.92
Bdnf-207ENSMUST00000111047 PtmaP26350 111 aa9.28□□□□□ -0.92
Bdnf-207ENSMUST00000111047 CarsQ9ER72 831 aaKnown RBP9.28□□□□□ -0.92
Bdnf-207ENSMUST00000111047 Pnmal2G3X9N3 661 aa9.27□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Prex1Q69ZK0 1650 aa9.27□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Ankrd44B2RXR6 993 aa9.27□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Ssh1Q76I79 1042 aa9.27□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Casq1O09165 405 aa9.27□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Rab11fip3Q8CHD8 1047 aa9.27□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Cabp4Q8VHC5 271 aa9.27□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Mcm10Q0VBD2 885 aa9.26□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms