RNA–Protein interactions for RNA: ENSMUST00000110302.7

Clcn3-205, Transcript of H(+)/Cl(-) exchange transporter 3, mouse

TSL 5 BASIC

Gene Clcn3, Length 3,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (Experimental data)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
Clcn3-205	ENSMUST00000110302	Uspl1	Q3ULM6	1089 aa		11.22	□□□□□ -0.61
Clcn3-205	ENSMUST00000110302	Ptprv	P70289	1705 aa		11.22	□□□□□ -0.61
Clcn3-205	ENSMUST00000110302	Col18a1	P39061	1774 aa		11.21	□□□□□ -0.61
Clcn3-205	ENSMUST00000110302	Trim28	Q62318	834 aa		11.21	□□□□□ -0.61
Clcn3-205	ENSMUST00000110302	Catip	B9EKE5	520 aa		11.2	□□□□□ -0.62
Clcn3-205	ENSMUST00000110302		Q3UJC8	639 aa		11.2	□□□□□ -0.62
Clcn3-205	ENSMUST00000110302	Scn4a	Q9ER60	1841 aa		11.19	□□□□□ -0.62
Clcn3-205	ENSMUST00000110302	Cemip	Q8BI06	1361 aa		11.19	□□□□□ -0.62
Clcn3-205	ENSMUST00000110302	Gsdma	Q9EST1	446 aa		11.19	□□□□□ -0.62
Clcn3-205	ENSMUST00000110302	Uhrf1bp1	B2KF50	1429 aa		11.19	□□□□□ -0.62
Clcn3-205	ENSMUST00000110302	Aplp2	Q06335	707 aa		11.19	□□□□□ -0.62
Clcn3-205	ENSMUST00000110302	Robo1	O89026	1612 aa		11.19	□□□□□ -0.62
Clcn3-205	ENSMUST00000110302	Astn2	Q80Z10	1352 aa		11.18	□□□□□ -0.62
Clcn3-205	ENSMUST00000110302	Tns3	Q5SSZ5	1440 aa		11.18	□□□□□ -0.62
Clcn3-205	ENSMUST00000110302	Nlrp6	Q91WS2	869 aa		11.18	□□□□□ -0.62
Clcn3-205	ENSMUST00000110302	Cdk12	Q14AX6	1484 aa	Known RBP	11.18	□□□□□ -0.62
Clcn3-205	ENSMUST00000110302	Hoxb7	P09024	217 aa		11.17	□□□□□ -0.62
Clcn3-205	ENSMUST00000110302	Calr4	Q3TQS0	420 aa		11.17	□□□□□ -0.62
Clcn3-205	ENSMUST00000110302	Golga2	Q921M4	999 aa		11.17	□□□□□ -0.62
Clcn3-205	ENSMUST00000110302	Crbn	Q8C7D2	445 aa		11.16	□□□□□ -0.62
Clcn3-205	ENSMUST00000110302	Ptpn23	Q6PB44	1692 aa		11.15	□□□□□ -0.62
Clcn3-205	ENSMUST00000110302	Siglec1	Q62230	1695 aa		11.15	□□□□□ -0.62
Clcn3-205	ENSMUST00000110302	Arx	O35085	564 aa		11.15	□□□□□ -0.62
Clcn3-205	ENSMUST00000110302	Plekhh1	Q80TI1	1356 aa		11.15	□□□□□ -0.63
Clcn3-205	ENSMUST00000110302	Slit2	Q9R1B9	1521 aa		11.15	□□□□□ -0.63
Clcn3-205	ENSMUST00000110302	Upf2	A2AT37	1269 aa	Known RBP	11.14	□□□□□ -0.63
Clcn3-205	ENSMUST00000110302	Ralbp1	Q62172	648 aa		11.14	□□□□□ -0.63
Clcn3-205	ENSMUST00000110302	Uhrf1bp1l	A2RSJ4	1457 aa		11.14	□□□□□ -0.63
Clcn3-205	ENSMUST00000110302	Atp7b	Q64446	1462 aa		11.14	□□□□□ -0.63
Clcn3-205	ENSMUST00000110302	Ltbp4	Q8K4G1	1666 aa		11.13	□□□□□ -0.63
Clcn3-205	ENSMUST00000110302	Mycl	P10166	368 aa		11.13	□□□□□ -0.63
Clcn3-205	ENSMUST00000110302	Tet3	Q8BG87	1668 aa		11.13	□□□□□ -0.63
Clcn3-205	ENSMUST00000110302	Eif5b	Q05D44	1216 aa	Known RBP	11.13	□□□□□ -0.63
Clcn3-205	ENSMUST00000110302	Ppp1r15a	P17564	657 aa		11.12	□□□□□ -0.63
Clcn3-205	ENSMUST00000110302	Idi1	P58044	227 aa		11.12	□□□□□ -0.63
Clcn3-205	ENSMUST00000110302	Tnik	P83510	1323 aa		11.12	□□□□□ -0.63
Clcn3-205	ENSMUST00000110302	Safb	D3YXK2	937 aa	Known RBP	11.12	□□□□□ -0.63
Clcn3-205	ENSMUST00000110302	Tsen2	Q6P7W5	460 aa		11.12	□□□□□ -0.63
Clcn3-205	ENSMUST00000110302	Prdm10	Q3UTQ7	1184 aa		11.11	□□□□□ -0.63
Clcn3-205	ENSMUST00000110302	Ccdc30	Q8BVF4	654 aa		11.11	□□□□□ -0.63
Clcn3-205	ENSMUST00000110302	Trpm3	Q5F4S9	1721 aa		11.11	□□□□□ -0.63
Clcn3-205	ENSMUST00000110302	Myo5b	P21271	1818 aa		11.11	□□□□□ -0.63
Clcn3-205	ENSMUST00000110302	Parp14	Q2EMV9	1817 aa		11.11	□□□□□ -0.63
Clcn3-205	ENSMUST00000110302	Pask	Q8CEE6	1383 aa		11.11	□□□□□ -0.63
Clcn3-205	ENSMUST00000110302	1700123L14Rik	Q3V2K7	440 aa		11.11	□□□□□ -0.63
Clcn3-205	ENSMUST00000110302	Scaf1	Q5U4C3	1256 aa	Known RBP	11.11	□□□□□ -0.63
Clcn3-205	ENSMUST00000110302	Tmem2	Q5FWI3	1383 aa		11.1	□□□□□ -0.63
Clcn3-205	ENSMUST00000110302	Tmem94	Q7TSH8	1360 aa		11.1	□□□□□ -0.63
Clcn3-205	ENSMUST00000110302	Gm10563	F6WIE4	79 aa		11.1	□□□□□ -0.63
Clcn3-205	ENSMUST00000110302	Fchsd2	Q3USJ8	740 aa		11.1	□□□□□ -0.63
Clcn3-205	ENSMUST00000110302		Q4VA45	678 aa		11.1	□□□□□ -0.63
Clcn3-205	ENSMUST00000110302	Speer4f1	Q9D5Q6	258 aa		11.1	□□□□□ -0.63
Clcn3-205	ENSMUST00000110302	Nfat5	Q9WV30	1534 aa		11.1	□□□□□ -0.63
Clcn3-205	ENSMUST00000110302	Rad21	Q61550	635 aa	Known RBP	11.09	□□□□□ -0.63
Clcn3-205	ENSMUST00000110302	Ciz1	Q8VEH2	845 aa		11.09	□□□□□ -0.63
Clcn3-205	ENSMUST00000110302	Slc12a5	Q91V14	1138 aa		11.09	□□□□□ -0.63
Clcn3-205	ENSMUST00000110302	Gli3	Q61602	1583 aa		11.09	□□□□□ -0.63
Clcn3-205	ENSMUST00000110302	Znf316	Q6PGE4	1016 aa		11.08	□□□□□ -0.63
Clcn3-205	ENSMUST00000110302	Mlec	Q6ZQI3	291 aa	Known RBP	11.08	□□□□□ -0.63
Clcn3-205	ENSMUST00000110302	U2af1	Q9D883	239 aa	Known RBP	11.07	□□□□□ -0.64
Clcn3-205	ENSMUST00000110302	Rsph6a	Q8CDR2	708 aa		11.07	□□□□□ -0.64
Clcn3-205	ENSMUST00000110302	Bcl11a	Q9QYE3	773 aa		11.07	□□□□□ -0.64
Clcn3-205	ENSMUST00000110302	Rad17	Q6NXW6	688 aa		11.06	□□□□□ -0.64
Clcn3-205	ENSMUST00000110302	Apaf1	O88879	1249 aa		11.06	□□□□□ -0.64
Clcn3-205	ENSMUST00000110302	Arfgef2	A2A5R2	1792 aa		11.06	□□□□□ -0.64
Clcn3-205	ENSMUST00000110302	Abca15	E9PWH4	1668 aa		11.05	□□□□□ -0.64
Clcn3-205	ENSMUST00000110302	Palm	Q9Z0P4	383 aa		11.05	□□□□□ -0.64
Clcn3-205	ENSMUST00000110302	Fanca	Q9JL70	1439 aa		11.05	□□□□□ -0.64
Clcn3-205	ENSMUST00000110302	Cavin4	A2AMM0	362 aa		11.04	□□□□□ -0.64
Clcn3-205	ENSMUST00000110302	Gas2l2	Q5SSG4	860 aa		11.04	□□□□□ -0.64
Clcn3-205	ENSMUST00000110302	Frmpd2	A0A140LI67	1392 aa		11.04	□□□□□ -0.64
Clcn3-205	ENSMUST00000110302	Atxn3	Q9CVD2	355 aa		11.04	□□□□□ -0.64
Clcn3-205	ENSMUST00000110302	Ttc21a	Q8C0S4	1314 aa		11.04	□□□□□ -0.64
Clcn3-205	ENSMUST00000110302	Ano8	Q6PB70	1060 aa		11.03	□□□□□ -0.64
Clcn3-205	ENSMUST00000110302	Ahnak2	E9PYB0	1738 aa	Known RBP	11.03	□□□□□ -0.64
Clcn3-205	ENSMUST00000110302	Dusp27	Q148W8	1138 aa		11.03	□□□□□ -0.64
Clcn3-205	ENSMUST00000110302	Nlgn1	Q99K10	843 aa		11.03	□□□□□ -0.64
Clcn3-205	ENSMUST00000110302	Adgrb1	Q3UHD1	1582 aa		11.02	□□□□□ -0.64
Clcn3-205	ENSMUST00000110302	Ncapd2	Q8K2Z4	1392 aa		11.02	□□□□□ -0.64
Clcn3-205	ENSMUST00000110302	Ankrd50	F7BE84	1390 aa		11.02	□□□□□ -0.65
Clcn3-205	ENSMUST00000110302	Zmym3	Q9JLM4	1370 aa		11.02	□□□□□ -0.65
Clcn3-205	ENSMUST00000110302	Birc3	O08863	600 aa		11.02	□□□□□ -0.65
Clcn3-205	ENSMUST00000110302	Eif4a2	P10630	407 aa		11.01	□□□□□ -0.65
Clcn3-205	ENSMUST00000110302	Tcerg1	Q8CGF7	1100 aa	Known RBP	11.01	□□□□□ -0.65
Clcn3-205	ENSMUST00000110302	Prkrip1	Q9CWV6	186 aa	Known RBP	11.01	□□□□□ -0.65
Clcn3-205	ENSMUST00000110302	Znf521	Q6KAS7	1311 aa		11.01	□□□□□ -0.65
Clcn3-205	ENSMUST00000110302	Ap3b2	Q9JME5	1082 aa		11.01	□□□□□ -0.65
Clcn3-205	ENSMUST00000110302	Mbd3	Q9Z2D8	285 aa	Known RBP	11.01	□□□□□ -0.65
Clcn3-205	ENSMUST00000110302	Rwdd1	Q9CQK7	243 aa		11.01	□□□□□ -0.65
Clcn3-205	ENSMUST00000110302	Focad	A2AKG8	1798 aa		11.01	□□□□□ -0.65
Clcn3-205	ENSMUST00000110302	Neurod2	Q62414	383 aa		11	□□□□□ -0.65
Clcn3-205	ENSMUST00000110302	Ncoa4	Q5U4H9	625 aa		11	□□□□□ -0.65
Clcn3-205	ENSMUST00000110302	Dennd6a	Q8BH65	605 aa		10.99	□□□□□ -0.65
Clcn3-205	ENSMUST00000110302	Slc35g1	Q8BY79	368 aa		10.99	□□□□□ -0.65
Clcn3-205	ENSMUST00000110302	Mapk8ip3	Q9ESN9	1337 aa		10.99	□□□□□ -0.65
Clcn3-205	ENSMUST00000110302	Bcl9l	Q67FY2	1494 aa		10.99	□□□□□ -0.65
Clcn3-205	ENSMUST00000110302	Nid2	O88322	1403 aa		10.98	□□□□□ -0.65
Clcn3-205	ENSMUST00000110302	Slain2	Q8CI08	581 aa		10.98	□□□□□ -0.65
Clcn3-205	ENSMUST00000110302	Wdr17	E9Q271	1322 aa		10.98	□□□□□ -0.65
Clcn3-205	ENSMUST00000110302	Dcc	P70211	1447 aa		10.98	□□□□□ -0.65

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