RNA–Protein interactions for RNA: ENSMUST00000110302.7

Clcn3-205, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

TSL 5 BASIC

Gene Clcn3, Length 3,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-205ENSMUST00000110302 Gm35339A0A140LHH9 1649 aa17.98■□□□□ 0.47
Clcn3-205ENSMUST00000110302 NischQ80TM9 1593 aa17.78■□□□□ 0.44
Clcn3-205ENSMUST00000110302 Abcc9P70170 1546 aa17.35■□□□□ 0.37
Clcn3-205ENSMUST00000110302 Abcc8B2RUS7 1588 aa17.06■□□□□ 0.32
Clcn3-205ENSMUST00000110302 ScribQ80U72 1612 aa16.15■□□□□ 0.18
Clcn3-205ENSMUST00000110302 Dcaf1Q80TR8 1506 aa15.95■□□□□ 0.14
Clcn3-205ENSMUST00000110302 Kdm5dQ62240 1548 aa15.68■□□□□ 0.1
Clcn3-205ENSMUST00000110302 Ccdc180J3QNE4 1664 aa15.68■□□□□ 0.1
Clcn3-205ENSMUST00000110302 Rtl1Q7M732 1744 aa15.66■□□□□ 0.1
Clcn3-205ENSMUST00000110302 NacadQ5SWP3 1504 aa15.6■□□□□ 0.09
Clcn3-205ENSMUST00000110302 Rhox8Q6VSS7 320 aa15.6■□□□□ 0.09
Clcn3-205ENSMUST00000110302 Rb1cc1Q9ESK9 1588 aa15.56■□□□□ 0.08
Clcn3-205ENSMUST00000110302 Baz1aO88379 1555 aa15.41■□□□□ 0.06
Clcn3-205ENSMUST00000110302 Crybg2B7ZCC2 1516 aa15.3■□□□□ 0.04
Clcn3-205ENSMUST00000110302 Sycp2Q9CUU3 1500 aa15.3■□□□□ 0.04
Clcn3-205ENSMUST00000110302 Zcchc6Q5BLK4 1491 aaKnown RBP15.15■□□□□ 0.02
Clcn3-205ENSMUST00000110302 Smarca2Q6DIC0 1577 aa15.07■□□□□ 0
Clcn3-205ENSMUST00000110302 BicraF8VPZ9 1578 aa15.04■□□□□ -0
Clcn3-205ENSMUST00000110302 Cecr2E9Q2Z1 1453 aa14.66□□□□□ -0.06
Clcn3-205ENSMUST00000110302 Smarca4Q3TKT4 1613 aaKnown RBP14.55□□□□□ -0.08
Clcn3-205ENSMUST00000110302 Ccdc136Q3TVA9 1136 aa14.54□□□□□ -0.08
Clcn3-205ENSMUST00000110302 Brd4Q9ESU6 1400 aaKnown RBP14.52□□□□□ -0.08
Clcn3-205ENSMUST00000110302 Synj1Q8CHC4 1574 aa14.52□□□□□ -0.09
Clcn3-205ENSMUST00000110302 Cttnbp2B9EJA2 1648 aa14.49□□□□□ -0.09
Clcn3-205ENSMUST00000110302 CftrP26361 1476 aa14.44□□□□□ -0.1
Clcn3-205ENSMUST00000110302 Trim41Q5NCC3 630 aa14.41□□□□□ -0.1
Clcn3-205ENSMUST00000110302 Iqgap2Q3UQ44 1575 aa14.37□□□□□ -0.11
Clcn3-205ENSMUST00000110302 Atad2bE9Q166 1460 aaKnown RBP14.36□□□□□ -0.11
Clcn3-205ENSMUST00000110302 HrcG5E8J6 738 aa14.34□□□□□ -0.11
Clcn3-205ENSMUST00000110302 Pds5bQ4VA53 1446 aaKnown RBP14.33□□□□□ -0.11
Clcn3-205ENSMUST00000110302 Top2bQ64511 1612 aa14.33□□□□□ -0.12
Clcn3-205ENSMUST00000110302 Golga3P55937 1487 aa14.26□□□□□ -0.13
Clcn3-205ENSMUST00000110302 Wdr62Q3U3T8 1523 aa14.18□□□□□ -0.14
Clcn3-205ENSMUST00000110302 Thoc2B1AZI6 1594 aaKnown RBP14.14□□□□□ -0.15
Clcn3-205ENSMUST00000110302 Unc13aQ4KUS2 1712 aa14.14□□□□□ -0.15
Clcn3-205ENSMUST00000110302 Cep164Q5DU05 1446 aa14.12□□□□□ -0.15
Clcn3-205ENSMUST00000110302 Cc2d2aQ8CFW7 1633 aa14.11□□□□□ -0.15
Clcn3-205ENSMUST00000110302 Frmpd1A2AKB4 1549 aa14.11□□□□□ -0.15
Clcn3-205ENSMUST00000110302 Rsf1E9PWW9 1441 aaKnown RBP14.06□□□□□ -0.16
Clcn3-205ENSMUST00000110302 TnnQ80Z71 1560 aa14.05□□□□□ -0.16
Clcn3-205ENSMUST00000110302 Ccdc88bQ4QRL3 1481 aa14.03□□□□□ -0.16
Clcn3-205ENSMUST00000110302 Ercc6F8VPZ5 1481 aa14.02□□□□□ -0.17
Clcn3-205ENSMUST00000110302 Fmn1Q05860 1466 aa13.99□□□□□ -0.17
Clcn3-205ENSMUST00000110302 Lamc3Q9R0B6 1581 aa13.95□□□□□ -0.18
Clcn3-205ENSMUST00000110302 Cngb1E1AZ71 1325 aa13.94□□□□□ -0.18
Clcn3-205ENSMUST00000110302 Top2aQ01320 1528 aaKnown RBP13.93□□□□□ -0.18
Clcn3-205ENSMUST00000110302 Esf1Q3V1V3 845 aaKnown RBP13.92□□□□□ -0.18
Clcn3-205ENSMUST00000110302 Fam135aQ6NS59 1506 aa13.91□□□□□ -0.18
Clcn3-205ENSMUST00000110302 Chic1Q8CBW7 227 aa13.91□□□□□ -0.18
Clcn3-205ENSMUST00000110302 Phldb1Q6PDH0 1371 aaKnown RBP13.8□□□□□ -0.2
Clcn3-205ENSMUST00000110302 Baz1bQ9Z277 1479 aa13.77□□□□□ -0.2
Clcn3-205ENSMUST00000110302 Camsap1A2AHC3 1581 aa13.74□□□□□ -0.21
Clcn3-205ENSMUST00000110302 Rapgef2Q8CHG7 1496 aa13.73□□□□□ -0.21
Clcn3-205ENSMUST00000110302 Eif4g1Q6NZJ6 1600 aaKnown RBP13.73□□□□□ -0.21
Clcn3-205ENSMUST00000110302 Kif15Q6P9L6 1387 aa13.67□□□□□ -0.22
Clcn3-205ENSMUST00000110302 NrkQ9R0G8 1455 aa13.6□□□□□ -0.23
Clcn3-205ENSMUST00000110302 Grin2bQ01097 1482 aa13.58□□□□□ -0.24
Clcn3-205ENSMUST00000110302 Ccdc18Q640L5 1455 aa13.57□□□□□ -0.24
Clcn3-205ENSMUST00000110302 Cux2P70298 1426 aa13.55□□□□□ -0.24
Clcn3-205ENSMUST00000110302 Shroom4Q1W617 1475 aa13.55□□□□□ -0.24
Clcn3-205ENSMUST00000110302 Cep162Q6ZQ06 1403 aa13.54□□□□□ -0.24
Clcn3-205ENSMUST00000110302 PtprkP35822 1457 aa13.53□□□□□ -0.24
Clcn3-205ENSMUST00000110302 Gab3Q8BSM5 595 aa13.51□□□□□ -0.25
Clcn3-205ENSMUST00000110302 Ubl4bQ9CQ84 188 aa13.5□□□□□ -0.25
Clcn3-205ENSMUST00000110302 Mrc2Q64449 1479 aa13.48□□□□□ -0.25
Clcn3-205ENSMUST00000110302 Arhgap35Q91YM2 1499 aa13.48□□□□□ -0.25
Clcn3-205ENSMUST00000110302 Dnajc5bQ9CQ94 199 aa13.48□□□□□ -0.25
Clcn3-205ENSMUST00000110302 Map3k1P53349 1493 aa13.47□□□□□ -0.25
Clcn3-205ENSMUST00000110302 Kif21aQ9QXL2 1672 aa13.47□□□□□ -0.25
Clcn3-205ENSMUST00000110302 PogzQ8BZH4 1409 aaKnown RBP13.44□□□□□ -0.26
Clcn3-205ENSMUST00000110302 LrpprcQ6PB66 1392 aaKnown RBP13.42□□□□□ -0.26
Clcn3-205ENSMUST00000110302 Efcab5A0JP43 1406 aa13.41□□□□□ -0.26
Clcn3-205ENSMUST00000110302 Mroh2bQ7M6Y6 1581 aa13.4□□□□□ -0.26
Clcn3-205ENSMUST00000110302 AqrQ8CFQ3 1481 aaKnown RBP13.39□□□□□ -0.27
Clcn3-205ENSMUST00000110302 Duox2A2AQ99 1517 aa13.39□□□□□ -0.27
Clcn3-205ENSMUST00000110302 Samd9lQ69Z37 1561 aa13.37□□□□□ -0.27
Clcn3-205ENSMUST00000110302 Crocc2F6XLV1 1638 aa13.37□□□□□ -0.27
Clcn3-205ENSMUST00000110302 Gpatch8A2A6A1 1505 aa13.36□□□□□ -0.27
Clcn3-205ENSMUST00000110302 Erich3F6QRE9 1637 aa13.35□□□□□ -0.27
Clcn3-205ENSMUST00000110302 Dhx29Q6PGC1 1365 aaKnown RBP13.32□□□□□ -0.28
Clcn3-205ENSMUST00000110302 Npm1Q61937 292 aaKnown RBP13.31□□□□□ -0.28
Clcn3-205ENSMUST00000110302 SynmQ70IV5 1561 aa13.31□□□□□ -0.28
Clcn3-205ENSMUST00000110302 Il27Q8K3I6 234 aa13.3□□□□□ -0.28
Clcn3-205ENSMUST00000110302 Acin1Q9JIX8 1338 aaKnown RBP13.28□□□□□ -0.28
Clcn3-205ENSMUST00000110302 Setd1bQ8CFT2 1985 aa13.28□□□□□ -0.28
Clcn3-205ENSMUST00000110302 Ankrd26Q811D2 1581 aa13.27□□□□□ -0.29
Clcn3-205ENSMUST00000110302 Rpgrip1Q9EPQ2 1331 aa13.25□□□□□ -0.29
Clcn3-205ENSMUST00000110302 Npm2Q80W85 207 aa13.25□□□□□ -0.29
Clcn3-205ENSMUST00000110302 Lmo7E9PYF4 1699 aaKnown RBP13.24□□□□□ -0.29
Clcn3-205ENSMUST00000110302 Lrriq1Q0P5X1 1673 aa13.24□□□□□ -0.29
Clcn3-205ENSMUST00000110302 Ehmt2Q9Z148 1263 aaKnown RBP13.24□□□□□ -0.29
Clcn3-205ENSMUST00000110302 Pbrm1Q8BSQ9 1634 aaKnown RBP13.23□□□□□ -0.29
Clcn3-205ENSMUST00000110302 Clip1Q922J3 1391 aa13.22□□□□□ -0.29
Clcn3-205ENSMUST00000110302 Urb2E9Q7L1 1524 aaKnown RBP13.21□□□□□ -0.29
Clcn3-205ENSMUST00000110302 Arap1Q4LDD4 1452 aa13.21□□□□□ -0.3
Clcn3-205ENSMUST00000110302 Arhgef5E9Q7D5 1581 aa13.21□□□□□ -0.3
Clcn3-205ENSMUST00000110302 Magi3Q9EQJ9 1476 aa13.2□□□□□ -0.3
Clcn3-205ENSMUST00000110302 Carmil1Q6EDY6 1374 aa13.2□□□□□ -0.3
Clcn3-205ENSMUST00000110302 Polr1aO35134 1717 aaKnown RBP13.19□□□□□ -0.3
Clcn3-205ENSMUST00000110302 Pla2r1Q62028 1487 aa13.18□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 21 ms