RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Apbb1Q9QXJ1 710 aa19.39■□□□□ 0.69
Nup88-202ENSMUST00000108530 Iqsec2Q5DU25 1478 aa19.38■□□□□ 0.69
Nup88-202ENSMUST00000108530 Chd4Q6PDQ2 1915 aaKnown RBP19.38■□□□□ 0.69
Nup88-202ENSMUST00000108530 Ralbp1Q62172 648 aa19.38■□□□□ 0.69
Nup88-202ENSMUST00000108530 Trim28Q62318 834 aa19.37■□□□□ 0.69
Nup88-202ENSMUST00000108530 Sirt1Q923E4 737 aa19.37■□□□□ 0.69
Nup88-202ENSMUST00000108530 Kif20bQ80WE4 1774 aaKnown RBP19.37■□□□□ 0.69
Nup88-202ENSMUST00000108530 PalmQ9Z0P4 383 aa19.37■□□□□ 0.69
Nup88-202ENSMUST00000108530 D430041D05RikF6ZGR6 1678 aa19.36■□□□□ 0.69
Nup88-202ENSMUST00000108530 Ppp4r2Q0VGB7 417 aa19.36■□□□□ 0.69
Nup88-202ENSMUST00000108530 Plekhh1Q80TI1 1356 aa19.35■□□□□ 0.69
Nup88-202ENSMUST00000108530 N4bp2F8VQG7 1678 aaKnown RBP19.35■□□□□ 0.69
Nup88-202ENSMUST00000108530 Abcc10Q8R4P9 1501 aa19.34■□□□□ 0.69
Nup88-202ENSMUST00000108530 Uhrf1bp1lA2RSJ4 1457 aa19.34■□□□□ 0.69
Nup88-202ENSMUST00000108530 Dusp27Q148W8 1138 aa19.33■□□□□ 0.69
Nup88-202ENSMUST00000108530 Mapk8ip3Q9ESN9 1337 aa19.33■□□□□ 0.69
Nup88-202ENSMUST00000108530 Wdr43Q6ZQL4 677 aaKnown RBP19.33■□□□□ 0.68
Nup88-202ENSMUST00000108530 Rims2Q9EQZ7 1530 aa19.32■□□□□ 0.68
Nup88-202ENSMUST00000108530 Kif1aP33173 1695 aa19.32■□□□□ 0.68
Nup88-202ENSMUST00000108530 Ap3b2Q9JME5 1082 aa19.32■□□□□ 0.68
Nup88-202ENSMUST00000108530 Lmtk3Q5XJV6 1424 aa19.31■□□□□ 0.68
Nup88-202ENSMUST00000108530 C5P06684 1680 aa19.31■□□□□ 0.68
Nup88-202ENSMUST00000108530 Rimbp3Q3V0F0 1606 aa19.31■□□□□ 0.68
Nup88-202ENSMUST00000108530 Nolc1E9Q5C9 702 aaKnown RBP19.3■□□□□ 0.68
Nup88-202ENSMUST00000108530 Slc4a3P16283 1227 aa19.3■□□□□ 0.68
Nup88-202ENSMUST00000108530 Ppp1r15aP17564 657 aa19.3■□□□□ 0.68
Nup88-202ENSMUST00000108530 Trim26Q99PN3 545 aa19.3■□□□□ 0.68
Nup88-202ENSMUST00000108530 Rwdd1Q9CQK7 243 aa19.3■□□□□ 0.68
Nup88-202ENSMUST00000108530 Als2Q920R0 1651 aa19.3■□□□□ 0.68
Nup88-202ENSMUST00000108530 Ttc41Q692V3 1318 aa19.3■□□□□ 0.68
Nup88-202ENSMUST00000108530 Plin1Q8CGN5 517 aa19.3■□□□□ 0.68
Nup88-202ENSMUST00000108530 Mcm10Q0VBD2 885 aa19.29■□□□□ 0.68
Nup88-202ENSMUST00000108530 Polr3glQ8R0C0 218 aa19.29■□□□□ 0.68
Nup88-202ENSMUST00000108530 Anp32aO35381 247 aa19.28■□□□□ 0.68
Nup88-202ENSMUST00000108530 Tns3Q5SSZ5 1440 aa19.28■□□□□ 0.68
Nup88-202ENSMUST00000108530 Astn2Q80Z10 1352 aa19.27■□□□□ 0.68
Nup88-202ENSMUST00000108530 Rsph6aQ8CDR2 708 aa19.27■□□□□ 0.68
Nup88-202ENSMUST00000108530 C3P01027 1663 aa19.27■□□□□ 0.67
Nup88-202ENSMUST00000108530 Ksr2Q3UVC0 959 aa19.27■□□□□ 0.67
Nup88-202ENSMUST00000108530 Slc35g1Q8BY79 368 aa19.27■□□□□ 0.67
Nup88-202ENSMUST00000108530 NeflP08551 543 aa19.26■□□□□ 0.67
Nup88-202ENSMUST00000108530 Q4VA45 678 aa19.26■□□□□ 0.67
Nup88-202ENSMUST00000108530 Med1Q925J9 1575 aa19.26■□□□□ 0.67
Nup88-202ENSMUST00000108530 Znf335A2A5K6 1337 aa19.26■□□□□ 0.67
Nup88-202ENSMUST00000108530 Nckap5lQ6GQX2 1323 aa19.26■□□□□ 0.67
Nup88-202ENSMUST00000108530 Cavin4A2AMM0 362 aa19.25■□□□□ 0.67
Nup88-202ENSMUST00000108530 NalcnQ8BXR5 1738 aa19.25■□□□□ 0.67
Nup88-202ENSMUST00000108530 Gm21190A0A0G2JGJ6 266 aa19.25■□□□□ 0.67
Nup88-202ENSMUST00000108530 Dennd6aQ8BH65 605 aa19.24■□□□□ 0.67
Nup88-202ENSMUST00000108530 Thsd7aQ69ZU6 1645 aa19.24■□□□□ 0.67
Nup88-202ENSMUST00000108530 Hoxb7P09024 217 aa19.24■□□□□ 0.67
Nup88-202ENSMUST00000108530 Frmpd2A0A140LI67 1392 aa19.24■□□□□ 0.67
Nup88-202ENSMUST00000108530 Pik3c2aQ61194 1686 aa19.23■□□□□ 0.67
Nup88-202ENSMUST00000108530 Cabp4Q8VHC5 271 aa19.23■□□□□ 0.67
Nup88-202ENSMUST00000108530 Eif4a2P10630 407 aa19.22■□□□□ 0.67
Nup88-202ENSMUST00000108530 MpripP97434 1024 aa19.22■□□□□ 0.67
Nup88-202ENSMUST00000108530 Nlgn1Q99K10 843 aa19.22■□□□□ 0.67
Nup88-202ENSMUST00000108530 Senp3Q9EP97 568 aaKnown RBP19.22■□□□□ 0.67
Nup88-202ENSMUST00000108530 Mon2Q80TL7 1715 aa19.22■□□□□ 0.67
Nup88-202ENSMUST00000108530 Fchsd2Q3USJ8 740 aa19.21■□□□□ 0.67
Nup88-202ENSMUST00000108530 Col14a1Q80X19 1797 aa19.21■□□□□ 0.67
Nup88-202ENSMUST00000108530 Cabp2Q9JLK4 216 aa19.2■□□□□ 0.66
Nup88-202ENSMUST00000108530 Sipa1l2Q80TE4 1722 aa19.2■□□□□ 0.66
Nup88-202ENSMUST00000108530 Evi5lH3BKQ3 813 aa19.19■□□□□ 0.66
Nup88-202ENSMUST00000108530 Pip4k2bQ80XI4 416 aa19.19■□□□□ 0.66
Nup88-202ENSMUST00000108530 FancaQ9JL70 1439 aa19.19■□□□□ 0.66
Nup88-202ENSMUST00000108530 Cdk12Q14AX6 1484 aaKnown RBP19.19■□□□□ 0.66
Nup88-202ENSMUST00000108530 Slain2Q8CI08 581 aa19.19■□□□□ 0.66
Nup88-202ENSMUST00000108530 CemipQ8BI06 1361 aa19.18■□□□□ 0.66
Nup88-202ENSMUST00000108530 Rangap1P46061 589 aaKnown RBP19.18■□□□□ 0.66
Nup88-202ENSMUST00000108530 Swt1Q9DBQ9 907 aa19.18■□□□□ 0.66
Nup88-202ENSMUST00000108530 Nrxn3Q6P9K9 1571 aa19.17■□□□□ 0.66
Nup88-202ENSMUST00000108530 Col16a1Q8BLX7 1580 aa19.17■□□□□ 0.66
Nup88-202ENSMUST00000108530 Pank1Q8K4K6 548 aa19.17■□□□□ 0.66
Nup88-202ENSMUST00000108530 Prkrip1Q9CWV6 186 aaKnown RBP19.17■□□□□ 0.66
Nup88-202ENSMUST00000108530 Ubr1O70481 1757 aa19.16■□□□□ 0.66
Nup88-202ENSMUST00000108530 Phlpp1Q8CHE4 1687 aa19.16■□□□□ 0.66
Nup88-202ENSMUST00000108530 Camta1A2A891 1682 aa19.15■□□□□ 0.66
Nup88-202ENSMUST00000108530 Map2P20357 1828 aa19.15■□□□□ 0.66
Nup88-202ENSMUST00000108530 Tmem2Q5FWI3 1383 aa19.15■□□□□ 0.66
Nup88-202ENSMUST00000108530 Ccar1Q8CH18 1146 aaKnown RBP19.14■□□□□ 0.66
Nup88-202ENSMUST00000108530 Uhrf1bp1B2KF50 1429 aa19.14■□□□□ 0.65
Nup88-202ENSMUST00000108530 Tspyl2Q7TQI8 677 aa19.14■□□□□ 0.65
Nup88-202ENSMUST00000108530 Ciz1Q8VEH2 845 aa19.14■□□□□ 0.65
Nup88-202ENSMUST00000108530 Rbm25B2RY56 838 aaKnown RBP19.13■□□□□ 0.65
Nup88-202ENSMUST00000108530 Ncbp3Q8BZR9 615 aaKnown RBP19.13■□□□□ 0.65
Nup88-202ENSMUST00000108530 Supt16hQ920B9 1047 aa19.13■□□□□ 0.65
Nup88-202ENSMUST00000108530 PaskQ8CEE6 1383 aa19.13■□□□□ 0.65
Nup88-202ENSMUST00000108530 Spef2Q8C9J3 1734 aa19.13■□□□□ 0.65
Nup88-202ENSMUST00000108530 Parp14Q2EMV9 1817 aa19.12■□□□□ 0.65
Nup88-202ENSMUST00000108530 TnikP83510 1323 aa19.12■□□□□ 0.65
Nup88-202ENSMUST00000108530 Ankrd50F7BE84 1390 aa19.12■□□□□ 0.65
Nup88-202ENSMUST00000108530 Znf541Q0GGX2 1363 aa19.12■□□□□ 0.65
Nup88-202ENSMUST00000108530 Scn4aQ9ER60 1841 aa19.11■□□□□ 0.65
Nup88-202ENSMUST00000108530 Ccne1Q61457 408 aa19.11■□□□□ 0.65
Nup88-202ENSMUST00000108530 Tmem132eQ6IEE6 982 aa19.11■□□□□ 0.65
Nup88-202ENSMUST00000108530 Ttc21aQ8C0S4 1314 aa19.11■□□□□ 0.65
Nup88-202ENSMUST00000108530 Fyb1O35601 819 aa19.11■□□□□ 0.65
Nup88-202ENSMUST00000108530 CastP51125 788 aa19.1■□□□□ 0.65
Nup88-202ENSMUST00000108530 Stk31Q99MW1 1018 aa19.1■□□□□ 0.65
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms