RNA–Protein interactions for RNA: ENSMUST00000106107.2

Rab40b-201, Transcript of Ras-related protein Rab-40B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rab40b, Length 1,861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40b-201ENSMUST00000106107 Sox12Q04890 314 aa29■■■□□ 2.23
Rab40b-201ENSMUST00000106107 Tsen2Q6P7W5 460 aa28.98■■■□□ 2.23
Rab40b-201ENSMUST00000106107 Scn4aQ9ER60 1841 aa28.98■■■□□ 2.23
Rab40b-201ENSMUST00000106107 Unc13bQ9Z1N9 1602 aa28.96■■■□□ 2.23
Rab40b-201ENSMUST00000106107 Erbb3Q61526 1339 aa28.95■■■□□ 2.22
Rab40b-201ENSMUST00000106107 Birc3O08863 600 aa28.95■■■□□ 2.22
Rab40b-201ENSMUST00000106107 Kank1E9Q238 1360 aa28.94■■■□□ 2.22
Rab40b-201ENSMUST00000106107 U2af1Q9D883 239 aaKnown RBP28.94■■■□□ 2.22
Rab40b-201ENSMUST00000106107 Sipa1l2Q80TE4 1722 aa28.94■■■□□ 2.22
Rab40b-201ENSMUST00000106107 Astn2Q80Z10 1352 aa28.93■■■□□ 2.22
Rab40b-201ENSMUST00000106107 Slc12a5Q91V14 1138 aa28.92■■■□□ 2.22
Rab40b-201ENSMUST00000106107 Pik3c2aQ61194 1686 aa28.92■■■□□ 2.22
Rab40b-201ENSMUST00000106107 Tcerg1Q8CGF7 1100 aaKnown RBP28.91■■■□□ 2.22
Rab40b-201ENSMUST00000106107 Speer4f1Q9D5Q6 258 aa28.91■■■□□ 2.22
Rab40b-201ENSMUST00000106107 Hoxb7P09024 217 aa28.89■■■□□ 2.22
Rab40b-201ENSMUST00000106107 Ap3b2Q9JME5 1082 aa28.89■■■□□ 2.22
Rab40b-201ENSMUST00000106107 Apaf1O88879 1249 aa28.87■■■□□ 2.21
Rab40b-201ENSMUST00000106107 Ppp1r15aP17564 657 aa28.87■■■□□ 2.21
Rab40b-201ENSMUST00000106107 Slain2Q8CI08 581 aa28.87■■■□□ 2.21
Rab40b-201ENSMUST00000106107 Rapgef3Q8VCC8 918 aa28.87■■■□□ 2.21
Rab40b-201ENSMUST00000106107 Col16a1Q8BLX7 1580 aa28.86■■■□□ 2.21
Rab40b-201ENSMUST00000106107 CemipQ8BI06 1361 aa28.86■■■□□ 2.21
Rab40b-201ENSMUST00000106107 Ltbp4Q8K4G1 1666 aa28.86■■■□□ 2.21
Rab40b-201ENSMUST00000106107 Tmem2Q5FWI3 1383 aa28.85■■■□□ 2.21
Rab40b-201ENSMUST00000106107 Calr4Q3TQS0 420 aa28.85■■■□□ 2.21
Rab40b-201ENSMUST00000106107 Neurod2Q62414 383 aa28.83■■■□□ 2.21
Rab40b-201ENSMUST00000106107 Cdk12Q14AX6 1484 aaKnown RBP28.83■■■□□ 2.21
Rab40b-201ENSMUST00000106107 Col18a1P39061 1774 aa28.82■■■□□ 2.2
Rab40b-201ENSMUST00000106107 Uhrf1bp1lA2RSJ4 1457 aa28.82■■■□□ 2.2
Rab40b-201ENSMUST00000106107 Ubr1O70481 1757 aa28.82■■■□□ 2.2
Rab40b-201ENSMUST00000106107 Slc35g1Q8BY79 368 aa28.82■■■□□ 2.2
Rab40b-201ENSMUST00000106107 Ccdc30Q8BVF4 654 aa28.81■■■□□ 2.2
Rab40b-201ENSMUST00000106107 Frmpd2A0A140LI67 1392 aa28.8■■■□□ 2.2
Rab40b-201ENSMUST00000106107 Ralbp1Q62172 648 aa28.8■■■□□ 2.2
Rab40b-201ENSMUST00000106107 PalmQ9Z0P4 383 aa28.79■■■□□ 2.2
Rab40b-201ENSMUST00000106107 Mdc1Q5PSV9 1707 aa28.78■■■□□ 2.2
Rab40b-201ENSMUST00000106107 Ttc41Q692V3 1318 aa28.78■■■□□ 2.2
Rab40b-201ENSMUST00000106107 Pip4k2bQ80XI4 416 aa28.78■■■□□ 2.2
Rab40b-201ENSMUST00000106107 Nlgn1Q99K10 843 aa28.78■■■□□ 2.2
Rab40b-201ENSMUST00000106107 Rsph6aQ8CDR2 708 aa28.76■■■□□ 2.2
Rab40b-201ENSMUST00000106107 Camta1A2A891 1682 aa28.76■■■□□ 2.2
Rab40b-201ENSMUST00000106107 Dennd6aQ8BH65 605 aa28.76■■■□□ 2.19
Rab40b-201ENSMUST00000106107 SafbD3YXK2 937 aaKnown RBP28.75■■■□□ 2.19
Rab40b-201ENSMUST00000106107 Znf541Q0GGX2 1363 aa28.75■■■□□ 2.19
Rab40b-201ENSMUST00000106107 Evi5lH3BKQ3 813 aa28.74■■■□□ 2.19
Rab40b-201ENSMUST00000106107 Map2P20357 1828 aa28.74■■■□□ 2.19
Rab40b-201ENSMUST00000106107 Ncbp3Q8BZR9 615 aaKnown RBP28.74■■■□□ 2.19
Rab40b-201ENSMUST00000106107 Fchsd2Q3USJ8 740 aa28.73■■■□□ 2.19
Rab40b-201ENSMUST00000106107 Q4VA45 678 aa28.73■■■□□ 2.19
Rab40b-201ENSMUST00000106107 Atxn3Q9CVD2 355 aa28.73■■■□□ 2.19
Rab40b-201ENSMUST00000106107 Nckap5lQ6GQX2 1323 aa28.73■■■□□ 2.19
Rab40b-201ENSMUST00000106107 Gas2l2Q5SSG4 860 aa28.72■■■□□ 2.19
Rab40b-201ENSMUST00000106107 Scn7aB1AYL1 1681 aa28.72■■■□□ 2.19
Rab40b-201ENSMUST00000106107 Upf2A2AT37 1269 aaKnown RBP28.72■■■□□ 2.19
Rab40b-201ENSMUST00000106107 Amigo3Q8C2S7 508 aa28.71■■■□□ 2.19
Rab40b-201ENSMUST00000106107 Fam135bQ9DAI6 1403 aa28.69■■■□□ 2.18
Rab40b-201ENSMUST00000106107 Eif4a2P10630 407 aa28.69■■■□□ 2.18
Rab40b-201ENSMUST00000106107 Dusp27Q148W8 1138 aa28.69■■■□□ 2.18
Rab40b-201ENSMUST00000106107 Gm21190A0A0G2JGJ6 266 aa28.68■■■□□ 2.18
Rab40b-201ENSMUST00000106107 FancaQ9JL70 1439 aa28.67■■■□□ 2.18
Rab40b-201ENSMUST00000106107 Spef2Q8C9J3 1734 aa28.67■■■□□ 2.18
Rab40b-201ENSMUST00000106107 Mapk8ip3Q9ESN9 1337 aa28.67■■■□□ 2.18
Rab40b-201ENSMUST00000106107 Plekhh1Q80TI1 1356 aa28.66■■■□□ 2.18
Rab40b-201ENSMUST00000106107 Wdr17E9Q271 1322 aa28.66■■■□□ 2.18
Rab40b-201ENSMUST00000106107 Cabp4Q8VHC5 271 aa28.66■■■□□ 2.18
Rab40b-201ENSMUST00000106107 Cavin4A2AMM0 362 aa28.64■■■□□ 2.18
Rab40b-201ENSMUST00000106107 Uhrf1bp1B2KF50 1429 aa28.64■■■□□ 2.18
Rab40b-201ENSMUST00000106107 Wnk3Q80XP9 1757 aa28.63■■■□□ 2.17
Rab40b-201ENSMUST00000106107 Ecm2Q5FW85 670 aa28.62■■■□□ 2.17
Rab40b-201ENSMUST00000106107 Kcna6Q61923 529 aa28.62■■■□□ 2.17
Rab40b-201ENSMUST00000106107 PtprvP70289 1705 aa28.61■■■□□ 2.17
Rab40b-201ENSMUST00000106107 Ncapd2Q8K2Z4 1392 aa28.6■■■□□ 2.17
Rab40b-201ENSMUST00000106107 Fyb1O35601 819 aa28.6■■■□□ 2.17
Rab40b-201ENSMUST00000106107 Mcm10Q0VBD2 885 aa28.6■■■□□ 2.17
Rab40b-201ENSMUST00000106107 Ciz1Q8VEH2 845 aa28.6■■■□□ 2.17
Rab40b-201ENSMUST00000106107 Ncoa4Q5U4H9 625 aa28.59■■■□□ 2.17
Rab40b-201ENSMUST00000106107 Ano8Q6PB70 1060 aa28.59■■■□□ 2.17
Rab40b-201ENSMUST00000106107 Farp2Q91VS8 1065 aa28.59■■■□□ 2.17
Rab40b-201ENSMUST00000106107 TimelessQ9R1X4 1197 aa28.58■■■□□ 2.17
Rab40b-201ENSMUST00000106107 MpripP97434 1024 aa28.57■■■□□ 2.16
Rab40b-201ENSMUST00000106107 Scaf1Q5U4C3 1256 aaKnown RBP28.56■■■□□ 2.16
Rab40b-201ENSMUST00000106107 PaskQ8CEE6 1383 aa28.56■■■□□ 2.16
Rab40b-201ENSMUST00000106107 GnpatP98192 678 aa28.55■■■□□ 2.16
Rab40b-201ENSMUST00000106107 Atf3Q60765 181 aa28.55■■■□□ 2.16
Rab40b-201ENSMUST00000106107 Parp14Q2EMV9 1817 aa28.54■■■□□ 2.16
Rab40b-201ENSMUST00000106107 Gm38655A0A286YDK6 273 aa28.54■■■□□ 2.16
Rab40b-201ENSMUST00000106107 Swt1Q9DBQ9 907 aa28.53■■■□□ 2.16
Rab40b-201ENSMUST00000106107 Rad17Q6NXW6 688 aa28.53■■■□□ 2.16
Rab40b-201ENSMUST00000106107 Nfat5Q9WV30 1534 aa28.52■■■□□ 2.16
Rab40b-201ENSMUST00000106107 Hoxc9P09633 260 aa28.52■■■□□ 2.16
Rab40b-201ENSMUST00000106107 Gimap6Q8K349 305 aa28.52■■■□□ 2.16
Rab40b-201ENSMUST00000106107 Aplp2Q06335 707 aa28.51■■■□□ 2.15
Rab40b-201ENSMUST00000106107 Atp7bQ64446 1462 aa28.51■■■□□ 2.15
Rab40b-201ENSMUST00000106107 Robo1O89026 1612 aa28.51■■■□□ 2.15
Rab40b-201ENSMUST00000106107 Rwdd1Q9CQK7 243 aa28.51■■■□□ 2.15
Rab40b-201ENSMUST00000106107 Cabp2Q9JLK4 216 aa28.5■■■□□ 2.15
Rab40b-201ENSMUST00000106107 Ddx17Q501J6 650 aaKnown RBP28.49■■■□□ 2.15
Rab40b-201ENSMUST00000106107 Tmem132eQ6IEE6 982 aa28.49■■■□□ 2.15
Rab40b-201ENSMUST00000106107 Gli3Q61602 1583 aa28.49■■■□□ 2.15
Rab40b-201ENSMUST00000106107 Kcnh8P59111 1102 aa28.49■■■□□ 2.15
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms