RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Col18a1P39061 1774 aa30.48■■■□□ 2.47
Upf3a-201ENSMUST00000043767 Atf7ipQ7TT18 1306 aa30.46■■■□□ 2.47
Upf3a-201ENSMUST00000043767 Amigo3Q8C2S7 508 aa30.45■■■□□ 2.46
Upf3a-201ENSMUST00000043767 Znf335A2A5K6 1337 aa30.44■■■□□ 2.46
Upf3a-201ENSMUST00000043767 Esx1O88933 382 aa30.43■■■□□ 2.46
Upf3a-201ENSMUST00000043767 Kiaa1107Q80TK0 1369 aa30.42■■■□□ 2.46
Upf3a-201ENSMUST00000043767 Tmem2Q5FWI3 1383 aa30.41■■■□□ 2.46
Upf3a-201ENSMUST00000043767 Birc3O08863 600 aa30.4■■■□□ 2.46
Upf3a-201ENSMUST00000043767 Calr4Q3TQS0 420 aa30.39■■■□□ 2.46
Upf3a-201ENSMUST00000043767 Slc35g1Q8BY79 368 aa30.38■■■□□ 2.45
Upf3a-201ENSMUST00000043767 Kif1aP33173 1695 aa30.38■■■□□ 2.45
Upf3a-201ENSMUST00000043767 Chd4Q6PDQ2 1915 aaKnown RBP30.37■■■□□ 2.45
Upf3a-201ENSMUST00000043767 Mak16Q8BGS0 296 aaKnown RBP30.35■■■□□ 2.45
Upf3a-201ENSMUST00000043767 Astn2Q80Z10 1352 aa30.35■■■□□ 2.45
Upf3a-201ENSMUST00000043767 Pik3c2aQ61194 1686 aa30.35■■■□□ 2.45
Upf3a-201ENSMUST00000043767 GsdmaQ9EST1 446 aa30.34■■■□□ 2.45
Upf3a-201ENSMUST00000043767 Gli3Q61602 1583 aa30.32■■■□□ 2.44
Upf3a-201ENSMUST00000043767 Frmpd2A0A140LI67 1392 aa30.32■■■□□ 2.44
Upf3a-201ENSMUST00000043767 Atf3Q60765 181 aa30.29■■■□□ 2.44
Upf3a-201ENSMUST00000043767 Ofd1Q80Z25 1017 aa30.28■■■□□ 2.44
Upf3a-201ENSMUST00000043767 Col16a1Q8BLX7 1580 aa30.28■■■□□ 2.44
Upf3a-201ENSMUST00000043767 Trim28Q62318 834 aa30.27■■■□□ 2.44
Upf3a-201ENSMUST00000043767 Tsen2Q6P7W5 460 aa30.26■■■□□ 2.43
Upf3a-201ENSMUST00000043767 GnpatP98192 678 aa30.24■■■□□ 2.43
Upf3a-201ENSMUST00000043767 Dennd6aQ8BH65 605 aa30.24■■■□□ 2.43
Upf3a-201ENSMUST00000043767 CemipQ8BI06 1361 aa30.24■■■□□ 2.43
Upf3a-201ENSMUST00000043767 Cdk12Q14AX6 1484 aaKnown RBP30.24■■■□□ 2.43
Upf3a-201ENSMUST00000043767 Camta1A2A891 1682 aa30.24■■■□□ 2.43
Upf3a-201ENSMUST00000043767 Farp2Q91VS8 1065 aa30.24■■■□□ 2.43
Upf3a-201ENSMUST00000043767 Wdr17E9Q271 1322 aa30.23■■■□□ 2.43
Upf3a-201ENSMUST00000043767 Kcna6Q61923 529 aa30.23■■■□□ 2.43
Upf3a-201ENSMUST00000043767 Nlgn1Q99K10 843 aa30.23■■■□□ 2.43
Upf3a-201ENSMUST00000043767 Hoxb7P09024 217 aa30.23■■■□□ 2.43
Upf3a-201ENSMUST00000043767 Gm21190A0A0G2JGJ6 266 aa30.22■■■□□ 2.43
Upf3a-201ENSMUST00000043767 Golga2Q921M4 999 aa30.22■■■□□ 2.43
Upf3a-201ENSMUST00000043767 U2af1Q9D883 239 aaKnown RBP30.22■■■□□ 2.43
Upf3a-201ENSMUST00000043767 Usp19Q3UJD6 1360 aa30.21■■■□□ 2.43
Upf3a-201ENSMUST00000043767 Nckap5lQ6GQX2 1323 aa30.21■■■□□ 2.43
Upf3a-201ENSMUST00000043767 Rad21Q61550 635 aaKnown RBP30.21■■■□□ 2.43
Upf3a-201ENSMUST00000043767 Slc12a5Q91V14 1138 aa30.21■■■□□ 2.43
Upf3a-201ENSMUST00000043767 CrbnQ8C7D2 445 aa30.21■■■□□ 2.43
Upf3a-201ENSMUST00000043767 Tcerg1Q8CGF7 1100 aaKnown RBP30.21■■■□□ 2.43
Upf3a-201ENSMUST00000043767 Ddx17Q501J6 650 aaKnown RBP30.2■■■□□ 2.43
Upf3a-201ENSMUST00000043767 Fyb1O35601 819 aa30.19■■■□□ 2.42
Upf3a-201ENSMUST00000043767 Ubr1O70481 1757 aa30.19■■■□□ 2.42
Upf3a-201ENSMUST00000043767 Brinp3Q499E0 766 aa30.19■■■□□ 2.42
Upf3a-201ENSMUST00000043767 Wnk3Q80XP9 1757 aa30.19■■■□□ 2.42
Upf3a-201ENSMUST00000043767 Zfp444Q3TDV8 331 aaKnown RBP30.18■■■□□ 2.42
Upf3a-201ENSMUST00000043767 Rtl5Q5DTT4 599 aa30.18■■■□□ 2.42
Upf3a-201ENSMUST00000043767 Uhrf1bp1lA2RSJ4 1457 aa30.17■■■□□ 2.42
Upf3a-201ENSMUST00000043767 Ppp1r15aP17564 657 aa30.16■■■□□ 2.42
Upf3a-201ENSMUST00000043767 Cabp4Q8VHC5 271 aa30.16■■■□□ 2.42
Upf3a-201ENSMUST00000043767 FancaQ9JL70 1439 aa30.14■■■□□ 2.42
Upf3a-201ENSMUST00000043767 Map4k4P97820 1233 aaKnown RBP30.12■■■□□ 2.41
Upf3a-201ENSMUST00000043767 TimelessQ9R1X4 1197 aa30.12■■■□□ 2.41
Upf3a-201ENSMUST00000043767 Eif5bQ05D44 1216 aaKnown RBP30.11■■■□□ 2.41
Upf3a-201ENSMUST00000043767 Apaf1O88879 1249 aa30.11■■■□□ 2.41
Upf3a-201ENSMUST00000043767 Map2P20357 1828 aa30.11■■■□□ 2.41
Upf3a-201ENSMUST00000043767 Uspl1Q3ULM6 1089 aa30.1■■■□□ 2.41
Upf3a-201ENSMUST00000043767 PalmQ9Z0P4 383 aa30.1■■■□□ 2.41
Upf3a-201ENSMUST00000043767 Nolc1E9Q5C9 702 aaKnown RBP30.1■■■□□ 2.41
Upf3a-201ENSMUST00000043767 Scn7aB1AYL1 1681 aa30.09■■■□□ 2.41
Upf3a-201ENSMUST00000043767 Mdc1Q5PSV9 1707 aa30.09■■■□□ 2.41
Upf3a-201ENSMUST00000043767 Ecm2Q5FW85 670 aa30.08■■■□□ 2.41
Upf3a-201ENSMUST00000043767 Rsph6aQ8CDR2 708 aa30.08■■■□□ 2.41
Upf3a-201ENSMUST00000043767 Ncapd2Q8K2Z4 1392 aa30.07■■■□□ 2.4
Upf3a-201ENSMUST00000043767 Ncoa4Q5U4H9 625 aa30.05■■■□□ 2.4
Upf3a-201ENSMUST00000043767 Eif4a2P10630 407 aa30.05■■■□□ 2.4
Upf3a-201ENSMUST00000043767 Gimap6Q8K349 305 aa30.05■■■□□ 2.4
Upf3a-201ENSMUST00000043767 Speer4f1Q9D5Q6 258 aa30.04■■■□□ 2.4
Upf3a-201ENSMUST00000043767 Neurod2Q62414 383 aa30■■■□□ 2.39
Upf3a-201ENSMUST00000043767 Ano8Q6PB70 1060 aa30■■■□□ 2.39
Upf3a-201ENSMUST00000043767 Dixdc1Q80Y83 711 aa29.99■■■□□ 2.39
Upf3a-201ENSMUST00000043767 Tmem132eQ6IEE6 982 aa29.97■■■□□ 2.39
Upf3a-201ENSMUST00000043767 Dzip1Q8BMD2 852 aa29.97■■■□□ 2.39
Upf3a-201ENSMUST00000043767 PtprvP70289 1705 aa29.96■■■□□ 2.39
Upf3a-201ENSMUST00000043767 Nfat5Q9WV30 1534 aa29.96■■■□□ 2.39
Upf3a-201ENSMUST00000043767 Mcm10Q0VBD2 885 aa29.95■■■□□ 2.39
Upf3a-201ENSMUST00000043767 DccP70211 1447 aa29.95■■■□□ 2.39
Upf3a-201ENSMUST00000043767 Hoxc9P09633 260 aa29.95■■■□□ 2.38
Upf3a-201ENSMUST00000043767 MpripP97434 1024 aa29.95■■■□□ 2.38
Upf3a-201ENSMUST00000043767 Mapk8ip3Q9ESN9 1337 aa29.94■■■□□ 2.38
Upf3a-201ENSMUST00000043767 Q4VA45 678 aa29.94■■■□□ 2.38
Upf3a-201ENSMUST00000043767 Fam135bQ9DAI6 1403 aa29.94■■■□□ 2.38
Upf3a-201ENSMUST00000043767 L3mbtl2P59178 703 aa29.93■■■□□ 2.38
Upf3a-201ENSMUST00000043767 Fchsd2Q3USJ8 740 aa29.93■■■□□ 2.38
Upf3a-201ENSMUST00000043767 Kif24Q6NWW5 1356 aa29.93■■■□□ 2.38
Upf3a-201ENSMUST00000043767 Ccne1Q61457 408 aa29.92■■■□□ 2.38
Upf3a-201ENSMUST00000043767 Plin1Q8CGN5 517 aa29.92■■■□□ 2.38
Upf3a-201ENSMUST00000043767 TatQ8QZR1 454 aa29.92■■■□□ 2.38
Upf3a-201ENSMUST00000043767 Dnajc10Q9DC23 793 aa29.92■■■□□ 2.38
Upf3a-201ENSMUST00000043767 Kcnh5Q920E3 988 aa29.91■■■□□ 2.38
Upf3a-201ENSMUST00000043767 Parp14Q2EMV9 1817 aa29.91■■■□□ 2.38
Upf3a-201ENSMUST00000043767 PaskQ8CEE6 1383 aa29.91■■■□□ 2.38
Upf3a-201ENSMUST00000043767 Wdr43Q6ZQL4 677 aaKnown RBP29.91■■■□□ 2.38
Upf3a-201ENSMUST00000043767 Supt16hQ920B9 1047 aa29.91■■■□□ 2.38
Upf3a-201ENSMUST00000043767 Atxn3Q9CVD2 355 aa29.91■■■□□ 2.38
Upf3a-201ENSMUST00000043767 Ccdc30Q8BVF4 654 aa29.9■■■□□ 2.38
Upf3a-201ENSMUST00000043767 Scaf1Q5U4C3 1256 aaKnown RBP29.89■■■□□ 2.38
Upf3a-201ENSMUST00000043767 Spef2Q8C9J3 1734 aa29.89■■■□□ 2.38
Retrieved 100 of 22,080 RNA–protein pairs in 18 ms