RNA–Protein interactions for RNA: ENSMUST00000029838.10

Rpf1-201, Transcript of Ribosome production factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rpf1, Length 1,661 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf1-201ENSMUST00000029838 Thsd7aQ69ZU6 1645 aa22.31■■□□□ 1.16
Rpf1-201ENSMUST00000029838 Unc13bQ9Z1N9 1602 aa22.31■■□□□ 1.16
Rpf1-201ENSMUST00000029838 Usp19Q3UJD6 1360 aa22.31■■□□□ 1.16
Rpf1-201ENSMUST00000029838 Trim28Q62318 834 aa22.31■■□□□ 1.16
Rpf1-201ENSMUST00000029838 Ncbp3Q8BZR9 615 aaKnown RBP22.31■■□□□ 1.16
Rpf1-201ENSMUST00000029838 Birc3O08863 600 aa22.3■■□□□ 1.16
Rpf1-201ENSMUST00000029838 Ppp1r15aP17564 657 aa22.3■■□□□ 1.16
Rpf1-201ENSMUST00000029838 Idi1P58044 227 aa22.3■■□□□ 1.16
Rpf1-201ENSMUST00000029838 Ciz1Q8VEH2 845 aa22.3■■□□□ 1.16
Rpf1-201ENSMUST00000029838 Col14a1Q80X19 1797 aa22.29■■□□□ 1.16
Rpf1-201ENSMUST00000029838 Sox12Q04890 314 aa22.28■■□□□ 1.16
Rpf1-201ENSMUST00000029838 Scaf1Q5U4C3 1256 aaKnown RBP22.28■■□□□ 1.16
Rpf1-201ENSMUST00000029838 L3mbtl2P59178 703 aa22.26■■□□□ 1.15
Rpf1-201ENSMUST00000029838 Fchsd2Q3USJ8 740 aa22.26■■□□□ 1.15
Rpf1-201ENSMUST00000029838 Zfp777B9EKF4 885 aa22.26■■□□□ 1.15
Rpf1-201ENSMUST00000029838 Mapk8ip3Q9ESN9 1337 aa22.25■■□□□ 1.15
Rpf1-201ENSMUST00000029838 CemipQ8BI06 1361 aa22.24■■□□□ 1.15
Rpf1-201ENSMUST00000029838 Brwd3A2AHJ4 1799 aa22.23■■□□□ 1.15
Rpf1-201ENSMUST00000029838 C3P01027 1663 aa22.23■■□□□ 1.15
Rpf1-201ENSMUST00000029838 Ttc41Q692V3 1318 aa22.22■■□□□ 1.15
Rpf1-201ENSMUST00000029838 Neurod2Q62414 383 aa22.22■■□□□ 1.15
Rpf1-201ENSMUST00000029838 Ccdc30Q8BVF4 654 aa22.22■■□□□ 1.15
Rpf1-201ENSMUST00000029838 Slc12a5Q91V14 1138 aa22.22■■□□□ 1.15
Rpf1-201ENSMUST00000029838 Chd4Q6PDQ2 1915 aaKnown RBP22.22■■□□□ 1.15
Rpf1-201ENSMUST00000029838 NalcnQ8BXR5 1738 aa22.22■■□□□ 1.15
Rpf1-201ENSMUST00000029838 Rapgef3Q8VCC8 918 aa22.2■■□□□ 1.15
Rpf1-201ENSMUST00000029838 Mdc1Q5PSV9 1707 aa22.2■■□□□ 1.14
Rpf1-201ENSMUST00000029838 Cdk12Q14AX6 1484 aaKnown RBP22.19■■□□□ 1.14
Rpf1-201ENSMUST00000029838 Fam135bQ9DAI6 1403 aa22.19■■□□□ 1.14
Rpf1-201ENSMUST00000029838 Znf541Q0GGX2 1363 aa22.18■■□□□ 1.14
Rpf1-201ENSMUST00000029838 Plekhh1Q80TI1 1356 aa22.18■■□□□ 1.14
Rpf1-201ENSMUST00000029838 Frmpd2A0A140LI67 1392 aa22.18■■□□□ 1.14
Rpf1-201ENSMUST00000029838 Aplp2Q06335 707 aa22.17■■□□□ 1.14
Rpf1-201ENSMUST00000029838 Dennd6aQ8BH65 605 aa22.17■■□□□ 1.14
Rpf1-201ENSMUST00000029838 Tmem2Q5FWI3 1383 aa22.17■■□□□ 1.14
Rpf1-201ENSMUST00000029838 Apaf1O88879 1249 aa22.17■■□□□ 1.14
Rpf1-201ENSMUST00000029838 Rad17Q6NXW6 688 aa22.17■■□□□ 1.14
Rpf1-201ENSMUST00000029838 Col16a1Q8BLX7 1580 aa22.16■■□□□ 1.14
Rpf1-201ENSMUST00000029838 Cavin4A2AMM0 362 aa22.16■■□□□ 1.14
Rpf1-201ENSMUST00000029838 Slain2Q8CI08 581 aa22.16■■□□□ 1.14
Rpf1-201ENSMUST00000029838 PalmQ9Z0P4 383 aa22.15■■□□□ 1.14
Rpf1-201ENSMUST00000029838 Tcerg1Q8CGF7 1100 aaKnown RBP22.14■■□□□ 1.14
Rpf1-201ENSMUST00000029838 Pik3c2aQ61194 1686 aa22.14■■□□□ 1.13
Rpf1-201ENSMUST00000029838 Gimap6Q8K349 305 aa22.13■■□□□ 1.13
Rpf1-201ENSMUST00000029838 PaskQ8CEE6 1383 aa22.12■■□□□ 1.13
Rpf1-201ENSMUST00000029838 Erbb3Q61526 1339 aa22.12■■□□□ 1.13
Rpf1-201ENSMUST00000029838 Rsph6aQ8CDR2 708 aa22.12■■□□□ 1.13
Rpf1-201ENSMUST00000029838 Rwdd1Q9CQK7 243 aa22.12■■□□□ 1.13
Rpf1-201ENSMUST00000029838 Iqcf3Q9D498 203 aa22.12■■□□□ 1.13
Rpf1-201ENSMUST00000029838 Gm21190A0A0G2JGJ6 266 aa22.11■■□□□ 1.13
Rpf1-201ENSMUST00000029838 Cabp4Q8VHC5 271 aa22.11■■□□□ 1.13
Rpf1-201ENSMUST00000029838 Sipa1l2Q80TE4 1722 aa22.11■■□□□ 1.13
Rpf1-201ENSMUST00000029838 Nlgn1Q99K10 843 aa22.11■■□□□ 1.13
Rpf1-201ENSMUST00000029838 Uhrf1bp1lA2RSJ4 1457 aa22.1■■□□□ 1.13
Rpf1-201ENSMUST00000029838 Fyb1O35601 819 aa22.1■■□□□ 1.13
Rpf1-201ENSMUST00000029838 NeflP08551 543 aa22.1■■□□□ 1.13
Rpf1-201ENSMUST00000029838 Scn4aQ9ER60 1841 aa22.09■■□□□ 1.13
Rpf1-201ENSMUST00000029838 Evi5lH3BKQ3 813 aa22.09■■□□□ 1.13
Rpf1-201ENSMUST00000029838 Dusp27Q148W8 1138 aa22.09■■□□□ 1.13
Rpf1-201ENSMUST00000029838 Swt1Q9DBQ9 907 aa22.08■■□□□ 1.13
Rpf1-201ENSMUST00000029838 Ubr1O70481 1757 aa22.08■■□□□ 1.12
Rpf1-201ENSMUST00000029838 Spef2Q8C9J3 1734 aa22.08■■□□□ 1.12
Rpf1-201ENSMUST00000029838 Atf3Q60765 181 aa22.07■■□□□ 1.12
Rpf1-201ENSMUST00000029838 Uhrf1bp1B2KF50 1429 aa22.07■■□□□ 1.12
Rpf1-201ENSMUST00000029838 Ncoa4Q5U4H9 625 aa22.07■■□□□ 1.12
Rpf1-201ENSMUST00000029838 Kcna6Q61923 529 aa22.07■■□□□ 1.12
Rpf1-201ENSMUST00000029838 Pip4k2bQ80XI4 416 aa22.07■■□□□ 1.12
Rpf1-201ENSMUST00000029838 Col18a1P39061 1774 aa22.06■■□□□ 1.12
Rpf1-201ENSMUST00000029838 TimelessQ9R1X4 1197 aa22.06■■□□□ 1.12
Rpf1-201ENSMUST00000029838 Mbd3Q9Z2D8 285 aaKnown RBP22.06■■□□□ 1.12
Rpf1-201ENSMUST00000029838 Wdr17E9Q271 1322 aa22.05■■□□□ 1.12
Rpf1-201ENSMUST00000029838 Ano8Q6PB70 1060 aa22.05■■□□□ 1.12
Rpf1-201ENSMUST00000029838 Camta1A2A891 1682 aa22.05■■□□□ 1.12
Rpf1-201ENSMUST00000029838 Scn7aB1AYL1 1681 aa22.05■■□□□ 1.12
Rpf1-201ENSMUST00000029838 Eif4a2P10630 407 aa22.04■■□□□ 1.12
Rpf1-201ENSMUST00000029838 Q4VA45 678 aa22.04■■□□□ 1.12
Rpf1-201ENSMUST00000029838 Map2P20357 1828 aa22.04■■□□□ 1.12
Rpf1-201ENSMUST00000029838 Farp2Q91VS8 1065 aa22.03■■□□□ 1.12
Rpf1-201ENSMUST00000029838 Ncapd2Q8K2Z4 1392 aa22.02■■□□□ 1.12
Rpf1-201ENSMUST00000029838 NudcO35685 332 aaKnown RBP22.02■■□□□ 1.12
Rpf1-201ENSMUST00000029838 Ccar1Q8CH18 1146 aaKnown RBP22.02■■□□□ 1.12
Rpf1-201ENSMUST00000029838 SafbD3YXK2 937 aaKnown RBP22.01■■□□□ 1.11
Rpf1-201ENSMUST00000029838 Kcnh5Q920E3 988 aa22.01■■□□□ 1.11
Rpf1-201ENSMUST00000029838 Stk31Q99MW1 1018 aa22.01■■□□□ 1.11
Rpf1-201ENSMUST00000029838 Slc35g1Q8BY79 368 aa22.01■■□□□ 1.11
Rpf1-201ENSMUST00000029838 Rab11fip3Q8CHD8 1047 aa22.01■■□□□ 1.11
Rpf1-201ENSMUST00000029838 Atxn3Q9CVD2 355 aa22.01■■□□□ 1.11
Rpf1-201ENSMUST00000029838 Wnk3Q80XP9 1757 aa22■■□□□ 1.11
Rpf1-201ENSMUST00000029838 Ksr2Q3UVC0 959 aa22■■□□□ 1.11
Rpf1-201ENSMUST00000029838 FancaQ9JL70 1439 aa22■■□□□ 1.11
Rpf1-201ENSMUST00000029838 Ltbp4Q8K4G1 1666 aa21.97■■□□□ 1.11
Rpf1-201ENSMUST00000029838 Atp7bQ64446 1462 aa21.96■■□□□ 1.11
Rpf1-201ENSMUST00000029838 MpripP97434 1024 aa21.96■■□□□ 1.11
Rpf1-201ENSMUST00000029838 Nckap5lQ6GQX2 1323 aa21.94■■□□□ 1.1
Rpf1-201ENSMUST00000029838 Hoxc9P09633 260 aa21.94■■□□□ 1.1
Rpf1-201ENSMUST00000029838 TatQ8QZR1 454 aa21.94■■□□□ 1.1
Rpf1-201ENSMUST00000029838 Ttc21aQ8C0S4 1314 aa21.93■■□□□ 1.1
Rpf1-201ENSMUST00000029838 Fmnl2A2APV2 1086 aa21.93■■□□□ 1.1
Rpf1-201ENSMUST00000029838 TnikP83510 1323 aa21.92■■□□□ 1.1
Rpf1-201ENSMUST00000029838 Gnai1B2RSH2 354 aa21.91■■□□□ 1.1
Retrieved 100 of 22,080 RNA–protein pairs in 18.9 ms