RNA–Protein interactions for RNA: ENSMUST00000029222.7

Ccdc39-201, Transcript of Coiled-coil domain-containing protein 39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc39, Length 3,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39-201ENSMUST00000029222 Atf7ipQ7TT18 1306 aa10.02□□□□□ -0.81
Ccdc39-201ENSMUST00000029222 Usp16Q99LG0 825 aa10.02□□□□□ -0.81
Ccdc39-201ENSMUST00000029222 PtprmP28828 1452 aa10.01□□□□□ -0.81
Ccdc39-201ENSMUST00000029222 Tspyl2Q7TQI8 677 aa10.01□□□□□ -0.81
Ccdc39-201ENSMUST00000029222 Fgd1P52734 960 aa10.01□□□□□ -0.81
Ccdc39-201ENSMUST00000029222 Ccne1Q61457 408 aa10.01□□□□□ -0.81
Ccdc39-201ENSMUST00000029222 Tmem132eQ6IEE6 982 aa10.01□□□□□ -0.81
Ccdc39-201ENSMUST00000029222 Scaf11E9PZM7 1456 aaKnown RBP10.01□□□□□ -0.81
Ccdc39-201ENSMUST00000029222 Abca8aQ8K442 1620 aa10□□□□□ -0.81
Ccdc39-201ENSMUST00000029222 G3bp1P97855 465 aaKnown RBP10□□□□□ -0.81
Ccdc39-201ENSMUST00000029222 PzpQ61838 1495 aa10□□□□□ -0.81
Ccdc39-201ENSMUST00000029222 Ppp1r15aP17564 657 aa10□□□□□ -0.81
Ccdc39-201ENSMUST00000029222 Q3TQI7 289 aaKnown RBP10□□□□□ -0.81
Ccdc39-201ENSMUST00000029222 Arhgap23Q69ZH9 1483 aa9.99□□□□□ -0.81
Ccdc39-201ENSMUST00000029222 Ggnbp2Q5SV77 696 aa9.99□□□□□ -0.81
Ccdc39-201ENSMUST00000029222 Nckap5lQ6GQX2 1323 aa9.99□□□□□ -0.81
Ccdc39-201ENSMUST00000029222 Kank1E9Q238 1360 aa9.99□□□□□ -0.81
Ccdc39-201ENSMUST00000029222 Mbd3Q9Z2D8 285 aaKnown RBP9.99□□□□□ -0.81
Ccdc39-201ENSMUST00000029222 TnikP83510 1323 aa9.98□□□□□ -0.81
Ccdc39-201ENSMUST00000029222 Slc35g1Q8BY79 368 aa9.98□□□□□ -0.81
Ccdc39-201ENSMUST00000029222 Gprasp1Q5U4C1 1347 aa9.98□□□□□ -0.81
Ccdc39-201ENSMUST00000029222 Tmem131lQ3U3D7 1597 aa9.98□□□□□ -0.81
Ccdc39-201ENSMUST00000029222 Trim58Q5NCC9 485 aa9.98□□□□□ -0.81
Ccdc39-201ENSMUST00000029222 Klhdc4Q921I2 584 aa9.98□□□□□ -0.81
Ccdc39-201ENSMUST00000029222 Ddx17Q501J6 650 aaKnown RBP9.97□□□□□ -0.81
Ccdc39-201ENSMUST00000029222 Qser1A2BIE1 1698 aa9.97□□□□□ -0.81
Ccdc39-201ENSMUST00000029222 Eif4a2P10630 407 aa9.97□□□□□ -0.81
Ccdc39-201ENSMUST00000029222 TmpoQ61033 693 aaKnown RBP9.97□□□□□ -0.81
Ccdc39-201ENSMUST00000029222 Pak3Q61036 559 aa9.97□□□□□ -0.81
Ccdc39-201ENSMUST00000029222 Frmpd2A0A140LI67 1392 aa9.97□□□□□ -0.81
Ccdc39-201ENSMUST00000029222 Setd1aE9PYH6 1716 aa9.97□□□□□ -0.81
Ccdc39-201ENSMUST00000029222 Ehbp1l1Q99MS7 1716 aa9.96□□□□□ -0.81
Ccdc39-201ENSMUST00000029222 Rsph6aQ8CDR2 708 aa9.96□□□□□ -0.81
Ccdc39-201ENSMUST00000029222 Prkrip1Q9CWV6 186 aaKnown RBP9.96□□□□□ -0.81
Ccdc39-201ENSMUST00000029222 Slain2Q8CI08 581 aa9.96□□□□□ -0.81
Ccdc39-201ENSMUST00000029222 Kdm5aQ3UXZ9 1690 aa9.96□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Usp19Q3UJD6 1360 aa9.96□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Gnai1B2RSH2 354 aa9.95□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Gnai3Q9DC51 354 aa9.95□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Ino80Q6ZPV2 1559 aa9.95□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Zfp777B9EKF4 885 aa9.95□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Gm10471E9Q1C7 252 aa9.95□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Fchsd2Q3USJ8 740 aa9.95□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Cdc37l1Q9CZP7 335 aa9.95□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Aplp1Q03157 653 aa9.95□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Cyb5rlB1AS42 316 aa9.94□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Cc2d1aQ8K1A6 943 aa9.94□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Nlgn1Q99K10 843 aa9.94□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Plekhg1F6S200 1446 aa9.94□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Snap23O09044 210 aa9.94□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Ciz1Q8VEH2 845 aa9.94□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Bcl11bQ99PV8 884 aa9.94□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Adamts7Q68SA9 1657 aa9.94□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Gm21698A0A087WQP8 267 aa9.93□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Gm21671G3UY31 267 aa9.93□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Bcl2l13P59017 434 aa9.93□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Acsbg1Q99PU5 721 aa9.93□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Med14A2ABV5 1459 aaKnown RBP9.93□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Farp2Q91VS8 1065 aa9.93□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 EspnQ9ET47 871 aa9.93□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Itsn2Q9Z0R6 1659 aa9.92□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Cul9Q80TT8 1865 aa9.92□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Zranb3Q6NZP1 1069 aa9.92□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Amotl2Q8K371 772 aa9.92□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Fmnl2A2APV2 1086 aa9.92□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Ttll13A4Q9F6 804 aa9.92□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 HypkQ9CR41 129 aa9.92□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Dnajc10Q9DC23 793 aa9.92□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Cdk5rap2Q8K389 1822 aa9.92□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Plxnc1Q9QZC2 1574 aa9.91□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Eya1P97767 591 aa9.91□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Trim28Q62318 834 aa9.91□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Dixdc1Q80Y83 711 aa9.91□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Ric3Q8BPM6 367 aa9.91□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Gimap6Q8K349 305 aa9.91□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Ppp1r3fQ9JIG4 799 aa9.91□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Uhrf1bp1lA2RSJ4 1457 aa9.91□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 TimelessQ9R1X4 1197 aa9.91□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 CastP51125 788 aa9.9□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Prim1P20664 417 aa9.9□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 CanxP35564 591 aaKnown RBP9.9□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Ggt6Q6PDE7 497 aa9.9□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Dzip1Q8BMD2 852 aa9.9□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 4930407I10RikD3Z5T8 1512 aa9.9□□□□□ -0.82
Ccdc39-201ENSMUST00000029222 Maco1Q7TQE6 664 aaKnown RBP9.9□□□□□ -0.83
Ccdc39-201ENSMUST00000029222 Trpm1Q2TV84 1622 aa9.9□□□□□ -0.83
Ccdc39-201ENSMUST00000029222 Hsp90ab1P11499 724 aaKnown RBP9.89□□□□□ -0.83
Ccdc39-201ENSMUST00000029222 Plekhm2Q80TQ5 1018 aa9.89□□□□□ -0.83
Ccdc39-201ENSMUST00000029222 Sirt1Q923E4 737 aa9.89□□□□□ -0.83
Ccdc39-201ENSMUST00000029222 Hoxb7P09024 217 aa9.89□□□□□ -0.83
Ccdc39-201ENSMUST00000029222 Myt1Q8CFC2 1127 aa9.89□□□□□ -0.83
Ccdc39-201ENSMUST00000029222 Rapgef3Q8VCC8 918 aa9.89□□□□□ -0.83
Ccdc39-201ENSMUST00000029222 Fam50bQ9WTJ8 334 aa9.89□□□□□ -0.83
Ccdc39-201ENSMUST00000029222 Triml2E9PW10 424 aa9.88□□□□□ -0.83
Ccdc39-201ENSMUST00000029222 HdgfP51859 237 aaKnown RBP9.88□□□□□ -0.83
Ccdc39-201ENSMUST00000029222 Ddx54Q8K4L0 874 aaKnown RBP9.88□□□□□ -0.83
Ccdc39-201ENSMUST00000029222 Astn2Q80Z10 1352 aa9.88□□□□□ -0.83
Ccdc39-201ENSMUST00000029222 Hoxc9P09633 260 aa9.87□□□□□ -0.83
Ccdc39-201ENSMUST00000029222 ChgaP26339 463 aaKnown RBP9.87□□□□□ -0.83
Ccdc39-201ENSMUST00000029222 Rtn4Q99P72 1162 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms