Protein–RNA interactions for Protein: Q8K442

Abca8a, ATP-binding cassette sub-family A member 8-A, mousemouse

Predictions only

Length 1,620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca8aQ8K442 Gm25239-201ENSMUST00000174915 86 ntBASIC56,12■■■■■ 6,57
Abca8aQ8K442 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC52,09■■■■■ 5,93
Abca8aQ8K442 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC50,96■■■■■ 5,75
Abca8aQ8K442 Gm24109-201ENSMUST00000175489 103 ntBASIC48,94■■■■■ 5,43
Abca8aQ8K442 Gm15042-201ENSMUST00000120212 883 ntBASIC48,93■■■■■ 5,42
Abca8aQ8K442 Gm15045-201ENSMUST00000117359 883 ntBASIC48,07■■■■■ 5,29
Abca8aQ8K442 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC47,43■■■■■ 5,18
Abca8aQ8K442 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC47,33■■■■■ 5,17
Abca8aQ8K442 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC47,1■■■■■ 5,13
Abca8aQ8K442 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC46,84■■■■■ 5,09
Abca8aQ8K442 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC46,79■■■■■ 5,08
Abca8aQ8K442 Gm23366-201ENSMUST00000175022 89 ntBASIC46,75■■■■■ 5,07
Abca8aQ8K442 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC46,27■■■■■ 5
Abca8aQ8K442 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC45,49■■■■■ 4,87
Abca8aQ8K442 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC45,47■■■■■ 4,87
Abca8aQ8K442 AC153911.1-202ENSMUST00000218534 1034 ntBASIC45,46■■■■■ 4,87
Abca8aQ8K442 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC45,18■■■■■ 4,82
Abca8aQ8K442 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC44,9■■■■■ 4,78
Abca8aQ8K442 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC44,9■■■■■ 4,78
Abca8aQ8K442 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC44,86■■■■■ 4,77
Abca8aQ8K442 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC44,79■■■■■ 4,76
Abca8aQ8K442 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC44,78■■■■■ 4,76
Abca8aQ8K442 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC44,76■■■■■ 4,76
Abca8aQ8K442 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC44,56■■■■■ 4,72
Abca8aQ8K442 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC44,53■■■■■ 4,72
Abca8aQ8K442 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC44,47■■■■■ 4,71
Abca8aQ8K442 Gm25238-201ENSMUST00000174914 89 ntBASIC44,34■■■■■ 4,69
Abca8aQ8K442 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC44,27■■■■■ 4,68
Abca8aQ8K442 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC44,22■■■■■ 4,67
Abca8aQ8K442 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC44,22■■■■■ 4,67
Abca8aQ8K442 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC44,21■■■■■ 4,67
Abca8aQ8K442 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC44,2■■■■■ 4,67
Abca8aQ8K442 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC44,04■■■■■ 4,64
Abca8aQ8K442 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC43,79■■■■■ 4,6
Abca8aQ8K442 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC43,55■■■■■ 4,56
Abca8aQ8K442 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC43,49■■■■■ 4,55
Abca8aQ8K442 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC43,39■■■■■ 4,54
Abca8aQ8K442 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC43,23■■■■■ 4,51
Abca8aQ8K442 Psd-208ENSMUST00000224556 2034 ntBASIC43,18■■■■■ 4,5
Abca8aQ8K442 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC43,13■■■■■ 4,49
Abca8aQ8K442 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC42,99■■■■■ 4,47
Abca8aQ8K442 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC42,94■■■■■ 4,46
Abca8aQ8K442 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC42,89■■■■■ 4,46
Abca8aQ8K442 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC42,89■■■■■ 4,46
Abca8aQ8K442 Gm27325-201ENSMUST00000175467 74 ntBASIC42,81■■■■■ 4,44
Abca8aQ8K442 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC42,67■■■■■ 4,42
Abca8aQ8K442 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC42,47■■■■■ 4,39
Abca8aQ8K442 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC42,39■■■■■ 4,38
Abca8aQ8K442 Gm25262-201ENSMUST00000174934 133 ntBASIC42,34■■■■■ 4,37
Abca8aQ8K442 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC42,29■■■■■ 4,36
Abca8aQ8K442 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC42,22■■■■■ 4,35
Abca8aQ8K442 Rab21-202ENSMUST00000218831 843 ntBASIC42,12■■■■■ 4,33
Abca8aQ8K442 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC42,04■■■■■ 4,32
Abca8aQ8K442 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC42■■■■■ 4,31
Abca8aQ8K442 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC41,99■■■■■ 4,31
Abca8aQ8K442 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC41,92■■■■■ 4,3
Abca8aQ8K442 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC41,89■■■■■ 4,3
Abca8aQ8K442 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC41,89■■■■■ 4,3
Abca8aQ8K442 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC41,89■■■■■ 4,3
Abca8aQ8K442 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC41,89■■■■■ 4,3
Abca8aQ8K442 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC41,79■■■■■ 4,28
Abca8aQ8K442 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC41,77■■■■■ 4,28
Abca8aQ8K442 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC41,73■■■■■ 4,27
Abca8aQ8K442 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC41,73■■■■■ 4,27
Abca8aQ8K442 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC41,69■■■■■ 4,27
Abca8aQ8K442 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC41,66■■■■■ 4,26
Abca8aQ8K442 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC41,61■■■■■ 4,25
Abca8aQ8K442 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC41,57■■■■■ 4,24
Abca8aQ8K442 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC41,51■■■■■ 4,24
Abca8aQ8K442 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC41,48■■■■■ 4,23
Abca8aQ8K442 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC41,45■■■■■ 4,23
Abca8aQ8K442 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC41,44■■■■■ 4,22
Abca8aQ8K442 Gm26115-201ENSMUST00000175605 87 ntBASIC41,36■■■■■ 4,21
Abca8aQ8K442 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC41,33■■■■■ 4,21
Abca8aQ8K442 Gm8109-201ENSMUST00000194076 746 ntBASIC41,33■■■■■ 4,21
Abca8aQ8K442 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC41,29■■■■■ 4,2
Abca8aQ8K442 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC41,26■■■■■ 4,19
Abca8aQ8K442 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC41,23■■■■■ 4,19
Abca8aQ8K442 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC41,22■■■■■ 4,19
Abca8aQ8K442 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC41,11■■■■■ 4,17
Abca8aQ8K442 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC41,09■■■■■ 4,17
Abca8aQ8K442 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC41,04■■■■■ 4,16
Abca8aQ8K442 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC41,02■■■■■ 4,16
Abca8aQ8K442 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC40,99■■■■■ 4,15
Abca8aQ8K442 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC40,98■■■■■ 4,15
Abca8aQ8K442 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC40,95■■■■■ 4,15
Abca8aQ8K442 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC40,93■■■■■ 4,14
Abca8aQ8K442 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC40,93■■■■■ 4,14
Abca8aQ8K442 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC40,89■■■■■ 4,14
Abca8aQ8K442 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC40,89■■■■■ 4,14
Abca8aQ8K442 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC40,83■■■■■ 4,13
Abca8aQ8K442 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC40,81■■■■■ 4,12
Abca8aQ8K442 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC40,8■■■■■ 4,12
Abca8aQ8K442 Gm17082-201ENSMUST00000166043 1091 ntBASIC40,8■■■■■ 4,12
Abca8aQ8K442 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC40,7■■■■■ 4,11
Abca8aQ8K442 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC40,64■■■■■ 4,1
Abca8aQ8K442 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC40,62■■■■■ 4,09
Abca8aQ8K442 Gm10524-201ENSMUST00000181931 1893 ntBASIC40,57■■■■■ 4,09
Abca8aQ8K442 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC40,56■■■■■ 4,08
Abca8aQ8K442 Gm42596-201ENSMUST00000196305 1958 ntBASIC40,55■■■■■ 4,08
Retrieved 100 of 76,532 protein–RNA pairs in 9,2 ms