Protein–RNA interactions for Protein: Q8K442

Abca8a, ATP-binding cassette sub-family A member 8-A, mousemouse

Predictions only

Length 1,620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca8aQ8K442 Gm25239-201ENSMUST00000174915 86 ntBASIC56.12■■■■■ 6.57
Abca8aQ8K442 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC52.09■■■■■ 5.93
Abca8aQ8K442 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC50.96■■■■■ 5.75
Abca8aQ8K442 Gm24109-201ENSMUST00000175489 103 ntBASIC48.94■■■■■ 5.43
Abca8aQ8K442 Gm15042-201ENSMUST00000120212 883 ntBASIC48.93■■■■■ 5.42
Abca8aQ8K442 Gm15045-201ENSMUST00000117359 883 ntBASIC48.07■■■■■ 5.29
Abca8aQ8K442 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC47.43■■■■■ 5.18
Abca8aQ8K442 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC47.33■■■■■ 5.17
Abca8aQ8K442 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC47.1■■■■■ 5.13
Abca8aQ8K442 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC46.84■■■■■ 5.09
Abca8aQ8K442 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC46.79■■■■■ 5.08
Abca8aQ8K442 Gm23366-201ENSMUST00000175022 89 ntBASIC46.75■■■■■ 5.07
Abca8aQ8K442 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC46.27■■■■■ 5
Abca8aQ8K442 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC45.49■■■■■ 4.87
Abca8aQ8K442 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC45.47■■■■■ 4.87
Abca8aQ8K442 AC153911.1-202ENSMUST00000218534 1034 ntBASIC45.46■■■■■ 4.87
Abca8aQ8K442 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC45.18■■■■■ 4.82
Abca8aQ8K442 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC44.9■■■■■ 4.78
Abca8aQ8K442 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC44.9■■■■■ 4.78
Abca8aQ8K442 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC44.86■■■■■ 4.77
Abca8aQ8K442 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC44.79■■■■■ 4.76
Abca8aQ8K442 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC44.78■■■■■ 4.76
Abca8aQ8K442 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC44.76■■■■■ 4.76
Abca8aQ8K442 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC44.56■■■■■ 4.72
Abca8aQ8K442 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC44.53■■■■■ 4.72
Abca8aQ8K442 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC44.47■■■■■ 4.71
Abca8aQ8K442 Gm25238-201ENSMUST00000174914 89 ntBASIC44.34■■■■■ 4.69
Abca8aQ8K442 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC44.27■■■■■ 4.68
Abca8aQ8K442 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC44.22■■■■■ 4.67
Abca8aQ8K442 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC44.22■■■■■ 4.67
Abca8aQ8K442 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC44.21■■■■■ 4.67
Abca8aQ8K442 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC44.2■■■■■ 4.67
Abca8aQ8K442 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC44.04■■■■■ 4.64
Abca8aQ8K442 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC43.79■■■■■ 4.6
Abca8aQ8K442 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC43.55■■■■■ 4.56
Abca8aQ8K442 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC43.49■■■■■ 4.55
Abca8aQ8K442 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC43.39■■■■■ 4.54
Abca8aQ8K442 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC43.23■■■■■ 4.51
Abca8aQ8K442 Psd-208ENSMUST00000224556 2034 ntBASIC43.18■■■■■ 4.5
Abca8aQ8K442 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC43.13■■■■■ 4.49
Abca8aQ8K442 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC42.99■■■■■ 4.47
Abca8aQ8K442 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC42.94■■■■■ 4.46
Abca8aQ8K442 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC42.89■■■■■ 4.46
Abca8aQ8K442 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC42.89■■■■■ 4.46
Abca8aQ8K442 Gm27325-201ENSMUST00000175467 74 ntBASIC42.81■■■■■ 4.44
Abca8aQ8K442 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC42.67■■■■■ 4.42
Abca8aQ8K442 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC42.47■■■■■ 4.39
Abca8aQ8K442 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC42.39■■■■■ 4.38
Abca8aQ8K442 Gm25262-201ENSMUST00000174934 133 ntBASIC42.34■■■■■ 4.37
Abca8aQ8K442 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC42.29■■■■■ 4.36
Abca8aQ8K442 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC42.22■■■■■ 4.35
Abca8aQ8K442 Rab21-202ENSMUST00000218831 843 ntBASIC42.12■■■■■ 4.33
Abca8aQ8K442 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC42.04■■■■■ 4.32
Abca8aQ8K442 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC42■■■■■ 4.31
Abca8aQ8K442 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC41.99■■■■■ 4.31
Abca8aQ8K442 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC41.92■■■■■ 4.3
Abca8aQ8K442 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC41.89■■■■■ 4.3
Abca8aQ8K442 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC41.89■■■■■ 4.3
Abca8aQ8K442 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC41.89■■■■■ 4.3
Abca8aQ8K442 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC41.89■■■■■ 4.3
Abca8aQ8K442 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC41.79■■■■■ 4.28
Abca8aQ8K442 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC41.77■■■■■ 4.28
Abca8aQ8K442 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC41.73■■■■■ 4.27
Abca8aQ8K442 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC41.73■■■■■ 4.27
Abca8aQ8K442 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC41.69■■■■■ 4.27
Abca8aQ8K442 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC41.66■■■■■ 4.26
Abca8aQ8K442 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC41.61■■■■■ 4.25
Abca8aQ8K442 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC41.57■■■■■ 4.24
Abca8aQ8K442 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC41.51■■■■■ 4.24
Abca8aQ8K442 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC41.48■■■■■ 4.23
Abca8aQ8K442 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC41.45■■■■■ 4.23
Abca8aQ8K442 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC41.44■■■■■ 4.22
Abca8aQ8K442 Gm26115-201ENSMUST00000175605 87 ntBASIC41.36■■■■■ 4.21
Abca8aQ8K442 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC41.33■■■■■ 4.21
Abca8aQ8K442 Gm8109-201ENSMUST00000194076 746 ntBASIC41.33■■■■■ 4.21
Abca8aQ8K442 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC41.29■■■■■ 4.2
Abca8aQ8K442 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC41.26■■■■■ 4.19
Abca8aQ8K442 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC41.23■■■■■ 4.19
Abca8aQ8K442 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC41.22■■■■■ 4.19
Abca8aQ8K442 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC41.11■■■■■ 4.17
Abca8aQ8K442 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC41.09■■■■■ 4.17
Abca8aQ8K442 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC41.04■■■■■ 4.16
Abca8aQ8K442 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC41.02■■■■■ 4.16
Abca8aQ8K442 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC40.99■■■■■ 4.15
Abca8aQ8K442 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC40.98■■■■■ 4.15
Abca8aQ8K442 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC40.95■■■■■ 4.15
Abca8aQ8K442 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC40.93■■■■■ 4.14
Abca8aQ8K442 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC40.93■■■■■ 4.14
Abca8aQ8K442 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC40.89■■■■■ 4.14
Abca8aQ8K442 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC40.89■■■■■ 4.14
Abca8aQ8K442 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC40.83■■■■■ 4.13
Abca8aQ8K442 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC40.81■■■■■ 4.12
Abca8aQ8K442 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC40.8■■■■■ 4.12
Abca8aQ8K442 Gm17082-201ENSMUST00000166043 1091 ntBASIC40.8■■■■■ 4.12
Abca8aQ8K442 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC40.7■■■■■ 4.11
Abca8aQ8K442 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC40.64■■■■■ 4.1
Abca8aQ8K442 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC40.62■■■■■ 4.09
Abca8aQ8K442 Gm10524-201ENSMUST00000181931 1893 ntBASIC40.57■■■■■ 4.09
Abca8aQ8K442 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC40.56■■■■■ 4.08
Abca8aQ8K442 Gm42596-201ENSMUST00000196305 1958 ntBASIC40.55■■■■■ 4.08
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms