RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Ppp2r3aB2RXC8 1150 aa23.52■■□□□ 1.36
Ccdc3-201ENSMUST00000027988 Qser1A2BIE1 1698 aa23.5■■□□□ 1.35
Ccdc3-201ENSMUST00000027988 AU019823E9PUQ3 292 aa23.5■■□□□ 1.35
Ccdc3-201ENSMUST00000027988 Gtf3c3Q3TMP1 882 aa23.5■■□□□ 1.35
Ccdc3-201ENSMUST00000027988 Znf330Q922H9 316 aa23.5■■□□□ 1.35
Ccdc3-201ENSMUST00000027988 PtprmP28828 1452 aa23.5■■□□□ 1.35
Ccdc3-201ENSMUST00000027988 NinlQ6ZQ12 1394 aa23.5■■□□□ 1.35
Ccdc3-201ENSMUST00000027988 Tmc1Q8R4P5 757 aa23.49■■□□□ 1.35
Ccdc3-201ENSMUST00000027988 Irx3P81067 507 aa23.48■■□□□ 1.35
Ccdc3-201ENSMUST00000027988 Q9D9H8 365 aa23.48■■□□□ 1.35
Ccdc3-201ENSMUST00000027988 CastP51125 788 aa23.47■■□□□ 1.35
Ccdc3-201ENSMUST00000027988 Arhgap23Q69ZH9 1483 aa23.47■■□□□ 1.35
Ccdc3-201ENSMUST00000027988 Ahdc1Q6PAL7 1594 aaKnown RBP23.45■■□□□ 1.34
Ccdc3-201ENSMUST00000027988 Pdlim2Q8R1G6 349 aa23.45■■□□□ 1.34
Ccdc3-201ENSMUST00000027988 Nutm1Q8BHP2 1126 aa23.44■■□□□ 1.34
Ccdc3-201ENSMUST00000027988 Senp3Q9EP97 568 aaKnown RBP23.44■■□□□ 1.34
Ccdc3-201ENSMUST00000027988 Adamts7Q68SA9 1657 aa23.43■■□□□ 1.34
Ccdc3-201ENSMUST00000027988 Cdk19Q8BWD8 501 aa23.43■■□□□ 1.34
Ccdc3-201ENSMUST00000027988 Slc12a5Q91V14 1138 aa23.43■■□□□ 1.34
Ccdc3-201ENSMUST00000027988 Maco1Q7TQE6 664 aaKnown RBP23.43■■□□□ 1.34
Ccdc3-201ENSMUST00000027988 Tnpo1Q8BFY9 898 aaKnown RBP23.43■■□□□ 1.34
Ccdc3-201ENSMUST00000027988 Atp2b2Q9R0K7 1198 aa23.43■■□□□ 1.34
Ccdc3-201ENSMUST00000027988 Ccdc60Q8C4J0 545 aa23.42■■□□□ 1.34
Ccdc3-201ENSMUST00000027988 Ankrd50F7BE84 1390 aa23.42■■□□□ 1.34
Ccdc3-201ENSMUST00000027988 Gm156Q58A37 223 aa23.42■■□□□ 1.34
Ccdc3-201ENSMUST00000027988 Sptbn5F6UCX4 1208 aa23.41■■□□□ 1.34
Ccdc3-201ENSMUST00000027988 Gsto1O09131 240 aa23.41■■□□□ 1.34
Ccdc3-201ENSMUST00000027988 Abca14E9Q8F8 1683 aa23.41■■□□□ 1.34
Ccdc3-201ENSMUST00000027988 Utp14aQ640M1 767 aaKnown RBP23.41■■□□□ 1.34
Ccdc3-201ENSMUST00000027988 Ttc21aQ8C0S4 1314 aa23.4■■□□□ 1.34
Ccdc3-201ENSMUST00000027988 Rbm25B2RY56 838 aaKnown RBP23.4■■□□□ 1.34
Ccdc3-201ENSMUST00000027988 Arhgef28P97433 1693 aa23.39■■□□□ 1.33
Ccdc3-201ENSMUST00000027988 PalmQ9Z0P4 383 aa23.39■■□□□ 1.33
Ccdc3-201ENSMUST00000027988 Cavin4A2AMM0 362 aa23.38■■□□□ 1.33
Ccdc3-201ENSMUST00000027988 Nectin2P32507 530 aa23.38■■□□□ 1.33
Ccdc3-201ENSMUST00000027988 Tbc1d32Q3URV1 1296 aa23.38■■□□□ 1.33
Ccdc3-201ENSMUST00000027988 Aplp1Q03157 653 aa23.37■■□□□ 1.33
Ccdc3-201ENSMUST00000027988 Q4VA45 678 aa23.37■■□□□ 1.33
Ccdc3-201ENSMUST00000027988 NktrP30415 1453 aa23.37■■□□□ 1.33
Ccdc3-201ENSMUST00000027988 Ncbp3Q8BZR9 615 aaKnown RBP23.36■■□□□ 1.33
Ccdc3-201ENSMUST00000027988 Asxl2Q8BZ32 1370 aa23.36■■□□□ 1.33
Ccdc3-201ENSMUST00000027988 CltcQ68FD5 1675 aaKnown RBP23.36■■□□□ 1.33
Ccdc3-201ENSMUST00000027988 Mfap1aC0HKD8 439 aaKnown RBP23.36■■□□□ 1.33
Ccdc3-201ENSMUST00000027988 Mfap1bC0HKD9 439 aaKnown RBP23.36■■□□□ 1.33
Ccdc3-201ENSMUST00000027988 Kif2cQ922S8 721 aa23.35■■□□□ 1.33
Ccdc3-201ENSMUST00000027988 Kif13aQ9EQW7 1749 aa23.35■■□□□ 1.33
Ccdc3-201ENSMUST00000027988 Atl3Q91YH5 541 aa23.34■■□□□ 1.33
Ccdc3-201ENSMUST00000027988 Phlpp2Q8BXA7 1320 aa23.34■■□□□ 1.33
Ccdc3-201ENSMUST00000027988 AampJ3QN89 436 aa23.34■■□□□ 1.33
Ccdc3-201ENSMUST00000027988 Uhrf1bp1B2KF50 1429 aa23.33■■□□□ 1.33
Ccdc3-201ENSMUST00000027988 Plcd4Q8K3R3 807 aa23.33■■□□□ 1.33
Ccdc3-201ENSMUST00000027988 Afap1Q80YS6 731 aa23.32■■□□□ 1.32
Ccdc3-201ENSMUST00000027988 Pik3r4Q8VD65 1358 aa23.31■■□□□ 1.32
Ccdc3-201ENSMUST00000027988 Rabep1O35551 862 aa23.31■■□□□ 1.32
Ccdc3-201ENSMUST00000027988 Znf316Q6PGE4 1016 aa23.31■■□□□ 1.32
Ccdc3-201ENSMUST00000027988 G3bp1P97855 465 aaKnown RBP23.3■■□□□ 1.32
Ccdc3-201ENSMUST00000027988 Tmco5bQ80X59 307 aa23.3■■□□□ 1.32
Ccdc3-201ENSMUST00000027988 Birc3O08863 600 aa23.29■■□□□ 1.32
Ccdc3-201ENSMUST00000027988 Trim28Q62318 834 aa23.28■■□□□ 1.32
Ccdc3-201ENSMUST00000027988 Map3k19E9Q3S4 1311 aa23.28■■□□□ 1.32
Ccdc3-201ENSMUST00000027988 Naip7Q9JIB3 1402 aa23.28■■□□□ 1.32
Ccdc3-201ENSMUST00000027988 Itsn1Q9Z0R4 1714 aa23.28■■□□□ 1.32
Ccdc3-201ENSMUST00000027988 Kif18aQ91WD7 886 aa23.27■■□□□ 1.32
Ccdc3-201ENSMUST00000027988 Cog6Q8R3I3 657 aa23.27■■□□□ 1.32
Ccdc3-201ENSMUST00000027988 Swt1Q9DBQ9 907 aa23.27■■□□□ 1.32
Ccdc3-201ENSMUST00000027988 Mcm10Q0VBD2 885 aa23.26■■□□□ 1.31
Ccdc3-201ENSMUST00000027988 Spryd3E9Q9B3 442 aa23.26■■□□□ 1.31
Ccdc3-201ENSMUST00000027988 Nsd3Q6P2L6 1439 aa23.26■■□□□ 1.31
Ccdc3-201ENSMUST00000027988 PaskQ8CEE6 1383 aa23.26■■□□□ 1.31
Ccdc3-201ENSMUST00000027988 Catsper2A2ARP9 588 aa23.26■■□□□ 1.31
Ccdc3-201ENSMUST00000027988 Usp32F8VPZ3 1604 aa23.25■■□□□ 1.31
Ccdc3-201ENSMUST00000027988 Plekhm2Q80TQ5 1018 aa23.25■■□□□ 1.31
Ccdc3-201ENSMUST00000027988 Antxr1Q9CZ52 562 aa23.25■■□□□ 1.31
Ccdc3-201ENSMUST00000027988 Cdc37l1Q9CZP7 335 aa23.24■■□□□ 1.31
Ccdc3-201ENSMUST00000027988 Uhrf1bp1lA2RSJ4 1457 aa23.24■■□□□ 1.31
Ccdc3-201ENSMUST00000027988 Q3UPC7 1272 aa23.24■■□□□ 1.31
Ccdc3-201ENSMUST00000027988 Znf541Q0GGX2 1363 aa23.23■■□□□ 1.31
Ccdc3-201ENSMUST00000027988 Atp7bQ64446 1462 aa23.22■■□□□ 1.31
Ccdc3-201ENSMUST00000027988 Vamp4O70480 141 aa23.22■■□□□ 1.31
Ccdc3-201ENSMUST00000027988 Ccdc171E9Q1U1 1324 aa23.22■■□□□ 1.31
Ccdc3-201ENSMUST00000027988 FanciQ8K368 1330 aa23.21■■□□□ 1.31
Ccdc3-201ENSMUST00000027988 Ciz1Q8VEH2 845 aa23.21■■□□□ 1.31
Ccdc3-201ENSMUST00000027988 Nwd1A6H603 1563 aa23.2■■□□□ 1.31
Ccdc3-201ENSMUST00000027988 SkilQ60665 675 aa23.2■■□□□ 1.3
Ccdc3-201ENSMUST00000027988 Plin1Q8CGN5 517 aa23.2■■□□□ 1.3
Ccdc3-201ENSMUST00000027988 Brd1E9PZ26 1189 aaKnown RBP23.2■■□□□ 1.3
Ccdc3-201ENSMUST00000027988 Ercc6l2Q9JIM3 1537 aa23.2■■□□□ 1.3
Ccdc3-201ENSMUST00000027988 Htatsf1Q8BGC0 757 aa23.19■■□□□ 1.3
Ccdc3-201ENSMUST00000027988 PplQ9R269 1755 aa23.19■■□□□ 1.3
Ccdc3-201ENSMUST00000027988 Fchsd2Q3USJ8 740 aa23.18■■□□□ 1.3
Ccdc3-201ENSMUST00000027988 Hs1bp3Q3TC93 395 aa23.18■■□□□ 1.3
Ccdc3-201ENSMUST00000027988 Klhdc4Q921I2 584 aa23.18■■□□□ 1.3
Ccdc3-201ENSMUST00000027988 Nsfl1cQ9CZ44 370 aaKnown RBP23.17■■□□□ 1.3
Ccdc3-201ENSMUST00000027988 Cabp2Q9JLK4 216 aa23.17■■□□□ 1.3
Ccdc3-201ENSMUST00000027988 Aldh1l1Q8R0Y6 902 aa23.16■■□□□ 1.3
Ccdc3-201ENSMUST00000027988 Terf2O35144 541 aa23.16■■□□□ 1.3
Ccdc3-201ENSMUST00000027988 Plekhg1F6S200 1446 aa23.15■■□□□ 1.3
Ccdc3-201ENSMUST00000027988 Map7O88735 730 aa23.14■■□□□ 1.29
Ccdc3-201ENSMUST00000027988 IghaA0A0A6YXW6 389 aa23.14■■□□□ 1.29
Ccdc3-201ENSMUST00000027988 Ppp1r15aP17564 657 aa23.14■■□□□ 1.29
Retrieved 100 of 22,080 RNA–protein pairs in 39.3 ms