RNA–Protein interactions for RNA: ENSMUST00000023426.11

Cldnd1-201, Transcript of Claudin domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldnd1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1-201ENSMUST00000023426 PaskQ8CEE6 1383 aa31.82■■■□□ 2.69
Cldnd1-201ENSMUST00000023426 Nkx1-2P42580 305 aa31.82■■■□□ 2.68
Cldnd1-201ENSMUST00000023426 ChgaP26339 463 aaKnown RBP31.81■■■□□ 2.68
Cldnd1-201ENSMUST00000023426 Duxf3A0A0N4SV92 674 aa31.81■■■□□ 2.68
Cldnd1-201ENSMUST00000023426 Trim28Q62318 834 aa31.79■■■□□ 2.68
Cldnd1-201ENSMUST00000023426 Dip2aQ8BWT5 1523 aa31.79■■■□□ 2.68
Cldnd1-201ENSMUST00000023426 Polr3glQ8R0C0 218 aa31.79■■■□□ 2.68
Cldnd1-201ENSMUST00000023426 Usp32F8VPZ3 1604 aa31.79■■■□□ 2.68
Cldnd1-201ENSMUST00000023426 Nwd1A6H603 1563 aa31.78■■■□□ 2.68
Cldnd1-201ENSMUST00000023426 Ercc6l2Q9JIM3 1537 aa31.77■■■□□ 2.68
Cldnd1-201ENSMUST00000023426 Map3k19E9Q3S4 1311 aa31.77■■■□□ 2.68
Cldnd1-201ENSMUST00000023426 Tmc1Q8R4P5 757 aa31.76■■■□□ 2.68
Cldnd1-201ENSMUST00000023426 Ppm1gQ61074 542 aa31.76■■■□□ 2.67
Cldnd1-201ENSMUST00000023426 Ttc21aQ8C0S4 1314 aa31.74■■■□□ 2.67
Cldnd1-201ENSMUST00000023426 Iqcf3Q9D498 203 aa31.73■■■□□ 2.67
Cldnd1-201ENSMUST00000023426 CanxP35564 591 aaKnown RBP31.72■■■□□ 2.67
Cldnd1-201ENSMUST00000023426 CastP51125 788 aa31.72■■■□□ 2.67
Cldnd1-201ENSMUST00000023426 Slc12a5Q91V14 1138 aa31.72■■■□□ 2.67
Cldnd1-201ENSMUST00000023426 Rlbp1Q9Z275 317 aa31.72■■■□□ 2.67
Cldnd1-201ENSMUST00000023426 Ipo8Q7TMY7 1010 aa31.7■■■□□ 2.67
Cldnd1-201ENSMUST00000023426 Trim26Q99PN3 545 aa31.69■■■□□ 2.66
Cldnd1-201ENSMUST00000023426 Swt1Q9DBQ9 907 aa31.69■■■□□ 2.66
Cldnd1-201ENSMUST00000023426 Ankrd50F7BE84 1390 aa31.69■■■□□ 2.66
Cldnd1-201ENSMUST00000023426 Psme1P97371 249 aa31.69■■■□□ 2.66
Cldnd1-201ENSMUST00000023426 Ccdc171E9Q1U1 1324 aa31.69■■■□□ 2.66
Cldnd1-201ENSMUST00000023426 Ppp1r15aP17564 657 aa31.68■■■□□ 2.66
Cldnd1-201ENSMUST00000023426 Dnai1Q8C0M8 701 aa31.67■■■□□ 2.66
Cldnd1-201ENSMUST00000023426 Atl3Q91YH5 541 aa31.67■■■□□ 2.66
Cldnd1-201ENSMUST00000023426 Q4VA45 678 aa31.67■■■□□ 2.66
Cldnd1-201ENSMUST00000023426 Idi2Q8BFZ6 227 aa31.67■■■□□ 2.66
Cldnd1-201ENSMUST00000023426 Trim30dE9PWL0 497 aa31.65■■■□□ 2.66
Cldnd1-201ENSMUST00000023426 Gemin5Q8BX17 1502 aaKnown RBP31.65■■■□□ 2.66
Cldnd1-201ENSMUST00000023426 PalmQ9Z0P4 383 aa31.64■■■□□ 2.66
Cldnd1-201ENSMUST00000023426 Atp7bQ64446 1462 aa31.64■■■□□ 2.66
Cldnd1-201ENSMUST00000023426 Ak7Q9D2H2 614 aa31.63■■■□□ 2.65
Cldnd1-201ENSMUST00000023426 Rbm25B2RY56 838 aaKnown RBP31.63■■■□□ 2.65
Cldnd1-201ENSMUST00000023426 Ccdc183A2AJB1 534 aa31.62■■■□□ 2.65
Cldnd1-201ENSMUST00000023426 PtpruB1AUH1 1446 aa31.62■■■□□ 2.65
Cldnd1-201ENSMUST00000023426 Txndc2Q6P902 515 aa31.62■■■□□ 2.65
Cldnd1-201ENSMUST00000023426 Hs1bp3Q3TC93 395 aa31.61■■■□□ 2.65
Cldnd1-201ENSMUST00000023426 Asxl2Q8BZ32 1370 aa31.61■■■□□ 2.65
Cldnd1-201ENSMUST00000023426 Pik3r4Q8VD65 1358 aa31.61■■■□□ 2.65
Cldnd1-201ENSMUST00000023426 Cps1Q8C196 1500 aa31.58■■■□□ 2.65
Cldnd1-201ENSMUST00000023426 Ppp2r3aB2RXC8 1150 aa31.58■■■□□ 2.65
Cldnd1-201ENSMUST00000023426 Hoxb7P09024 217 aa31.58■■■□□ 2.65
Cldnd1-201ENSMUST00000023426 Ccdc60Q8C4J0 545 aa31.56■■■□□ 2.64
Cldnd1-201ENSMUST00000023426 Kif1aP33173 1695 aa31.56■■■□□ 2.64
Cldnd1-201ENSMUST00000023426 Mre11Q61216 706 aa31.55■■■□□ 2.64
Cldnd1-201ENSMUST00000023426 Birc3O08863 600 aa31.54■■■□□ 2.64
Cldnd1-201ENSMUST00000023426 G3bp1P97855 465 aaKnown RBP31.54■■■□□ 2.64
Cldnd1-201ENSMUST00000023426 Hsp90aa1P07901 733 aaKnown RBP31.53■■■□□ 2.64
Cldnd1-201ENSMUST00000023426 4930567H17RikQ3V0K5 233 aa31.52■■■□□ 2.64
Cldnd1-201ENSMUST00000023426 Ccdc9Q8VC31 543 aaKnown RBP31.52■■■□□ 2.64
Cldnd1-201ENSMUST00000023426 CatipB9EKE5 520 aa31.52■■■□□ 2.64
Cldnd1-201ENSMUST00000023426 Hsp90ab1P11499 724 aaKnown RBP31.51■■■□□ 2.64
Cldnd1-201ENSMUST00000023426 Sirt1Q923E4 737 aa31.51■■■□□ 2.63
Cldnd1-201ENSMUST00000023426 Sart3Q9JLI8 962 aaKnown RBP31.51■■■□□ 2.63
Cldnd1-201ENSMUST00000023426 Chd2E9PZM4 1827 aaKnown RBP31.51■■■□□ 2.63
Cldnd1-201ENSMUST00000023426 Ppp1r3fQ9JIG4 799 aa31.49■■■□□ 2.63
Cldnd1-201ENSMUST00000023426 Slit3Q9WVB4 1523 aa31.49■■■□□ 2.63
Cldnd1-201ENSMUST00000023426 Spef2Q8C9J3 1734 aa31.47■■■□□ 2.63
Cldnd1-201ENSMUST00000023426 Armcx1Q9CX83 456 aa31.46■■■□□ 2.63
Cldnd1-201ENSMUST00000023426 Gnai1B2RSH2 354 aa31.46■■■□□ 2.63
Cldnd1-201ENSMUST00000023426 Maco1Q7TQE6 664 aaKnown RBP31.46■■■□□ 2.63
Cldnd1-201ENSMUST00000023426 Gnai3Q9DC51 354 aa31.46■■■□□ 2.63
Cldnd1-201ENSMUST00000023426 Rsph6aQ8CDR2 708 aa31.45■■■□□ 2.63
Cldnd1-201ENSMUST00000023426 Znf316Q6PGE4 1016 aa31.45■■■□□ 2.62
Cldnd1-201ENSMUST00000023426 Cdc37l1Q9CZP7 335 aa31.45■■■□□ 2.62
Cldnd1-201ENSMUST00000023426 Uhrf1bp1lA2RSJ4 1457 aa31.45■■■□□ 2.62
Cldnd1-201ENSMUST00000023426 Ppp1r9bQ6R891 817 aaKnown RBP31.43■■■□□ 2.62
Cldnd1-201ENSMUST00000023426 IghaA0A0A6YXW6 389 aa31.43■■■□□ 2.62
Cldnd1-201ENSMUST00000023426 Eif2s2Q99L45 331 aaKnown RBP31.43■■■□□ 2.62
Cldnd1-201ENSMUST00000023426 Tnrc6bQ8BKI2 1810 aaKnown RBP31.42■■■□□ 2.62
Cldnd1-201ENSMUST00000023426 Dip2bQ3UH60 1574 aa31.42■■■□□ 2.62
Cldnd1-201ENSMUST00000023426 Pik3c2bE9QAN8 1632 aa31.42■■■□□ 2.62
Cldnd1-201ENSMUST00000023426 PzpQ61838 1495 aa31.41■■■□□ 2.62
Cldnd1-201ENSMUST00000023426 Phlpp2Q8BXA7 1320 aa31.41■■■□□ 2.62
Cldnd1-201ENSMUST00000023426 KarsQ99MN1 595 aaKnown RBP31.41■■■□□ 2.62
Cldnd1-201ENSMUST00000023426 Bcl11aQ9QYE3 773 aa31.41■■■□□ 2.62
Cldnd1-201ENSMUST00000023426 Vamp4O70480 141 aa31.4■■■□□ 2.62
Cldnd1-201ENSMUST00000023426 Plekhm2Q80TQ5 1018 aa31.4■■■□□ 2.62
Cldnd1-201ENSMUST00000023426 Chmp4bQ9D8B3 224 aaKnown RBP31.4■■■□□ 2.62
Cldnd1-201ENSMUST00000023426 Znf335A2A5K6 1337 aa31.4■■■□□ 2.62
Cldnd1-201ENSMUST00000023426 Aldh1l1Q8R0Y6 902 aa31.39■■■□□ 2.62
Cldnd1-201ENSMUST00000023426 Map7O88735 730 aa31.38■■■□□ 2.61
Cldnd1-201ENSMUST00000023426 Astn2Q80Z10 1352 aa31.37■■■□□ 2.61
Cldnd1-201ENSMUST00000023426 Sos1Q62245 1319 aa31.36■■■□□ 2.61
Cldnd1-201ENSMUST00000023426 Cluap1Q8R3P7 413 aa31.36■■■□□ 2.61
Cldnd1-201ENSMUST00000023426 HnrnpmQ9D0E1 729 aaKnown RBP31.36■■■□□ 2.61
Cldnd1-201ENSMUST00000023426 Mdc1Q5PSV9 1707 aa31.36■■■□□ 2.61
Cldnd1-201ENSMUST00000023426 Gm6268A2A3U9 297 aa31.36■■■□□ 2.61
Cldnd1-201ENSMUST00000023426 Adamtsl3G3UXC7 1706 aa31.35■■■□□ 2.61
Cldnd1-201ENSMUST00000023426 Q3UPC7 1272 aa31.34■■■□□ 2.61
Cldnd1-201ENSMUST00000023426 Tbc1d32Q3URV1 1296 aa31.34■■■□□ 2.61
Cldnd1-201ENSMUST00000023426 Cavin2Q63918 418 aaKnown RBP31.34■■■□□ 2.61
Cldnd1-201ENSMUST00000023426 Znf330Q922H9 316 aa31.33■■■□□ 2.61
Cldnd1-201ENSMUST00000023426 Arap3Q8R5G7 1538 aa31.32■■■□□ 2.6
Cldnd1-201ENSMUST00000023426 AU019823E9PUQ3 292 aa31.32■■■□□ 2.6
Cldnd1-201ENSMUST00000023426 Nsd3Q6P2L6 1439 aa31.32■■■□□ 2.6
Cldnd1-201ENSMUST00000023426 SkilQ60665 675 aa31.31■■■□□ 2.6
Retrieved 100 of 22,080 RNA–protein pairs in 12.6 ms