RNA–Protein interactions for RNA: ENSMUST00000023154.2

Cldn1-201, Transcript of Claudin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldn1, Length 3,247 nt, Biotype protein coding, Subcellular localisation Tight Junction .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1-201ENSMUST00000023154 Kif1aP33173 1695 aa11.91□□□□□ -0.5
Cldn1-201ENSMUST00000023154 Arap3Q8R5G7 1538 aa11.9□□□□□ -0.5
Cldn1-201ENSMUST00000023154 Pik3r4Q8VD65 1358 aa11.9□□□□□ -0.5
Cldn1-201ENSMUST00000023154 Dusp27Q148W8 1138 aa11.9□□□□□ -0.51
Cldn1-201ENSMUST00000023154 Trim28Q62318 834 aa11.9□□□□□ -0.51
Cldn1-201ENSMUST00000023154 Rreb1Q3UH06 1700 aaKnown RBP11.89□□□□□ -0.51
Cldn1-201ENSMUST00000023154 N4bp2F8VQG7 1678 aaKnown RBP11.89□□□□□ -0.51
Cldn1-201ENSMUST00000023154 Chd4Q6PDQ2 1915 aaKnown RBP11.89□□□□□ -0.51
Cldn1-201ENSMUST00000023154 PalmQ9Z0P4 383 aa11.89□□□□□ -0.51
Cldn1-201ENSMUST00000023154 Uhrf1bp1lA2RSJ4 1457 aa11.88□□□□□ -0.51
Cldn1-201ENSMUST00000023154 Q3UJC8 639 aa11.88□□□□□ -0.51
Cldn1-201ENSMUST00000023154 Tspyl2Q7TQI8 677 aa11.87□□□□□ -0.51
Cldn1-201ENSMUST00000023154 D430041D05RikF6ZGR6 1678 aa11.87□□□□□ -0.51
Cldn1-201ENSMUST00000023154 Trim26Q99PN3 545 aa11.87□□□□□ -0.51
Cldn1-201ENSMUST00000023154 Kdm2bQ6P1G2 1309 aa11.87□□□□□ -0.51
Cldn1-201ENSMUST00000023154 Ksr2Q3UVC0 959 aa11.86□□□□□ -0.51
Cldn1-201ENSMUST00000023154 Pank1Q8K4K6 548 aa11.86□□□□□ -0.51
Cldn1-201ENSMUST00000023154 CatipB9EKE5 520 aa11.86□□□□□ -0.51
Cldn1-201ENSMUST00000023154 Egfem1Q8C088 590 aa11.86□□□□□ -0.51
Cldn1-201ENSMUST00000023154 Polr3glQ8R0C0 218 aa11.86□□□□□ -0.51
Cldn1-201ENSMUST00000023154 MyclP10166 368 aa11.86□□□□□ -0.51
Cldn1-201ENSMUST00000023154 Q4VA45 678 aa11.86□□□□□ -0.51
Cldn1-201ENSMUST00000023154 NgefQ8CHT1 710 aa11.86□□□□□ -0.51
Cldn1-201ENSMUST00000023154 Kif20bQ80WE4 1774 aaKnown RBP11.85□□□□□ -0.51
Cldn1-201ENSMUST00000023154 Mapk8ip3Q9ESN9 1337 aa11.85□□□□□ -0.51
Cldn1-201ENSMUST00000023154 Mbd3Q9Z2D8 285 aaKnown RBP11.85□□□□□ -0.51
Cldn1-201ENSMUST00000023154 C5P06684 1680 aa11.84□□□□□ -0.51
Cldn1-201ENSMUST00000023154 Ppp1r15aP17564 657 aa11.83□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Abcc10Q8R4P9 1501 aa11.83□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Als2Q920R0 1651 aa11.83□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Uhrf1bp1B2KF50 1429 aa11.83□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Mcm10Q0VBD2 885 aa11.83□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Topaz1E5FYH1 1653 aa11.83□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Cavin4A2AMM0 362 aa11.82□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Sox12Q04890 314 aa11.82□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Idi1P58044 227 aa11.82□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Pik3c2aQ61194 1686 aa11.82□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Znf541Q0GGX2 1363 aa11.82□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Spef2Q8C9J3 1734 aa11.81□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Ncbp3Q8BZR9 615 aaKnown RBP11.81□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Rtl5Q5DTT4 599 aa11.81□□□□□ -0.52
Cldn1-201ENSMUST00000023154 B4galnt3Q6L8S8 986 aa11.81□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Rsph6aQ8CDR2 708 aa11.81□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Sirt1Q923E4 737 aa11.81□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Ppp1r3fQ9JIG4 799 aa11.81□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Bcl9Q9D219 1425 aa11.81□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Ttll13A4Q9F6 804 aa11.81□□□□□ -0.52
Cldn1-201ENSMUST00000023154 NalcnQ8BXR5 1738 aa11.8□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Znf521Q6KAS7 1311 aa11.8□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Dbr1Q923B1 550 aa11.8□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Ankrd50F7BE84 1390 aa11.8□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Med1Q925J9 1575 aa11.8□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Ubr1O70481 1757 aa11.8□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Mon2Q80TL7 1715 aa11.79□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Ttc21aQ8C0S4 1314 aa11.79□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Gm10563F6WIE4 79 aa11.79□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Fchsd2Q3USJ8 740 aa11.79□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Ccar1Q8CH18 1146 aaKnown RBP11.79□□□□□ -0.52
Cldn1-201ENSMUST00000023154 CastP51125 788 aa11.79□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Plin1Q8CGN5 517 aa11.79□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Atp7bQ64446 1462 aa11.79□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Tmem94Q7TSH8 1360 aa11.79□□□□□ -0.52
Cldn1-201ENSMUST00000023154 PaskQ8CEE6 1383 aa11.79□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Trim58Q5NCC9 485 aa11.79□□□□□ -0.52
Cldn1-201ENSMUST00000023154 GphnQ8BUV3 769 aaKnown RBP11.79□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Senp3Q9EP97 568 aaKnown RBP11.79□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Astn2Q80Z10 1352 aa11.78□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Duxf3A0A0N4SV92 674 aa11.78□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Rbm25B2RY56 838 aaKnown RBP11.78□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Swt1Q9DBQ9 907 aa11.78□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Map2P20357 1828 aa11.78□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Fam135bQ9DAI6 1403 aa11.78□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Eif4a2P10630 407 aa11.77□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Rangap1P46061 589 aaKnown RBP11.77□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Cabp2Q9JLK4 216 aa11.77□□□□□ -0.52
Cldn1-201ENSMUST00000023154 Camta1A2A891 1682 aa11.77□□□□□ -0.53
Cldn1-201ENSMUST00000023154 C3P01027 1663 aa11.77□□□□□ -0.53
Cldn1-201ENSMUST00000023154 Rlbp1Q9Z275 317 aa11.77□□□□□ -0.53
Cldn1-201ENSMUST00000023154 Col16a1Q8BLX7 1580 aa11.76□□□□□ -0.53
Cldn1-201ENSMUST00000023154 Nckap5lQ6GQX2 1323 aa11.76□□□□□ -0.53
Cldn1-201ENSMUST00000023154 Hoxb7P09024 217 aa11.76□□□□□ -0.53
Cldn1-201ENSMUST00000023154 MpripP97434 1024 aa11.76□□□□□ -0.53
Cldn1-201ENSMUST00000023154 Ciz1Q8VEH2 845 aa11.76□□□□□ -0.53
Cldn1-201ENSMUST00000023154 Smc5Q8CG46 1101 aaKnown RBP11.75□□□□□ -0.53
Cldn1-201ENSMUST00000023154 Znf335A2A5K6 1337 aa11.75□□□□□ -0.53
Cldn1-201ENSMUST00000023154 MlecQ6ZQI3 291 aaKnown RBP11.75□□□□□ -0.53
Cldn1-201ENSMUST00000023154 Lmtk3Q5XJV6 1424 aa11.75□□□□□ -0.53
Cldn1-201ENSMUST00000023154 Parp14Q2EMV9 1817 aa11.75□□□□□ -0.53
Cldn1-201ENSMUST00000023154 Cdk12Q14AX6 1484 aaKnown RBP11.75□□□□□ -0.53
Cldn1-201ENSMUST00000023154 Scn7aB1AYL1 1681 aa11.75□□□□□ -0.53
Cldn1-201ENSMUST00000023154 Mdc1Q5PSV9 1707 aa11.74□□□□□ -0.53
Cldn1-201ENSMUST00000023154 Thsd7aQ69ZU6 1645 aa11.74□□□□□ -0.53
Cldn1-201ENSMUST00000023154 FancaQ9JL70 1439 aa11.74□□□□□ -0.53
Cldn1-201ENSMUST00000023154 Ccdc60Q8C4J0 545 aa11.74□□□□□ -0.53
Cldn1-201ENSMUST00000023154 CemipQ8BI06 1361 aa11.74□□□□□ -0.53
Cldn1-201ENSMUST00000023154 Slc35g1Q8BY79 368 aa11.74□□□□□ -0.53
Cldn1-201ENSMUST00000023154 Cdc37l1Q9CZP7 335 aa11.74□□□□□ -0.53
Cldn1-201ENSMUST00000023154 Sipa1l2Q80TE4 1722 aa11.73□□□□□ -0.53
Cldn1-201ENSMUST00000023154 Alpk3Q924C5 1678 aa11.73□□□□□ -0.53
Cldn1-201ENSMUST00000023154 PtprvP70289 1705 aa11.73□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 10.9 ms