RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 IL1RAPL1Q9NZN1 696 aa15.29■□□□□ 0.04
CLCNKA-201ENST00000331433 ZFP69BQ9UJL9 534 aa15.29■□□□□ 0.04
CLCNKA-201ENST00000331433 SNX10Q9Y5X0 201 aa15.29■□□□□ 0.04
CLCNKA-201ENST00000331433 SDR42E2A6NKP2 422 aa15.29■□□□□ 0.04
CLCNKA-201ENST00000331433 PPP1R12AO14974 1030 aaPredicted RBP15.29■□□□□ 0.04
CLCNKA-201ENST00000331433 FAM163BP0C2L3 166 aa15.29■□□□□ 0.04
CLCNKA-201ENST00000331433 CCNFP41002 786 aa15.29■□□□□ 0.04
CLCNKA-201ENST00000331433 CRHR2Q13324 411 aa15.29■□□□□ 0.04
CLCNKA-201ENST00000331433 E2F5Q15329 346 aa15.29■□□□□ 0.04
CLCNKA-201ENST00000331433 RSPH3Q86UC2 560 aa15.29■□□□□ 0.04
CLCNKA-201ENST00000331433 ARNTL2Q8WYA1 636 aa15.29■□□□□ 0.04
CLCNKA-201ENST00000331433 UTP4Q969X6 686 aaKnown RBP15.29■□□□□ 0.04
CLCNKA-201ENST00000331433 PGBD4Q96DM1 585 aa15.29■□□□□ 0.04
CLCNKA-201ENST00000331433 CNGB3Q9NQW8 809 aa15.29■□□□□ 0.04
CLCNKA-201ENST00000331433 CCDC195A0A1B0GUA6 201 aa15.28■□□□□ 0.04
CLCNKA-201ENST00000331433 C2orf71A6NGG8 1288 aa15.28■□□□□ 0.04
CLCNKA-201ENST00000331433 POMCP01189 267 aa15.28■□□□□ 0.04
CLCNKA-201ENST00000331433 LTFP02788 710 aa15.28■□□□□ 0.04
CLCNKA-201ENST00000331433 CDK16Q00536 496 aa15.28■□□□□ 0.04
CLCNKA-201ENST00000331433 RAB41Q5JT25 222 aa15.28■□□□□ 0.04
CLCNKA-201ENST00000331433 STEAP4Q687X5 459 aa15.28■□□□□ 0.04
CLCNKA-201ENST00000331433 PID1Q7Z2X4 250 aa15.28■□□□□ 0.04
CLCNKA-201ENST00000331433 NPWQ8N729 165 aa15.28■□□□□ 0.04
CLCNKA-201ENST00000331433 HASPINQ8TF76 798 aa15.28■□□□□ 0.04
CLCNKA-201ENST00000331433 KCNK13Q9HB14 408 aa15.28■□□□□ 0.04
CLCNKA-201ENST00000331433 SYBUQ9NX95 663 aa15.28■□□□□ 0.04
CLCNKA-201ENST00000331433 SF3B1O75533 1304 aaKnown RBP eCLIP15.28■□□□□ 0.04
CLCNKA-201ENST00000331433 HHLA1C9JL84 531 aa15.28■□□□□ 0.04
CLCNKA-201ENST00000331433 CAPN15O75808 1086 aa15.28■□□□□ 0.04
CLCNKA-201ENST00000331433 MLNP12872 115 aa15.28■□□□□ 0.04
CLCNKA-201ENST00000331433 TPI1P60174 286 aa15.28■□□□□ 0.04
CLCNKA-201ENST00000331433 SEMA3BQ13214 749 aa15.28■□□□□ 0.04
CLCNKA-201ENST00000331433 RIPK1Q13546 671 aa15.28■□□□□ 0.04
CLCNKA-201ENST00000331433 UPP1Q16831 310 aa15.28■□□□□ 0.04
CLCNKA-201ENST00000331433 PARP6Q2NL67 630 aa15.28■□□□□ 0.04
CLCNKA-201ENST00000331433 CES4AQ5XG92 561 aa15.28■□□□□ 0.04
CLCNKA-201ENST00000331433 CES3Q6UWW8 571 aa15.28■□□□□ 0.04
CLCNKA-201ENST00000331433 BHLHA9Q7RTU4 235 aa15.28■□□□□ 0.04
CLCNKA-201ENST00000331433 CLNKQ7Z7G1 428 aa15.28■□□□□ 0.04
CLCNKA-201ENST00000331433 ZNF398Q8TD17 642 aa15.28■□□□□ 0.04
CLCNKA-201ENST00000331433 MYLPFQ96A32 169 aa15.28■□□□□ 0.04
CLCNKA-201ENST00000331433 MTBPQ96DY7 904 aa15.28■□□□□ 0.04
CLCNKA-201ENST00000331433 AGAP3Q96P47 875 aa15.28■□□□□ 0.04
CLCNKA-201ENST00000331433 FERMT1Q9BQL6 677 aa15.28■□□□□ 0.04
CLCNKA-201ENST00000331433 RTP3Q9BQQ7 232 aa15.28■□□□□ 0.04
CLCNKA-201ENST00000331433 ARHGAP39Q9C0H5 1083 aa15.28■□□□□ 0.04
CLCNKA-201ENST00000331433 LRMDAQ9H2I8 198 aa15.28■□□□□ 0.04
CLCNKA-201ENST00000331433 EIF2B3Q9NR50 452 aaKnown RBP15.28■□□□□ 0.04
CLCNKA-201ENST00000331433 KLHL8Q9P2G9 620 aaPredicted RBP15.28■□□□□ 0.04
CLCNKA-201ENST00000331433 FBXW11Q9UKB1 542 aa15.28■□□□□ 0.04
CLCNKA-201ENST00000331433 CDH9Q9ULB4 789 aa15.28■□□□□ 0.04
CLCNKA-201ENST00000331433 MGEA5O60502 916 aa15.27■□□□□ 0.04
CLCNKA-201ENST00000331433 USP12O75317 370 aa15.27■□□□□ 0.04
CLCNKA-201ENST00000331433 CD52P31358 61 aa15.27■□□□□ 0.04
CLCNKA-201ENST00000331433 BRCC3P46736 316 aa15.27■□□□□ 0.04
CLCNKA-201ENST00000331433 GJA9P57773 515 aa15.27■□□□□ 0.04
CLCNKA-201ENST00000331433 IFRD2Q12894 506 aaPredicted RBP15.27■□□□□ 0.04
CLCNKA-201ENST00000331433 CRYMQ14894 314 aa15.27■□□□□ 0.04
CLCNKA-201ENST00000331433 SWT1Q5T5J6 900 aaKnown RBP15.27■□□□□ 0.04
CLCNKA-201ENST00000331433 SERINC5Q86VE9 423 aa15.27■□□□□ 0.04
CLCNKA-201ENST00000331433 NTAN1Q96AB6 310 aa15.27■□□□□ 0.04
CLCNKA-201ENST00000331433 SLC9A7Q96T83 725 aa15.27■□□□□ 0.04
CLCNKA-201ENST00000331433 TMEM120AQ9BXJ8 343 aa15.27■□□□□ 0.04
CLCNKA-201ENST00000331433 PRDM16Q9HAZ2 1276 aa15.27■□□□□ 0.04
CLCNKA-201ENST00000331433 HEY2Q9UBP5 337 aa15.27■□□□□ 0.04
CLCNKA-201ENST00000331433 PSAT1Q9Y617 370 aa15.27■□□□□ 0.04
CLCNKA-201ENST00000331433 ATP5HO75947 161 aa15.27■□□□□ 0.03
CLCNKA-201ENST00000331433 ALDH1A2O94788 518 aa15.27■□□□□ 0.03
CLCNKA-201ENST00000331433 DLDP09622 509 aaKnown RBP15.27■□□□□ 0.03
CLCNKA-201ENST00000331433 CYBAP13498 195 aa15.27■□□□□ 0.03
CLCNKA-201ENST00000331433 PTPN3P26045 913 aa15.27■□□□□ 0.03
CLCNKA-201ENST00000331433 THPOP40225 353 aa15.27■□□□□ 0.03
CLCNKA-201ENST00000331433 GTF2A1P52655 376 aaPredicted RBP15.27■□□□□ 0.03
CLCNKA-201ENST00000331433 ARFIP2P53365 341 aa15.27■□□□□ 0.03
CLCNKA-201ENST00000331433 IRX4P78413 519 aa15.27■□□□□ 0.03
CLCNKA-201ENST00000331433 SCAPQ12770 1279 aa15.27■□□□□ 0.03
CLCNKA-201ENST00000331433 TRIB2Q92519 343 aa15.27■□□□□ 0.03
CLCNKA-201ENST00000331433 SLC7A6OSQ96CW6 309 aaPredicted RBP15.27■□□□□ 0.03
CLCNKA-201ENST00000331433 SMARCD1Q96GM5 515 aa15.27■□□□□ 0.03
CLCNKA-201ENST00000331433 PRR11Q96HE9 360 aaPredicted RBP15.27■□□□□ 0.03
CLCNKA-201ENST00000331433 GORASP1Q9BQQ3 440 aa15.27■□□□□ 0.03
CLCNKA-201ENST00000331433 COLEC11Q9BWP8 271 aa15.27■□□□□ 0.03
CLCNKA-201ENST00000331433 ZNF395Q9H8N7 513 aaPredicted RBP15.27■□□□□ 0.03
CLCNKA-201ENST00000331433 ZFYVE28Q9HCC9 887 aa15.27■□□□□ 0.03
CLCNKA-201ENST00000331433 NMRK2Q9NPI5 230 aa15.27■□□□□ 0.03
CLCNKA-201ENST00000331433 CHST12Q9NRB3 414 aa15.27■□□□□ 0.03
CLCNKA-201ENST00000331433 FBXO6Q9NRD1 293 aaPredicted RBP15.27■□□□□ 0.03
CLCNKA-201ENST00000331433 GIT1Q9Y2X7 761 aa15.27■□□□□ 0.03
CLCNKA-201ENST00000331433 SHROOM3Q8TF72 1996 aa15.26■□□□□ 0.03
CLCNKA-201ENST00000331433 C9IYK1 514 aa15.26■□□□□ 0.03
CLCNKA-201ENST00000331433 B3GAT3O94766 335 aa15.26■□□□□ 0.03
CLCNKA-201ENST00000331433 PGAM1P18669 254 aa15.26■□□□□ 0.03
CLCNKA-201ENST00000331433 BDNFP23560 247 aa15.26■□□□□ 0.03
CLCNKA-201ENST00000331433 SERPINB9P50453 376 aa15.26■□□□□ 0.03
CLCNKA-201ENST00000331433 TMPRSS15P98073 1019 aa15.26■□□□□ 0.03
CLCNKA-201ENST00000331433 MGAT3Q09327 533 aa15.26■□□□□ 0.03
CLCNKA-201ENST00000331433 NIPAL4Q0D2K0 466 aa15.26■□□□□ 0.03
CLCNKA-201ENST00000331433 BST1Q10588 318 aa15.26■□□□□ 0.03
CLCNKA-201ENST00000331433 TRIM32Q13049 653 aa15.26■□□□□ 0.03
CLCNKA-201ENST00000331433 CTC1Q2NKJ3 1217 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms