RNA–Protein interactions for RNA: tP(UGG)A

TRN1, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRN1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRN1tP(UGG)A ATG20Q07528 640 aa18.77■□□□□ 0.6
TRN1tP(UGG)A GAS5Q08193 484 aa18.77■□□□□ 0.6
TRN1tP(UGG)A PIF1P07271 859 aa18.76■□□□□ 0.59
TRN1tP(UGG)A HAL5P38970 855 aaKnown RBP18.76■□□□□ 0.59
TRN1tP(UGG)A FPK1P53739 893 aa18.76■□□□□ 0.59
TRN1tP(UGG)A TOS4Q06266 489 aa18.76■□□□□ 0.59
TRN1tP(UGG)A YIR042CP40586 236 aa18.75■□□□□ 0.59
TRN1tP(UGG)A RAD50P12753 1312 aa18.74■□□□□ 0.59
TRN1tP(UGG)A RPT3P33298 428 aaKnown RBP18.73■□□□□ 0.59
TRN1tP(UGG)A SLI15P38283 698 aa18.72■□□□□ 0.59
TRN1tP(UGG)A JJJ2P46997 583 aa18.72■□□□□ 0.59
TRN1tP(UGG)A INM2Q05533 292 aa18.72■□□□□ 0.59
TRN1tP(UGG)A RRG1Q12167 365 aaPredicted RBP18.72■□□□□ 0.59
TRN1tP(UGG)A EPS1P40557 701 aa18.71■□□□□ 0.59
TRN1tP(UGG)A MRPS35P53292 345 aa18.71■□□□□ 0.59
TRN1tP(UGG)A BRE1Q07457 700 aaKnown RBP18.71■□□□□ 0.59
TRN1tP(UGG)A PSF3Q12146 194 aa18.71■□□□□ 0.59
TRN1tP(UGG)A PRP42Q03776 544 aaKnown RBP18.7■□□□□ 0.58
TRN1tP(UGG)A MSM1P22438 575 aa18.69■□□□□ 0.58
TRN1tP(UGG)A AFG2P32794 780 aa18.69■□□□□ 0.58
TRN1tP(UGG)A YFH7P43591 353 aa18.69■□□□□ 0.58
TRN1tP(UGG)A PBY1P38254 753 aa18.68■□□□□ 0.58
TRN1tP(UGG)A WRS1Q12109 432 aaKnown RBP18.68■□□□□ 0.58
TRN1tP(UGG)A ARG82P07250 355 aa18.67■□□□□ 0.58
TRN1tP(UGG)A PIB2P53191 635 aa18.67■□□□□ 0.58
TRN1tP(UGG)A FLO11P08640 1367 aa18.67■□□□□ 0.58
TRN1tP(UGG)A VAS1P07806 1104 aaKnown RBP18.65■□□□□ 0.58
TRN1tP(UGG)A RPC31P17890 251 aa18.65■□□□□ 0.58
TRN1tP(UGG)A PTK1P36002 662 aaPredicted RBP18.65■□□□□ 0.58
TRN1tP(UGG)A YMR147WP40218 223 aaKnown RBP18.65■□□□□ 0.58
TRN1tP(UGG)A NOP2P40991 618 aaKnown RBP18.65■□□□□ 0.58
TRN1tP(UGG)A TRM44Q02648 567 aaKnown RBP18.64■□□□□ 0.57
TRN1tP(UGG)A GAP1P19145 602 aaPredicted RBP18.63■□□□□ 0.57
TRN1tP(UGG)A RPS7AP26786 190 aaKnown RBP18.63■□□□□ 0.57
TRN1tP(UGG)A KTR1P27810 393 aaKnown RBP18.63■□□□□ 0.57
TRN1tP(UGG)A MDL2P33311 773 aa18.62■□□□□ 0.57
TRN1tP(UGG)A THS1P04801 734 aaKnown RBP18.61■□□□□ 0.57
TRN1tP(UGG)A GRX7P38068 203 aa18.61■□□□□ 0.57
TRN1tP(UGG)A SEN54Q02825 467 aaPredicted RBP18.61■□□□□ 0.57
TRN1tP(UGG)A CRF1Q04930 467 aa18.61■□□□□ 0.57
TRN1tP(UGG)A RIM20Q12033 661 aa18.61■□□□□ 0.57
TRN1tP(UGG)A STV1P37296 890 aa18.6■□□□□ 0.57
TRN1tP(UGG)A BRN1P38170 754 aa18.6■□□□□ 0.57
TRN1tP(UGG)A OSH3P38713 996 aaKnown RBP18.6■□□□□ 0.57
TRN1tP(UGG)A STM1P39015 273 aaKnown RBP18.6■□□□□ 0.57
TRN1tP(UGG)A VPS4P52917 437 aa18.6■□□□□ 0.57
TRN1tP(UGG)A GSC2P40989 1895 aa18.6■□□□□ 0.57
TRN1tP(UGG)A FET4P40988 552 aa18.59■□□□□ 0.57
TRN1tP(UGG)A ACK1Q07622 623 aaPredicted RBP18.59■□□□□ 0.57
TRN1tP(UGG)A TIM50Q02776 476 aa18.58■□□□□ 0.56
TRN1tP(UGG)A YLR278CQ05854 1341 aa18.57■□□□□ 0.56
TRN1tP(UGG)A CYB2P00175 591 aa18.57■□□□□ 0.56
TRN1tP(UGG)A SNF3P10870 884 aa18.57■□□□□ 0.56
TRN1tP(UGG)A GLC3P32775 704 aa18.57■□□□□ 0.56
TRN1tP(UGG)A BOI1P38041 980 aaKnown RBP18.57■□□□□ 0.56
TRN1tP(UGG)A FLO1P32768 1537 aa18.57■□□□□ 0.56
TRN1tP(UGG)A ENP2P48234 707 aaKnown RBP18.56■□□□□ 0.56
TRN1tP(UGG)A PUS6P53294 404 aa18.56■□□□□ 0.56
TRN1tP(UGG)A GCR2Q01722 534 aa18.56■□□□□ 0.56
TRN1tP(UGG)A RTG2P32608 588 aaKnown RBP18.55■□□□□ 0.56
TRN1tP(UGG)A APL6P46682 809 aa18.55■□□□□ 0.56
TRN1tP(UGG)A FPR4Q06205 392 aaPredicted RBP18.55■□□□□ 0.56
TRN1tP(UGG)A AIM7Q12156 149 aa18.55■□□□□ 0.56
TRN1tP(UGG)A AAP1P37898 856 aaKnown RBP18.54■□□□□ 0.56
TRN1tP(UGG)A IRC8P47046 822 aa18.54■□□□□ 0.56
TRN1tP(UGG)A BBC1P47068 1157 aa18.53■□□□□ 0.56
TRN1tP(UGG)A KAR5Q04746 504 aa18.53■□□□□ 0.56
TRN1tP(UGG)A DLD1P32891 587 aa18.52■□□□□ 0.56
TRN1tP(UGG)A LAM4P38800 1345 aa18.51■□□□□ 0.55
TRN1tP(UGG)A HPR1P17629 752 aaKnown RBP18.51■□□□□ 0.55
TRN1tP(UGG)A GEF1P37020 779 aa18.51■□□□□ 0.55
TRN1tP(UGG)A PIP2P52960 996 aa18.51■□□□□ 0.55
TRN1tP(UGG)A HXT17P53631 564 aa18.51■□□□□ 0.55
TRN1tP(UGG)A PUS5Q06244 254 aa18.51■□□□□ 0.55
TRN1tP(UGG)A OPI1P21957 404 aa18.5■□□□□ 0.55
TRN1tP(UGG)A YGR117CP53270 476 aa18.5■□□□□ 0.55
TRN1tP(UGG)A NPL4P33755 580 aa18.49■□□□□ 0.55
TRN1tP(UGG)A HXT13P39924 564 aa18.49■□□□□ 0.55
TRN1tP(UGG)A IOC3P43596 787 aa18.49■□□□□ 0.55
TRN1tP(UGG)A NSG2P53898 299 aa18.49■□□□□ 0.55
TRN1tP(UGG)A PKH3Q03306 898 aaPredicted RBP18.49■□□□□ 0.55
TRN1tP(UGG)A TAH18Q12181 623 aa18.49■□□□□ 0.55
TRN1tP(UGG)A EMP47P43555 445 aa18.47■□□□□ 0.55
TRN1tP(UGG)A UTP7P40055 554 aaKnown RBP18.46■□□□□ 0.55
TRN1tP(UGG)A MTC3P53077 123 aa18.46■□□□□ 0.55
TRN1tP(UGG)A YJL171CP46992 396 aa18.44■□□□□ 0.54
TRN1tP(UGG)A CBP1P07252 654 aa18.43■□□□□ 0.54
TRN1tP(UGG)A RRP8P38961 392 aaKnown RBP18.43■□□□□ 0.54
TRN1tP(UGG)A PPM2Q08282 695 aa18.43■□□□□ 0.54
TRN1tP(UGG)A MET1P36150 593 aa18.42■□□□□ 0.54
TRN1tP(UGG)A COQ1P18900 473 aa18.4■□□□□ 0.54
TRN1tP(UGG)A TPM1P17536 199 aaKnown RBP18.39■□□□□ 0.53
TRN1tP(UGG)A SSA4P22202 642 aaKnown RBP18.39■□□□□ 0.53
TRN1tP(UGG)A SLN1P39928 1220 aaPredicted RBP18.39■□□□□ 0.53
TRN1tP(UGG)A PEX21P50091 288 aa18.39■□□□□ 0.53
TRN1tP(UGG)A VHR2P40041 505 aa18.38■□□□□ 0.53
TRN1tP(UGG)A YPL260WQ08977 551 aa18.38■□□□□ 0.53
TRN1tP(UGG)A SSF2Q12153 453 aaPredicted RBP18.38■□□□□ 0.53
TRN1tP(UGG)A YHL050CP38721 697 aa18.36■□□□□ 0.53
TRN1tP(UGG)A CIC1P38779 376 aaKnown RBP18.36■□□□□ 0.53
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms