RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C CTR9P89105 1077 aa7.13□□□□□ -1.27
VPS4YPR173C PRT1P06103 763 aaKnown RBP7.12□□□□□ -1.27
VPS4YPR173C SRS2P12954 1174 aa7.12□□□□□ -1.27
VPS4YPR173C TRM1P15565 570 aaKnown RBP7.12□□□□□ -1.27
VPS4YPR173C MRX12P47084 519 aa7.12□□□□□ -1.27
VPS4YPR173C RCM1P53972 490 aa7.12□□□□□ -1.27
VPS4YPR173C AUS1Q08409 1394 aa7.12□□□□□ -1.27
VPS4YPR173C QCR6P00127 147 aa7.11□□□□□ -1.27
VPS4YPR173C PPH3P32345 308 aa7.11□□□□□ -1.27
VPS4YPR173C ATG32P40458 529 aa7.11□□□□□ -1.27
VPS4YPR173C MTR4P47047 1073 aaKnown RBP7.11□□□□□ -1.27
VPS4YPR173C PIL1P53252 339 aaKnown RBP7.11□□□□□ -1.27
VPS4YPR173C TBF1Q02457 562 aa7.11□□□□□ -1.27
VPS4YPR173C NOP58Q12499 511 aaKnown RBP7.11□□□□□ -1.27
VPS4YPR173C LCD1Q04377 747 aa7.1□□□□□ -1.27
VPS4YPR173C AGE1Q04412 482 aa7.1□□□□□ -1.27
VPS4YPR173C RPO41P13433 1351 aaKnown RBP7.09□□□□□ -1.27
VPS4YPR173C RAD50P12753 1312 aa7.09□□□□□ -1.27
VPS4YPR173C NUP145P49687 1317 aa7.09□□□□□ -1.27
VPS4YPR173C BIO2P32451 375 aa7.09□□□□□ -1.27
VPS4YPR173C RPL34BP40525 121 aaKnown RBP7.09□□□□□ -1.27
VPS4YPR173C GYP7P48365 746 aa7.09□□□□□ -1.27
VPS4YPR173C TUB4P53378 473 aa7.09□□□□□ -1.27
VPS4YPR173C NKP2Q06162 153 aa7.09□□□□□ -1.27
VPS4YPR173C DLD1P32891 587 aa7.08□□□□□ -1.28
VPS4YPR173C RRT14P40470 206 aa7.08□□□□□ -1.28
VPS4YPR173C YPP1P46951 817 aa7.08□□□□□ -1.28
VPS4YPR173C SAS4Q04003 481 aa7.08□□□□□ -1.28
VPS4YPR173C PAT1P25644 796 aaKnown RBP7.07□□□□□ -1.28
VPS4YPR173C BDH2P39713 417 aa7.07□□□□□ -1.28
VPS4YPR173C MAM1P40065 302 aa7.07□□□□□ -1.28
VPS4YPR173C RSC1P53236 928 aa7.07□□□□□ -1.28
VPS4YPR173C YNL108CP53929 270 aa7.07□□□□□ -1.28
VPS4YPR173C YNL050CP53952 270 aa7.07□□□□□ -1.28
VPS4YPR173C GCR2Q01722 534 aa7.07□□□□□ -1.28
VPS4YPR173C TIF1P10081 395 aaKnown RBP7.06□□□□□ -1.28
VPS4YPR173C MAK16P10962 306 aaPredicted RBP7.06□□□□□ -1.28
VPS4YPR173C VRP1P37370 817 aa7.06□□□□□ -1.28
VPS4YPR173C YNG2P38806 282 aaKnown RBP7.06□□□□□ -1.28
VPS4YPR173C ZDS1P50111 915 aaKnown RBP7.06□□□□□ -1.28
VPS4YPR173C DSD1P53095 428 aa7.06□□□□□ -1.28
VPS4YPR173C CPS1P27614 576 aa7.05□□□□□ -1.28
VPS4YPR173C SPT5P27692 1063 aaKnown RBP7.05□□□□□ -1.28
VPS4YPR173C AKL1P38080 1108 aaKnown RBP7.05□□□□□ -1.28
VPS4YPR173C RFC1P38630 861 aaKnown RBP7.05□□□□□ -1.28
VPS4YPR173C RRN7P40992 514 aa7.05□□□□□ -1.28
VPS4YPR173C YDL206WQ12424 762 aa7.05□□□□□ -1.28
VPS4YPR173C RPA14P50106 137 aa7.04□□□□□ -1.28
VPS4YPR173C PRP43P53131 767 aaKnown RBP7.04□□□□□ -1.28
VPS4YPR173C HST1P53685 503 aa7.04□□□□□ -1.28
VPS4YPR173C RIA1P53893 1110 aa7.04□□□□□ -1.28
VPS4YPR173C SRT1Q03175 343 aa7.04□□□□□ -1.28
VPS4YPR173C GYP1Q08484 637 aa7.04□□□□□ -1.28
VPS4YPR173C USO1P25386 1790 aa7.04□□□□□ -1.28
VPS4YPR173C APC1P53886 1748 aa7.04□□□□□ -1.28
VPS4YPR173C ERG12P07277 443 aa7.03□□□□□ -1.28
VPS4YPR173C RPS19AP07280 144 aaKnown RBP7.03□□□□□ -1.28
VPS4YPR173C RPS19BP07281 144 aaPredicted RBP7.03□□□□□ -1.28
VPS4YPR173C BRN1P38170 754 aa7.03□□□□□ -1.28
VPS4YPR173C PAC1P39946 494 aaKnown RBP7.03□□□□□ -1.28
VPS4YPR173C CIR1P42940 261 aa7.03□□□□□ -1.28
VPS4YPR173C CSI1Q04368 295 aa7.03□□□□□ -1.28
VPS4YPR173C YDJ1P25491 409 aaKnown RBP7.02□□□□□ -1.28
VPS4YPR173C RPN12P32496 274 aa7.02□□□□□ -1.28
VPS4YPR173C SPT16P32558 1035 aaKnown RBP7.02□□□□□ -1.28
VPS4YPR173C RTG2P32608 588 aaKnown RBP7.02□□□□□ -1.28
VPS4YPR173C RKM3P38222 552 aa7.02□□□□□ -1.28
VPS4YPR173C NMD2P38798 1089 aaKnown RBP7.02□□□□□ -1.28
VPS4YPR173C SPO1P53541 631 aa7.02□□□□□ -1.28
VPS4YPR173C MDG1P53885 366 aa7.02□□□□□ -1.28
VPS4YPR173C ESC2Q06340 456 aa7.02□□□□□ -1.28
VPS4YPR173C ALR1Q08269 859 aa7.02□□□□□ -1.28
VPS4YPR173C GAS4Q08271 471 aa7.02□□□□□ -1.28
VPS4YPR173C RNR2P09938 399 aaKnown RBP7.01□□□□□ -1.29
VPS4YPR173C RSM25P40496 264 aa7.01□□□□□ -1.29
VPS4YPR173C HYR1P40581 163 aaKnown RBP7.01□□□□□ -1.29
VPS4YPR173C NPA3P47122 385 aa7.01□□□□□ -1.29
VPS4YPR173C KXD1P53158 218 aa7.01□□□□□ -1.29
VPS4YPR173C NAF1P53919 492 aaKnown RBP7.01□□□□□ -1.29
VPS4YPR173C YPR097WQ06839 1073 aa7.01□□□□□ -1.29
VPS4YPR173C AIM44Q99299 758 aa7.01□□□□□ -1.29
VPS4YPR173C ROM2P51862 1356 aaKnown RBP7.01□□□□□ -1.29
VPS4YPR173C CDC16P09798 840 aa7.01□□□□□ -1.29
VPS4YPR173C RPS24AP0CX31 135 aaKnown RBP7.01□□□□□ -1.29
VPS4YPR173C RPS24BP0CX32 135 aaKnown RBP7.01□□□□□ -1.29
VPS4YPR173C SUP45P12385 437 aaKnown RBP7.01□□□□□ -1.29
VPS4YPR173C NTH2P35172 780 aa7.01□□□□□ -1.29
VPS4YPR173C XDJ1P39102 459 aa7.01□□□□□ -1.29
VPS4YPR173C HXT13P39924 564 aa7.01□□□□□ -1.29
VPS4YPR173C KRE33P53914 1056 aaKnown RBP7.01□□□□□ -1.29
VPS4YPR173C VPS20Q04272 221 aa7.01□□□□□ -1.29
VPS4YPR173C HRQ1Q05549 1077 aa7.01□□□□□ -1.29
VPS4YPR173C YPR204WQ08995 1032 aa7.01□□□□□ -1.29
VPS4YPR173C DPS1P04802 557 aaKnown RBP7□□□□□ -1.29
VPS4YPR173C PDC1P06169 563 aaKnown RBP7□□□□□ -1.29
VPS4YPR173C BIK1P11709 440 aa7□□□□□ -1.29
VPS4YPR173C MRF1P30775 413 aaPredicted RBP7□□□□□ -1.29
VPS4YPR173C MIC60P36112 540 aa7□□□□□ -1.29
VPS4YPR173C RVS167P39743 482 aaKnown RBP7□□□□□ -1.29
VPS4YPR173C TPM2P40414 161 aa7□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 50 ms