RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C MRP7P12687 371 aa9.1□□□□□ -0.95
UME1YPL139C RAD24P32641 659 aa9.1□□□□□ -0.95
UME1YPL139C GAS5Q08193 484 aa9.1□□□□□ -0.95
UME1YPL139C FLO11P08640 1367 aa9.08□□□□□ -0.96
UME1YPL139C SET1P38827 1080 aaKnown RBP9.08□□□□□ -0.96
UME1YPL139C SPL2P38839 148 aa9.08□□□□□ -0.96
UME1YPL139C VPS29P38759 282 aa9.07□□□□□ -0.96
UME1YPL139C PEX21P50091 288 aa9.07□□□□□ -0.96
UME1YPL139C ITC1P53125 1264 aa9.07□□□□□ -0.96
UME1YPL139C DPL1Q05567 589 aa9.07□□□□□ -0.96
UME1YPL139C STV1P37296 890 aa9.06□□□□□ -0.96
UME1YPL139C FET4P40988 552 aa9.06□□□□□ -0.96
UME1YPL139C RTG2P32608 588 aaKnown RBP9.05□□□□□ -0.96
UME1YPL139C ICP55P40051 511 aa9.05□□□□□ -0.96
UME1YPL139C RPT4P53549 437 aaKnown RBP9.05□□□□□ -0.96
UME1YPL139C SAC3P46674 1301 aa9.05□□□□□ -0.96
UME1YPL139C KRE2P27809 442 aa9.04□□□□□ -0.96
UME1YPL139C VPS4P52917 437 aa9.04□□□□□ -0.96
UME1YPL139C DPH6Q12429 685 aa9.04□□□□□ -0.96
UME1YPL139C PTC4P38089 393 aa9.03□□□□□ -0.96
UME1YPL139C SRC1Q03707 834 aa9.03□□□□□ -0.96
UME1YPL139C TOS4Q06266 489 aa9.03□□□□□ -0.96
UME1YPL139C PSH1Q12161 406 aa9.03□□□□□ -0.96
UME1YPL139C DUR1,2P32528 1835 aaKnown RBP9.02□□□□□ -0.96
UME1YPL139C MGM1P32266 881 aa9.02□□□□□ -0.97
UME1YPL139C NGR1P32831 672 aaKnown RBP9.02□□□□□ -0.97
UME1YPL139C STS1P38637 319 aa9.02□□□□□ -0.97
UME1YPL139C CSI1Q04368 295 aa9.02□□□□□ -0.97
UME1YPL139C THI3Q07471 609 aa9.02□□□□□ -0.97
UME1YPL139C HTA1P04911 132 aaKnown RBP9.01□□□□□ -0.97
UME1YPL139C HTA2P04912 132 aa9.01□□□□□ -0.97
UME1YPL139C RPP0P05317 312 aaKnown RBP9.01□□□□□ -0.97
UME1YPL139C VPS27P40343 622 aaKnown RBP9.01□□□□□ -0.97
UME1YPL139C TRM44Q02648 567 aaKnown RBP9.01□□□□□ -0.97
UME1YPL139C RVB2Q12464 471 aaKnown RBP9.01□□□□□ -0.97
UME1YPL139C AFG2P32794 780 aa9□□□□□ -0.97
UME1YPL139C UBP12P39538 1254 aa9□□□□□ -0.97
UME1YPL139C BOI2P39969 1040 aa9□□□□□ -0.97
UME1YPL139C VHR2P40041 505 aa9□□□□□ -0.97
UME1YPL139C GSM1P42950 618 aa9□□□□□ -0.97
UME1YPL139C RPS9BP05755 195 aaKnown RBP8.99□□□□□ -0.97
UME1YPL139C GLC3P32775 704 aa8.99□□□□□ -0.97
UME1YPL139C SLA1P32790 1244 aa8.99□□□□□ -0.97
UME1YPL139C YDR344CQ05510 147 aa8.99□□□□□ -0.97
UME1YPL139C GYP5Q12344 894 aa8.99□□□□□ -0.97
UME1YPL139C MSM1P22438 575 aa8.99□□□□□ -0.97
UME1YPL139C LCB1P25045 558 aaKnown RBP8.99□□□□□ -0.97
UME1YPL139C ILV3P39522 585 aaKnown RBP8.99□□□□□ -0.97
UME1YPL139C YEL023CP39992 682 aa8.99□□□□□ -0.97
UME1YPL139C YPP1P46951 817 aa8.99□□□□□ -0.97
UME1YPL139C TIM50Q02776 476 aa8.99□□□□□ -0.97
UME1YPL139C IRC4Q03036 179 aa8.99□□□□□ -0.97
UME1YPL139C ETP1P38748 585 aaKnown RBP8.98□□□□□ -0.97
UME1YPL139C MTC5Q03897 1148 aa8.98□□□□□ -0.97
UME1YPL139C YGR117CP53270 476 aa8.97□□□□□ -0.97
UME1YPL139C DAL5P15365 543 aa8.96□□□□□ -0.98
UME1YPL139C HPR1P17629 752 aaKnown RBP8.96□□□□□ -0.98
UME1YPL139C YIL092WP40497 633 aa8.96□□□□□ -0.98
UME1YPL139C YIL089WP40500 205 aa8.96□□□□□ -0.98
UME1YPL139C EMP47P43555 445 aa8.96□□□□□ -0.98
UME1YPL139C ELP4Q02884 456 aaKnown RBP8.96□□□□□ -0.98
UME1YPL139C CDC45Q08032 650 aa8.96□□□□□ -0.98
UME1YPL139C RRG1Q12167 365 aaPredicted RBP8.96□□□□□ -0.98
UME1YPL139C AIM7Q12156 149 aa8.95□□□□□ -0.98
UME1YPL139C ADR1P07248 1323 aa8.94□□□□□ -0.98
UME1YPL139C RPS19AP07280 144 aaKnown RBP8.94□□□□□ -0.98
UME1YPL139C RPS19BP07281 144 aaPredicted RBP8.94□□□□□ -0.98
UME1YPL139C DCW1P36091 449 aa8.94□□□□□ -0.98
UME1YPL139C UTP7P40055 554 aaKnown RBP8.94□□□□□ -0.98
UME1YPL139C RPS7AP26786 190 aaKnown RBP8.93□□□□□ -0.98
UME1YPL139C RPT3P33298 428 aaKnown RBP8.93□□□□□ -0.98
UME1YPL139C FUN12P39730 1002 aaKnown RBP8.93□□□□□ -0.98
UME1YPL139C NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.93□□□□□ -0.98not detected
UME1YPL139C NOP8Q08287 484 aaPredicted RBP8.93□□□□□ -0.98
UME1YPL139C DMA1P38823 416 aa8.92□□□□□ -0.98
UME1YPL139C PRP42Q03776 544 aaKnown RBP8.92□□□□□ -0.98
UME1YPL139C UBX2Q04228 584 aa8.92□□□□□ -0.98
UME1YPL139C POM152P39685 1337 aa8.91□□□□□ -0.98
UME1YPL139C ARG82P07250 355 aa8.91□□□□□ -0.98
UME1YPL139C PRS1P32895 427 aaKnown RBP8.91□□□□□ -0.98
UME1YPL139C PNT1P38969 423 aa8.91□□□□□ -0.98
UME1YPL139C PEA2P40091 420 aa8.91□□□□□ -0.98
UME1YPL139C MTC3P53077 123 aa8.91□□□□□ -0.98
UME1YPL139C MAK21Q12176 1025 aaKnown RBP8.91□□□□□ -0.98
UME1YPL139C GLO3P38682 493 aaKnown RBP8.9□□□□□ -0.98
UME1YPL139C DUS1P53759 423 aaKnown RBP8.9□□□□□ -0.98
UME1YPL139C WRS1Q12109 432 aaKnown RBP8.89□□□□□ -0.99
UME1YPL139C SNU66Q12420 587 aaPredicted RBP8.89□□□□□ -0.99
UME1YPL139C CBP1P07252 654 aa8.88□□□□□ -0.99
UME1YPL139C SEC18P18759 758 aaKnown RBP8.88□□□□□ -0.99
UME1YPL139C YIR042CP40586 236 aa8.88□□□□□ -0.99
UME1YPL139C SPO1P53541 631 aa8.88□□□□□ -0.99
UME1YPL139C CRF1Q04930 467 aa8.88□□□□□ -0.99
UME1YPL139C FLO1P32768 1537 aa8.88□□□□□ -0.99
UME1YPL139C YNL193WP53870 558 aa8.87□□□□□ -0.99
UME1YPL139C KTR3P38130 404 aaPredicted RBP8.86□□□□□ -0.99
UME1YPL139C HAL5P38970 855 aaKnown RBP8.86□□□□□ -0.99
UME1YPL139C NSG2P53898 299 aa8.86□□□□□ -0.99
UME1YPL139C CWC15Q03772 175 aaKnown RBP8.86□□□□□ -0.99
UME1YPL139C RPN7Q06103 429 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 102.2 ms