RNA–Protein interactions for RNA: YPL087W

YDC1, Transcript of Alkaline dihydroceramidase, involved in sphingolipid metabolism, yeastyeast

Gene YDC1, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDC1YPL087W ACF4P47129 309 aa7.6□□□□□ -1.19
YDC1YPL087W MRPL16P38064 232 aa7.59□□□□□ -1.19
YDC1YPL087W QDR1P40475 563 aa7.59□□□□□ -1.19
YDC1YPL087W NAM8Q00539 523 aaKnown RBP7.59□□□□□ -1.19
YDC1YPL087W APC11Q12157 165 aa7.59□□□□□ -1.19
YDC1YPL087W STB3Q12427 513 aa7.59□□□□□ -1.19
YDC1YPL087W STM1P39015 273 aaKnown RBP7.58□□□□□ -1.2
YDC1YPL087W ALD2P47771 506 aa7.58□□□□□ -1.2
YDC1YPL087W CUZ1P53899 274 aa7.58□□□□□ -1.2
YDC1YPL087W SMC1P32908 1225 aa7.57□□□□□ -1.2
YDC1YPL087W CEM1P39525 442 aa7.57□□□□□ -1.2
YDC1YPL087W HXT8P40886 569 aa7.57□□□□□ -1.2
YDC1YPL087W SKP1P52286 194 aa7.57□□□□□ -1.2
YDC1YPL087W UFD2P54860 961 aa7.57□□□□□ -1.2
YDC1YPL087W FPS1P23900 669 aa7.56□□□□□ -1.2
YDC1YPL087W GRS1P38088 690 aaKnown RBP7.56□□□□□ -1.2
YDC1YPL087W ISW1P38144 1129 aa7.56□□□□□ -1.2
YDC1YPL087W NCL1P38205 684 aaKnown RBP7.56□□□□□ -1.2
YDC1YPL087W LYS5P50113 272 aa7.56□□□□□ -1.2
YDC1YPL087W KRE33P53914 1056 aaKnown RBP7.56□□□□□ -1.2
YDC1YPL087W YDR461C-AQ2V2P7 80 aa7.56□□□□□ -1.2
YDC1YPL087W RPC31P17890 251 aa7.55□□□□□ -1.2
YDC1YPL087W GIP1P38229 639 aa7.55□□□□□ -1.2
YDC1YPL087W ERP5P38819 212 aa7.55□□□□□ -1.2
YDC1YPL087W SUT1P53032 299 aaKnown RBP7.55□□□□□ -1.2
YDC1YPL087W YML020WQ03722 664 aa7.55□□□□□ -1.2
YDC1YPL087W YOR296WQ08748 1289 aa7.55□□□□□ -1.2
YDC1YPL087W TRL1P09880 827 aaKnown RBP7.54□□□□□ -1.2
YDC1YPL087W APM2P38700 605 aa7.54□□□□□ -1.2
YDC1YPL087W CUS1Q02554 436 aaPredicted RBP7.54□□□□□ -1.2
YDC1YPL087W HEH2Q03281 663 aa7.54□□□□□ -1.2
YDC1YPL087W TY1B-DR4Q07793 1604 aa7.53□□□□□ -1.2
YDC1YPL087W SEC20P28791 383 aa7.53□□□□□ -1.2
YDC1YPL087W YDL176WQ12027 708 aa7.53□□□□□ -1.2
YDC1YPL087W CCP1P00431 361 aa7.52□□□□□ -1.21
YDC1YPL087W BOI1P38041 980 aaKnown RBP7.52□□□□□ -1.21
YDC1YPL087W ADE12P80210 433 aaKnown RBP7.52□□□□□ -1.21
YDC1YPL087W TRS120Q04183 1289 aa7.51□□□□□ -1.21
YDC1YPL087W DPH6Q12429 685 aa7.51□□□□□ -1.21
YDC1YPL087W TCB3Q03640 1545 aaKnown RBP7.51□□□□□ -1.21
YDC1YPL087W MSN1P22148 382 aa7.5□□□□□ -1.21
YDC1YPL087W RAD55P38953 406 aa7.5□□□□□ -1.21
YDC1YPL087W YGR035CP53222 116 aa7.5□□□□□ -1.21
YDC1YPL087W RPB10P22139 70 aa7.49□□□□□ -1.21
YDC1YPL087W NTA1P40354 457 aa7.49□□□□□ -1.21
YDC1YPL087W MDJ2P42834 146 aa7.49□□□□□ -1.21
YDC1YPL087W SYT1Q06836 1226 aa7.49□□□□□ -1.21
YDC1YPL087W NOP8Q08287 484 aaPredicted RBP7.49□□□□□ -1.21
YDC1YPL087W SPA2P23201 1466 aaKnown RBP7.49□□□□□ -1.21
YDC1YPL087W RSC2Q06488 889 aa7.48□□□□□ -1.21
YDC1YPL087W YHL050CP38721 697 aa7.47□□□□□ -1.21
YDC1YPL087W YHR219WP38900 624 aa7.47□□□□□ -1.21
YDC1YPL087W IRS4P36115 615 aaKnown RBP7.46□□□□□ -1.22
YDC1YPL087W BSD2P38356 321 aa7.46□□□□□ -1.22
YDC1YPL087W MSC6Q08818 692 aaKnown RBP7.46□□□□□ -1.22
YDC1YPL087W PPX1P38698 397 aa7.45□□□□□ -1.22
YDC1YPL087W AIM46P38885 310 aa7.45□□□□□ -1.22
YDC1YPL087W JJJ3P47138 172 aa7.45□□□□□ -1.22
YDC1YPL087W HPF1Q05164 967 aa7.45□□□□□ -1.22
YDC1YPL087W YER156CP40093 338 aaKnown RBP7.44□□□□□ -1.22
YDC1YPL087W NUT2Q06213 157 aa7.44□□□□□ -1.22
YDC1YPL087W PSY2P40164 858 aa7.43□□□□□ -1.22
YDC1YPL087W RGD2P43556 714 aa7.43□□□□□ -1.22
YDC1YPL087W ITC1P53125 1264 aa7.43□□□□□ -1.22
YDC1YPL087W YNL011CP53980 444 aa7.43□□□□□ -1.22
YDC1YPL087W KTR2P33550 425 aa7.42□□□□□ -1.22
YDC1YPL087W YIL165CP40446 119 aa7.42□□□□□ -1.22
YDC1YPL087W CDC55Q00362 526 aa7.42□□□□□ -1.22
YDC1YPL087W RSC4Q02206 625 aa7.41□□□□□ -1.22
YDC1YPL087W SEN54Q02825 467 aaPredicted RBP7.41□□□□□ -1.22
YDC1YPL087W TY1A-DR2Q03964 440 aaKnown RBP7.41□□□□□ -1.22
YDC1YPL087W TIF6Q12522 245 aaKnown RBP7.41□□□□□ -1.22
YDC1YPL087W HEM3P28789 327 aa7.4□□□□□ -1.22
YDC1YPL087W MSC7P38694 644 aa7.4□□□□□ -1.22
YDC1YPL087W THI12P42883 340 aa7.4□□□□□ -1.22
YDC1YPL087W THI5P43534 340 aa7.4□□□□□ -1.22
YDC1YPL087W THI11P47183 340 aa7.4□□□□□ -1.22
YDC1YPL087W SAM37P50110 327 aa7.4□□□□□ -1.22
YDC1YPL087W YNR040WP53736 256 aa7.4□□□□□ -1.22
YDC1YPL087W THI13Q07748 340 aa7.4□□□□□ -1.22
YDC1YPL087W FRT1Q99332 602 aa7.4□□□□□ -1.22
YDC1YPL087W KNS1P32350 737 aaPredicted RBP7.39□□□□□ -1.23
YDC1YPL087W ASF1P32447 279 aa7.39□□□□□ -1.23
YDC1YPL087W GCD6P32501 712 aaKnown RBP7.39□□□□□ -1.23
YDC1YPL087W ECM2P38241 364 aaKnown RBP7.39□□□□□ -1.23
YDC1YPL087W BSC2Q05611 235 aa7.39□□□□□ -1.23
YDC1YPL087W EMG1Q06287 252 aaKnown RBP7.39□□□□□ -1.23
YDC1YPL087W IDI1P15496 288 aa7.38□□□□□ -1.23
YDC1YPL087W TRK2P28584 889 aa7.38□□□□□ -1.23
YDC1YPL087W NAB2P32505 525 aaKnown RBP RIP-Chip data7.38□□□□□ -1.23not detected
YDC1YPL087W GPM1P00950 247 aaKnown RBP7.37□□□□□ -1.23
YDC1YPL087W MET1P36150 593 aa7.37□□□□□ -1.23
YDC1YPL087W CIC1P38779 376 aaKnown RBP7.37□□□□□ -1.23
YDC1YPL087W PPT1P53043 513 aa7.37□□□□□ -1.23
YDC1YPL087W PDC5P16467 563 aaKnown RBP7.36□□□□□ -1.23
YDC1YPL087W IPL1P38991 367 aa7.36□□□□□ -1.23
YDC1YPL087W PRK1P40494 810 aa7.36□□□□□ -1.23
YDC1YPL087W NOC3Q07896 663 aaPredicted RBP7.35□□□□□ -1.23
YDC1YPL087W MNL2Q12205 849 aa7.35□□□□□ -1.23
YDC1YPL087W AI1P03875 834 aa7.34□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 72 ms