RNA–Protein interactions for RNA: YPL016W

SWI1, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI1, Length 3,945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI1YPL016W TPM2P40414 161 aa4.31□□□□□ -1.72
SWI1YPL016W REX2P54964 269 aaKnown RBP4.31□□□□□ -1.72
SWI1YPL016W VPS60Q03390 229 aa4.31□□□□□ -1.72
SWI1YPL016W YDR338CQ05497 695 aa4.31□□□□□ -1.72
SWI1YPL016W RPS19AP07280 144 aaKnown RBP4.31□□□□□ -1.72
SWI1YPL016W RPS19BP07281 144 aaPredicted RBP4.31□□□□□ -1.72
SWI1YPL016W PRD1P25375 712 aa4.31□□□□□ -1.72
SWI1YPL016W VPS5Q92331 675 aa4.31□□□□□ -1.72
SWI1YPL016W SAP155P43612 1002 aa4.3□□□□□ -1.72
SWI1YPL016W JSN1P47135 1091 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
SWI1YPL016W TAN1P53072 289 aaPredicted RBP4.3□□□□□ -1.72
SWI1YPL016W MRS2Q01926 470 aa4.3□□□□□ -1.72
SWI1YPL016W SLK19Q08581 821 aaKnown RBP4.3□□□□□ -1.72
SWI1YPL016W ATO2P32907 282 aa4.3□□□□□ -1.72
SWI1YPL016W CSE1P33307 960 aa4.3□□□□□ -1.72
SWI1YPL016W RVS167P39743 482 aaKnown RBP4.3□□□□□ -1.72
SWI1YPL016W IAH1P41734 238 aa4.3□□□□□ -1.72
SWI1YPL016W CTK3P46963 296 aaPredicted RBP4.3□□□□□ -1.72
SWI1YPL016W POL32P47110 350 aa4.3□□□□□ -1.72
SWI1YPL016W MSB4Q12317 492 aa4.3□□□□□ -1.72
SWI1YPL016W LAM4P38800 1345 aa4.29□□□□□ -1.72
SWI1YPL016W PRP31P49704 494 aaPredicted RBP4.29□□□□□ -1.72
SWI1YPL016W RTF1P53064 558 aa4.29□□□□□ -1.72
SWI1YPL016W HSP82P02829 709 aaKnown RBP4.29□□□□□ -1.72
SWI1YPL016W TPO2P53283 614 aa4.29□□□□□ -1.72
SWI1YPL016W AAD16Q02895 342 aa4.29□□□□□ -1.72
SWI1YPL016W DPL1Q05567 589 aa4.29□□□□□ -1.72
SWI1YPL016W ATG13Q06628 738 aa4.29□□□□□ -1.72
SWI1YPL016W RTT107P38850 1070 aa4.29□□□□□ -1.72
SWI1YPL016W ATG26Q06321 1198 aa4.29□□□□□ -1.72
SWI1YPL016W CFT2Q12102 859 aaPredicted RBP4.29□□□□□ -1.72
SWI1YPL016W TAF13P11747 167 aa4.28□□□□□ -1.72
SWI1YPL016W BEM4P39011 633 aa4.28□□□□□ -1.72
SWI1YPL016W SRC1Q03707 834 aa4.28□□□□□ -1.72
SWI1YPL016W YMR196WQ04336 1088 aa4.28□□□□□ -1.72
SWI1YPL016W TFB4Q12004 338 aa4.28□□□□□ -1.72
SWI1YPL016W RPL17AP05740 184 aaKnown RBP4.28□□□□□ -1.72
SWI1YPL016W STE11P23561 717 aa4.28□□□□□ -1.72
SWI1YPL016W HXT17P53631 564 aa4.28□□□□□ -1.72
SWI1YPL016W GGA1Q06336 557 aa4.28□□□□□ -1.72
SWI1YPL016W DID4P36108 232 aa4.28□□□□□ -1.72
SWI1YPL016W CUS1Q02554 436 aaPredicted RBP4.28□□□□□ -1.72
SWI1YPL016W YPQ2Q06328 317 aa4.28□□□□□ -1.72
SWI1YPL016W UTP4Q06679 776 aaKnown RBP4.28□□□□□ -1.72
SWI1YPL016W SWI3P32591 825 aa4.27□□□□□ -1.73
SWI1YPL016W UGA2P38067 497 aa4.27□□□□□ -1.73
SWI1YPL016W BDH2P39713 417 aa4.27□□□□□ -1.73
SWI1YPL016W ORM1P53224 222 aa4.27□□□□□ -1.73
SWI1YPL016W RIB2Q12362 591 aaKnown RBP4.27□□□□□ -1.73
SWI1YPL016W SFI1Q12369 946 aa4.27□□□□□ -1.73
SWI1YPL016W PRI1P10363 409 aa4.27□□□□□ -1.73
SWI1YPL016W OXP1P28273 1286 aa4.27□□□□□ -1.73
SWI1YPL016W APD1P38281 316 aa4.27□□□□□ -1.73
SWI1YPL016W IES2P40154 320 aa4.27□□□□□ -1.73
SWI1YPL016W MPP10P47083 593 aaKnown RBP4.27□□□□□ -1.73
SWI1YPL016W YOR296WQ08748 1289 aa4.27□□□□□ -1.73
SWI1YPL016W APC11Q12157 165 aa4.27□□□□□ -1.73
SWI1YPL016W CSF1Q12150 2958 aa4.27□□□□□ -1.73
SWI1YPL016W UGA3P26370 528 aa4.27□□□□□ -1.73
SWI1YPL016W MFT1P33441 392 aaKnown RBP4.27□□□□□ -1.73
SWI1YPL016W YFR006WP43590 535 aa4.27□□□□□ -1.73
SWI1YPL016W RCM1P53972 490 aa4.27□□□□□ -1.73
SWI1YPL016W ITT1Q04638 464 aa4.27□□□□□ -1.73
SWI1YPL016W TMA16Q08687 178 aa4.27□□□□□ -1.73
SWI1YPL016W PDR18P53756 1333 aa4.27□□□□□ -1.73
SWI1YPL016W UBP13P38187 747 aa4.27□□□□□ -1.73
SWI1YPL016W FYV10P40492 516 aa4.27□□□□□ -1.73
SWI1YPL016W LAM6Q08001 693 aa4.27□□□□□ -1.73
SWI1YPL016W YOR223WQ12015 292 aa4.27□□□□□ -1.73
SWI1YPL016W RPN12P32496 274 aa4.26□□□□□ -1.73
SWI1YPL016W YME2P32843 850 aa4.26□□□□□ -1.73
SWI1YPL016W SEC66P33754 206 aa4.26□□□□□ -1.73
SWI1YPL016W VPS35P34110 944 aa4.26□□□□□ -1.73
SWI1YPL016W CWH41P53008 833 aa4.26□□□□□ -1.73
SWI1YPL016W PXR1P53335 271 aaPredicted RBP4.26□□□□□ -1.73
SWI1YPL016W YNL247WP53852 767 aaKnown RBP4.26□□□□□ -1.73
SWI1YPL016W SDH5Q08230 162 aa4.26□□□□□ -1.73
SWI1YPL016W HCS1P34243 683 aa4.26□□□□□ -1.73
SWI1YPL016W PCH2P38126 564 aa4.26□□□□□ -1.73
SWI1YPL016W RTG3P38165 486 aa4.26□□□□□ -1.73
SWI1YPL016W HXT13P39924 564 aa4.26□□□□□ -1.73
SWI1YPL016W SEC5P89102 971 aa4.26□□□□□ -1.73
SWI1YPL016W PUS1Q12211 544 aaKnown RBP4.26□□□□□ -1.73
SWI1YPL016W ADR1P07248 1323 aa4.26□□□□□ -1.73
SWI1YPL016W GCD6P32501 712 aaKnown RBP4.26□□□□□ -1.73
SWI1YPL016W ECM32P32644 1121 aaKnown RBP4.26□□□□□ -1.73
SWI1YPL016W MAM1P40065 302 aa4.26□□□□□ -1.73
SWI1YPL016W EPS1P40557 701 aa4.26□□□□□ -1.73
SWI1YPL016W ESBP6P53918 673 aa4.26□□□□□ -1.73
SWI1YPL016W FMP30Q02883 468 aa4.26□□□□□ -1.73
SWI1YPL016W VPS20Q04272 221 aa4.26□□□□□ -1.73
SWI1YPL016W YLR407WQ06070 228 aa4.26□□□□□ -1.73
SWI1YPL016W CDC45Q08032 650 aa4.26□□□□□ -1.73
SWI1YPL016W CLF1Q12309 687 aaPredicted RBP4.26□□□□□ -1.73
SWI1YPL016W SRS2P12954 1174 aa4.25□□□□□ -1.73
SWI1YPL016W IME1P21190 360 aa4.25□□□□□ -1.73
SWI1YPL016W SPR3P41901 512 aa4.25□□□□□ -1.73
SWI1YPL016W YIG1Q08956 461 aa4.25□□□□□ -1.73
SWI1YPL016W GIN4Q12263 1142 aa4.25□□□□□ -1.73
SWI1YPL016W SEC39Q12745 709 aa4.25□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms