RNA–Protein interactions for RNA: YOR132W

VPS17, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS17, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS17YOR132W LSO1Q3E827 93 aa5.6□□□□□ -1.51
VPS17YOR132W FPS1P23900 669 aa5.59□□□□□ -1.51
VPS17YOR132W BOL3P39724 118 aa5.59□□□□□ -1.51
VPS17YOR132W SKP1P52286 194 aa5.59□□□□□ -1.51
VPS17YOR132W SYT1Q06836 1226 aa5.59□□□□□ -1.51
VPS17YOR132W RPC31P17890 251 aa5.59□□□□□ -1.52
VPS17YOR132W CUS1Q02554 436 aaPredicted RBP5.59□□□□□ -1.52
VPS17YOR132W BOI1P38041 980 aaKnown RBP5.57□□□□□ -1.52
VPS17YOR132W JJJ3P47138 172 aa5.57□□□□□ -1.52
VPS17YOR132W APC11Q12157 165 aa5.57□□□□□ -1.52
VPS17YOR132W NCL1P38205 684 aaKnown RBP5.56□□□□□ -1.52
VPS17YOR132W APM2P38700 605 aa5.56□□□□□ -1.52
VPS17YOR132W HAT1Q12341 374 aa5.56□□□□□ -1.52
VPS17YOR132W TRK2P28584 889 aa5.56□□□□□ -1.52
VPS17YOR132W YBR287WP38355 427 aa5.56□□□□□ -1.52
VPS17YOR132W HXT8P40886 569 aa5.56□□□□□ -1.52
VPS17YOR132W ATG1P53104 897 aa5.56□□□□□ -1.52
VPS17YOR132W HEH2Q03281 663 aa5.56□□□□□ -1.52
VPS17YOR132W YOR296WQ08748 1289 aa5.56□□□□□ -1.52
VPS17YOR132W ISW1P38144 1129 aa5.55□□□□□ -1.52
VPS17YOR132W GIP1P38229 639 aa5.55□□□□□ -1.52
VPS17YOR132W GLO3P38682 493 aaKnown RBP5.55□□□□□ -1.52
VPS17YOR132W FIR1P40020 876 aa5.55□□□□□ -1.52
VPS17YOR132W SUT1P53032 299 aaKnown RBP5.55□□□□□ -1.52
VPS17YOR132W QDR1P40475 563 aa5.54□□□□□ -1.52
VPS17YOR132W MSN1P22148 382 aa5.53□□□□□ -1.52
VPS17YOR132W ACF4P47129 309 aa5.53□□□□□ -1.52
VPS17YOR132W MSC7P38694 644 aa5.53□□□□□ -1.52
VPS17YOR132W YNR040WP53736 256 aa5.53□□□□□ -1.52
VPS17YOR132W TY1A-DR2Q03964 440 aaKnown RBP5.53□□□□□ -1.52
VPS17YOR132W YBL113CQ7M4S9 792 aa5.53□□□□□ -1.52
VPS17YOR132W TRL1P09880 827 aaKnown RBP5.52□□□□□ -1.53
VPS17YOR132W RPB10P22139 70 aa5.52□□□□□ -1.53
VPS17YOR132W NAB2P32505 525 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
VPS17YOR132W SMC1P32908 1225 aa5.52□□□□□ -1.53
VPS17YOR132W BSD2P38356 321 aa5.52□□□□□ -1.53
VPS17YOR132W ERP5P38819 212 aa5.52□□□□□ -1.53
VPS17YOR132W ITC1P53125 1264 aa5.51□□□□□ -1.53
VPS17YOR132W GPM1P00950 247 aaKnown RBP5.5□□□□□ -1.53
VPS17YOR132W KTR2P33550 425 aa5.5□□□□□ -1.53
VPS17YOR132W GRS1P38088 690 aaKnown RBP5.5□□□□□ -1.53
VPS17YOR132W SSF1P38789 453 aaPredicted RBP5.5□□□□□ -1.53
VPS17YOR132W NTA1P40354 457 aa5.5□□□□□ -1.53
VPS17YOR132W UFD2P54860 961 aa5.5□□□□□ -1.53
VPS17YOR132W KNS1P32350 737 aaPredicted RBP5.49□□□□□ -1.53
VPS17YOR132W RAD55P38953 406 aa5.49□□□□□ -1.53
VPS17YOR132W YER156CP40093 338 aaKnown RBP5.49□□□□□ -1.53
VPS17YOR132W MDJ2P42834 146 aa5.49□□□□□ -1.53
VPS17YOR132W RGD2P43556 714 aa5.49□□□□□ -1.53
VPS17YOR132W PDC5P16467 563 aaKnown RBP5.48□□□□□ -1.53
VPS17YOR132W YIL165CP40446 119 aa5.48□□□□□ -1.53
VPS17YOR132W PRK1P40494 810 aa5.48□□□□□ -1.53
VPS17YOR132W AI1P03875 834 aa5.47□□□□□ -1.53
VPS17YOR132W IRS4P36115 615 aaKnown RBP5.47□□□□□ -1.53
VPS17YOR132W AIM46P38885 310 aa5.47□□□□□ -1.53
VPS17YOR132W TRS120Q04183 1289 aa5.47□□□□□ -1.53
VPS17YOR132W RSC2Q06488 889 aa5.47□□□□□ -1.53
VPS17YOR132W IDI1P15496 288 aa5.47□□□□□ -1.53
VPS17YOR132W EMG1Q06287 252 aaKnown RBP5.47□□□□□ -1.53
VPS17YOR132W TIF6Q12522 245 aaKnown RBP5.46□□□□□ -1.54
VPS17YOR132W STM1P39015 273 aaKnown RBP5.45□□□□□ -1.54
VPS17YOR132W PSY2P40164 858 aa5.45□□□□□ -1.54
VPS17YOR132W MET1P36150 593 aa5.44□□□□□ -1.54
VPS17YOR132W PPT1P53043 513 aa5.43□□□□□ -1.54
VPS17YOR132W NUT2Q06213 157 aa5.43□□□□□ -1.54
VPS17YOR132W THI72Q08579 599 aa5.43□□□□□ -1.54
VPS17YOR132W SLD2P34252 453 aa5.43□□□□□ -1.54
VPS17YOR132W YHL050CP38721 697 aa5.43□□□□□ -1.54
VPS17YOR132W YHR219WP38900 624 aa5.43□□□□□ -1.54
VPS17YOR132W YNL011CP53980 444 aa5.43□□□□□ -1.54
VPS17YOR132W RSC4Q02206 625 aa5.43□□□□□ -1.54
VPS17YOR132W FRT1Q99332 602 aa5.42□□□□□ -1.54
VPS17YOR132W YNR014WP53719 212 aa5.41□□□□□ -1.54
VPS17YOR132W NSG2P53898 299 aa5.41□□□□□ -1.54
VPS17YOR132W CDC55Q00362 526 aa5.41□□□□□ -1.54
VPS17YOR132W YML020WQ03722 664 aa5.41□□□□□ -1.54
VPS17YOR132W MNL2Q12205 849 aa5.41□□□□□ -1.54
VPS17YOR132W ALG14P38242 237 aa5.4□□□□□ -1.54
VPS17YOR132W BOI2P39969 1040 aa5.4□□□□□ -1.54
VPS17YOR132W YJL181WP46987 611 aa5.4□□□□□ -1.54
VPS17YOR132W MSC6Q08818 692 aaKnown RBP5.4□□□□□ -1.54
VPS17YOR132W MRP10O75012 95 aa5.4□□□□□ -1.55
VPS17YOR132W SEC20P28791 383 aa5.4□□□□□ -1.55
VPS17YOR132W PGM2P37012 569 aaKnown RBP5.4□□□□□ -1.55
VPS17YOR132W ICP55P40051 511 aa5.4□□□□□ -1.55
VPS17YOR132W SBE2P42223 864 aaKnown RBP5.4□□□□□ -1.55
VPS17YOR132W YFL066CP43538 392 aa5.4□□□□□ -1.55
VPS17YOR132W PHM7Q12252 991 aa5.4□□□□□ -1.55
VPS17YOR132W NHA1Q99271 985 aa5.4□□□□□ -1.55
VPS17YOR132W MDJ1P35191 511 aa5.39□□□□□ -1.55
VPS17YOR132W INP51P40559 946 aaKnown RBP5.39□□□□□ -1.55
VPS17YOR132W GIS4Q04233 774 aa5.39□□□□□ -1.55
VPS17YOR132W FUS1P11710 512 aa5.38□□□□□ -1.55
VPS17YOR132W NAR1P23503 491 aaKnown RBP5.38□□□□□ -1.55
VPS17YOR132W ECM2P38241 364 aaKnown RBP5.38□□□□□ -1.55
VPS17YOR132W PPX1P38698 397 aa5.38□□□□□ -1.55
VPS17YOR132W BSC2Q05611 235 aa5.38□□□□□ -1.55
VPS17YOR132W SLP1Q12232 587 aa5.38□□□□□ -1.55
VPS17YOR132W PYC2P32327 1180 aaKnown RBP5.37□□□□□ -1.55
VPS17YOR132W SEN54Q02825 467 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms