RNA–Protein interactions for RNA: YOR018W

ROD1, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeast

Gene ROD1, Length 2,514 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROD1	YOR018W	BUG1	Q12191	341 aa		4.68	□□□□□ -1.66
ROD1	YOR018W	BDP1	P46678	594 aa		4.67	□□□□□ -1.66
ROD1	YOR018W	YJR008W	P47085	338 aa		4.67	□□□□□ -1.66
ROD1	YOR018W	EAF6	P47128	113 aa		4.67	□□□□□ -1.66
ROD1	YOR018W	PSH1	Q12161	406 aa		4.67	□□□□□ -1.66
ROD1	YOR018W	GYP5	Q12344	894 aa		4.67	□□□□□ -1.66
ROD1	YOR018W	RPC31	P17890	251 aa		4.67	□□□□□ -1.66
ROD1	YOR018W	FPR3	P38911	411 aa	Known RBP	4.67	□□□□□ -1.66
ROD1	YOR018W	ATF2	P53296	535 aa		4.67	□□□□□ -1.66
ROD1	YOR018W	NKP2	Q06162	153 aa		4.67	□□□□□ -1.66
ROD1	YOR018W	GCD7	P32502	381 aa	Predicted RBP	4.66	□□□□□ -1.66
ROD1	YOR018W	ALD2	P47771	506 aa		4.66	□□□□□ -1.66
ROD1	YOR018W	RPN7	Q06103	429 aa	Known RBP	4.66	□□□□□ -1.66
ROD1	YOR018W	YOL036W	Q08206	761 aa		4.66	□□□□□ -1.66
ROD1	YOR018W	PMD1	P32634	1753 aa		4.65	□□□□□ -1.66
ROD1	YOR018W	RGR1	P19263	1082 aa		4.65	□□□□□ -1.66
ROD1	YOR018W	SMY1	P32364	656 aa	Known RBP	4.65	□□□□□ -1.66
ROD1	YOR018W	NGR1	P32831	672 aa	Known RBP	4.65	□□□□□ -1.67
ROD1	YOR018W	RAD54	P32863	898 aa		4.65	□□□□□ -1.67
ROD1	YOR018W	ALO1	P54783	526 aa	Known RBP	4.65	□□□□□ -1.67
ROD1	YOR018W	MPH3	P0CE00	602 aa		4.64	□□□□□ -1.67
ROD1	YOR018W	FRD1	P32614	470 aa	Known RBP	4.64	□□□□□ -1.67
ROD1	YOR018W	SET4	P42948	560 aa		4.64	□□□□□ -1.67
ROD1	YOR018W	CWH41	P53008	833 aa		4.64	□□□□□ -1.67
ROD1	YOR018W	HXT17	P53631	564 aa		4.64	□□□□□ -1.67
ROD1	YOR018W	YNL193W	P53870	558 aa		4.64	□□□□□ -1.67
ROD1	YOR018W	SSK22	P25390	1331 aa	Predicted RBP	4.64	□□□□□ -1.67
ROD1	YOR018W	SEC18	P18759	758 aa	Known RBP	4.64	□□□□□ -1.67
ROD1	YOR018W	RPT3	P33298	428 aa	Known RBP	4.64	□□□□□ -1.67
ROD1	YOR018W	BRN1	P38170	754 aa		4.64	□□□□□ -1.67
ROD1	YOR018W	SPL2	P38839	148 aa		4.64	□□□□□ -1.67
ROD1	YOR018W	THI3	Q07471	609 aa		4.64	□□□□□ -1.67
ROD1	YOR018W	UTP10	P42945	1769 aa	Known RBP	4.63	□□□□□ -1.67
ROD1	YOR018W	AI4	P03878	556 aa		4.63	□□□□□ -1.67
ROD1	YOR018W	NOT3	P06102	836 aa	Known RBP	4.63	□□□□□ -1.67
ROD1	YOR018W	UGA2	P38067	497 aa		4.63	□□□□□ -1.67
ROD1	YOR018W	UTP22	P53254	1237 aa	Predicted RBP	4.63	□□□□□ -1.67
ROD1	YOR018W	MRPS35	P53292	345 aa		4.63	□□□□□ -1.67
ROD1	YOR018W	BDF2	Q07442	638 aa		4.63	□□□□□ -1.67
ROD1	YOR018W	HAT1	Q12341	374 aa		4.63	□□□□□ -1.67
ROD1	YOR018W	DCW1	P36091	449 aa		4.63	□□□□□ -1.67
ROD1	YOR018W	HXT13	P39924	564 aa		4.63	□□□□□ -1.67
ROD1	YOR018W	MVP1	P40959	511 aa	Known RBP	4.63	□□□□□ -1.67
ROD1	YOR018W	KIN4	Q01919	800 aa		4.63	□□□□□ -1.67
ROD1	YOR018W	TOS4	Q06266	489 aa		4.63	□□□□□ -1.67
ROD1	YOR018W	YIR042C	P40586	236 aa		4.62	□□□□□ -1.67
ROD1	YOR018W	MDG1	P53885	366 aa		4.62	□□□□□ -1.67
ROD1	YOR018W	ALD3	P54114	506 aa		4.62	□□□□□ -1.67
ROD1	YOR018W	MGM1	P32266	881 aa		4.62	□□□□□ -1.67
ROD1	YOR018W	SLI15	P38283	698 aa		4.62	□□□□□ -1.67
ROD1	YOR018W	RPT4	P53549	437 aa	Known RBP	4.62	□□□□□ -1.67
ROD1	YOR018W	RAT1	Q02792	1006 aa	Known RBP	4.62	□□□□□ -1.67
ROD1	YOR018W	GAS5	Q08193	484 aa		4.62	□□□□□ -1.67
ROD1	YOR018W	ECM21	P38167	1117 aa	Known RBP	4.61	□□□□□ -1.67
ROD1	YOR018W	HAL5	P38970	855 aa	Known RBP	4.61	□□□□□ -1.67
ROD1	YOR018W	YMR147W	P40218	223 aa	Known RBP	4.61	□□□□□ -1.67
ROD1	YOR018W	CSN12	P47130	423 aa		4.61	□□□□□ -1.67
ROD1	YOR018W	MSN5	P52918	1224 aa		4.61	□□□□□ -1.67
ROD1	YOR018W	YGL242C	P53066	181 aa		4.61	□□□□□ -1.67
ROD1	YOR018W	RET1	P22276	1149 aa	Known RBP	4.61	□□□□□ -1.67
ROD1	YOR018W	ICP55	P40051	511 aa		4.61	□□□□□ -1.67
ROD1	YOR018W	GSM1	P42950	618 aa		4.61	□□□□□ -1.67
ROD1	YOR018W	TYW1	Q08960	810 aa	Known RBP	4.61	□□□□□ -1.67
ROD1	YOR018W	PDR18	P53756	1333 aa		4.6	□□□□□ -1.67
ROD1	YOR018W	CDC16	P09798	840 aa		4.6	□□□□□ -1.67
ROD1	YOR018W	ICL1	P28240	557 aa	Predicted RBP	4.6	□□□□□ -1.67
ROD1	YOR018W	NIS1	P53939	407 aa		4.6	□□□□□ -1.67
ROD1	YOR018W	MTC5	Q03897	1148 aa		4.6	□□□□□ -1.67
ROD1	YOR018W	SAS4	Q04003	481 aa		4.6	□□□□□ -1.67
ROD1	YOR018W	SNU66	Q12420	587 aa	Predicted RBP	4.6	□□□□□ -1.67
ROD1	YOR018W	GLO3	P38682	493 aa	Known RBP	4.6	□□□□□ -1.67
ROD1	YOR018W	VPS13	Q07878	3144 aa		4.59	□□□□□ -1.67
ROD1	YOR018W	TOP1	P04786	769 aa		4.59	□□□□□ -1.67
ROD1	YOR018W	KIC1	P38692	1080 aa		4.59	□□□□□ -1.67
ROD1	YOR018W	ATG32	P40458	529 aa		4.59	□□□□□ -1.67
ROD1	YOR018W	IRC4	Q03036	179 aa		4.59	□□□□□ -1.67
ROD1	YOR018W	IRC3	Q06683	689 aa		4.59	□□□□□ -1.67
ROD1	YOR018W	SAC3	P46674	1301 aa		4.59	□□□□□ -1.68
ROD1	YOR018W	VAS1	P07806	1104 aa	Known RBP	4.58	□□□□□ -1.68
ROD1	YOR018W	LCB1	P25045	558 aa	Known RBP	4.58	□□□□□ -1.68
ROD1	YOR018W	KRE2	P27809	442 aa		4.58	□□□□□ -1.68
ROD1	YOR018W	DLD1	P32891	587 aa		4.58	□□□□□ -1.68
ROD1	YOR018W	DAN4	P47179	1161 aa		4.58	□□□□□ -1.68
ROD1	YOR018W	SYF1	Q04048	859 aa	Predicted RBP	4.58	□□□□□ -1.68
ROD1	YOR018W	PGA3	Q12746	312 aa	Known RBP	4.58	□□□□□ -1.68
ROD1	YOR018W	AAP1	P37898	856 aa	Known RBP	4.58	□□□□□ -1.68
ROD1	YOR018W	ERT1	P38140	529 aa		4.58	□□□□□ -1.68
ROD1	YOR018W	OPY1	P38271	328 aa		4.58	□□□□□ -1.68
ROD1	YOR018W	YEL023C	P39992	682 aa		4.58	□□□□□ -1.68
ROD1	YOR018W	BIM1	P40013	344 aa		4.58	□□□□□ -1.68
ROD1	YOR018W	NSG2	P53898	299 aa		4.58	□□□□□ -1.68
ROD1	YOR018W	INM2	Q05533	292 aa		4.58	□□□□□ -1.68
ROD1	YOR018W	RIM20	Q12033	661 aa		4.58	□□□□□ -1.68
ROD1	YOR018W	DPH6	Q12429	685 aa		4.58	□□□□□ -1.68
ROD1	YOR018W	NCB2	Q92317	146 aa		4.58	□□□□□ -1.68
ROD1	YOR018W	ADR1	P07248	1323 aa		4.58	□□□□□ -1.68
ROD1	YOR018W	HTA1	P04911	132 aa	Known RBP	4.57	□□□□□ -1.68
ROD1	YOR018W	HTA2	P04912	132 aa		4.57	□□□□□ -1.68
ROD1	YOR018W	PBY1	P38254	753 aa		4.57	□□□□□ -1.68
ROD1	YOR018W	GTT3	P39996	337 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 63.7 ms