RNA–Protein interactions for RNA: YOR006C

TSR3, Transcript of Protein required for 20S pre-rRNA processing, yeastyeast

Gene TSR3, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR3YOR006C NOP7P53261 605 aaKnown RBP8.79□□□□□ -1
TSR3YOR006C GCR2Q01722 534 aa8.79□□□□□ -1
TSR3YOR006C KRE5P22023 1365 aa8.78□□□□□ -1
TSR3YOR006C FBP26P32604 452 aa8.78□□□□□ -1
TSR3YOR006C RPP2BP02400 110 aaKnown RBP8.77□□□□□ -1.01
TSR3YOR006C RDS2P19541 446 aaKnown RBP8.77□□□□□ -1.01
TSR3YOR006C SOH1P38633 127 aa8.77□□□□□ -1.01
TSR3YOR006C RIA1P53893 1110 aa8.77□□□□□ -1.01
TSR3YOR006C ISR1Q06098 443 aaKnown RBP8.77□□□□□ -1.01
TSR3YOR006C TTI1P36097 1038 aa8.75□□□□□ -1.01
TSR3YOR006C BRE2P43132 505 aa8.75□□□□□ -1.01
TSR3YOR006C ISU1Q03020 165 aa8.75□□□□□ -1.01
TSR3YOR006C RTC1Q08281 1341 aa8.75□□□□□ -1.01
TSR3YOR006C CFT1Q06632 1357 aaKnown RBP8.74□□□□□ -1.01
TSR3YOR006C PEP12P32854 288 aa8.74□□□□□ -1.01
TSR3YOR006C BDS1Q08347 646 aa8.74□□□□□ -1.01
TSR3YOR006C BCK1Q01389 1478 aa8.74□□□□□ -1.01
TSR3YOR006C DFG5Q05031 458 aa8.73□□□□□ -1.01
TSR3YOR006C SRF1Q12516 437 aa8.73□□□□□ -1.01
TSR3YOR006C STE6P12866 1290 aa8.72□□□□□ -1.01
TSR3YOR006C SSA4P22202 642 aaKnown RBP8.72□□□□□ -1.01
TSR3YOR006C CAB1Q04430 367 aa8.72□□□□□ -1.01
TSR3YOR006C ARG82P07250 355 aa8.71□□□□□ -1.02
TSR3YOR006C ALD4P46367 519 aaKnown RBP8.71□□□□□ -1.02
TSR3YOR006C YJR115WP47152 169 aa8.71□□□□□ -1.02
TSR3YOR006C YNR029CP53729 429 aaKnown RBP8.71□□□□□ -1.02
TSR3YOR006C RAD9P14737 1309 aa8.7□□□□□ -1.02
TSR3YOR006C HAL5P38970 855 aaKnown RBP8.69□□□□□ -1.02
TSR3YOR006C PTK2P47116 818 aaKnown RBP8.69□□□□□ -1.02
TSR3YOR006C SPT2P06843 333 aaPredicted RBP8.68□□□□□ -1.02
TSR3YOR006C NAP1P25293 417 aaKnown RBP8.68□□□□□ -1.02
TSR3YOR006C CPS1P27614 576 aa8.68□□□□□ -1.02
TSR3YOR006C UTR2P32623 467 aa8.68□□□□□ -1.02
TSR3YOR006C YFL034WP43564 1073 aa8.68□□□□□ -1.02
TSR3YOR006C TBS1P38114 1094 aa8.67□□□□□ -1.02
TSR3YOR006C HDA3Q06623 655 aa8.67□□□□□ -1.02
TSR3YOR006C MIP1P15801 1254 aa8.66□□□□□ -1.02
TSR3YOR006C DLD3P39976 496 aaKnown RBP8.66□□□□□ -1.02
TSR3YOR006C AAD14P42884 376 aa8.66□□□□□ -1.02
TSR3YOR006C NUP192P47054 1683 aa8.65□□□□□ -1.02
TSR3YOR006C DAT1P13483 248 aaKnown RBP8.65□□□□□ -1.02
TSR3YOR006C TGL4P36165 910 aa8.65□□□□□ -1.02
TSR3YOR006C ESL2P36168 1195 aa8.65□□□□□ -1.02
TSR3YOR006C KTR7P40504 517 aa8.65□□□□□ -1.02
TSR3YOR006C CBC2Q08920 208 aaKnown RBP RIP-Chip data8.65□□□□□ -1.02not detected
TSR3YOR006C NUP85P46673 744 aa8.64□□□□□ -1.03
TSR3YOR006C TSC13Q99190 310 aa8.64□□□□□ -1.03
TSR3YOR006C PHO87P25360 923 aa8.63□□□□□ -1.03
TSR3YOR006C AIM9P40053 627 aaKnown RBP8.63□□□□□ -1.03
TSR3YOR006C GAL2P13181 574 aa8.62□□□□□ -1.03
TSR3YOR006C HAP4P14064 554 aa8.62□□□□□ -1.03
TSR3YOR006C WTM2Q12206 467 aa8.62□□□□□ -1.03
TSR3YOR006C TAF5P38129 798 aa8.61□□□□□ -1.03
TSR3YOR006C SUB2Q07478 446 aaKnown RBP8.61□□□□□ -1.03
TSR3YOR006C LSC2P53312 427 aa8.6□□□□□ -1.03
TSR3YOR006C TAF8Q03750 510 aa8.6□□□□□ -1.03
TSR3YOR006C YLR346CQ06139 101 aa8.6□□□□□ -1.03
TSR3YOR006C PDI1P17967 522 aaKnown RBP8.59□□□□□ -1.03
TSR3YOR006C SLX8P40072 274 aa8.59□□□□□ -1.03
TSR3YOR006C TY3B-IQ7LHG5 1498 aaKnown RBP8.58□□□□□ -1.04
TSR3YOR006C PUP1P25043 261 aa8.58□□□□□ -1.04
TSR3YOR006C ECM23Q02710 187 aa8.58□□□□□ -1.04
TSR3YOR006C GAS4Q08271 471 aa8.58□□□□□ -1.04
TSR3YOR006C ACS2P52910 683 aaKnown RBP8.57□□□□□ -1.04
TSR3YOR006C SWI5P08153 709 aa8.55□□□□□ -1.04
TSR3YOR006C RPS6AP0CX37 236 aaKnown RBP8.55□□□□□ -1.04
TSR3YOR006C RPS6BP0CX38 236 aaPredicted RBP8.55□□□□□ -1.04
TSR3YOR006C NTH2P35172 780 aa8.55□□□□□ -1.04
TSR3YOR006C DLD1P32891 587 aa8.54□□□□□ -1.04
TSR3YOR006C YJR098CP47139 656 aa8.54□□□□□ -1.04
TSR3YOR006C MET22P32179 357 aa8.53□□□□□ -1.04
TSR3YOR006C RCM1P53972 490 aa8.53□□□□□ -1.04
TSR3YOR006C UBP2Q01476 1272 aa8.53□□□□□ -1.04
TSR3YOR006C YDR444WQ04093 687 aa8.53□□□□□ -1.04
TSR3YOR006C NOB1Q08444 459 aaKnown RBP8.53□□□□□ -1.04
TSR3YOR006C UBX7P38349 436 aa8.52□□□□□ -1.05
TSR3YOR006C SUM1P46676 1062 aa8.52□□□□□ -1.05
TSR3YOR006C LCB5Q06147 687 aaKnown RBP8.52□□□□□ -1.05
TSR3YOR006C OPT2Q06593 877 aa8.52□□□□□ -1.05
TSR3YOR006C SSA1P10591 642 aaKnown RBP8.51□□□□□ -1.05
TSR3YOR006C UTP7P40055 554 aaKnown RBP8.51□□□□□ -1.05
TSR3YOR006C VTC4P47075 721 aa8.51□□□□□ -1.05
TSR3YOR006C KIP3P53086 805 aaKnown RBP8.51□□□□□ -1.05
TSR3YOR006C ENT1Q12518 454 aa8.51□□□□□ -1.05
TSR3YOR006C CYT1P07143 309 aa8.5□□□□□ -1.05
TSR3YOR006C SPE2P21182 396 aa8.5□□□□□ -1.05
TSR3YOR006C VAN1P23642 535 aa8.5□□□□□ -1.05
TSR3YOR006C GLY1P37303 387 aaKnown RBP8.5□□□□□ -1.05
TSR3YOR006C MSN5P52918 1224 aa8.5□□□□□ -1.05
TSR3YOR006C ROM1P53046 1155 aa8.5□□□□□ -1.05
TSR3YOR006C UBP1P25037 809 aa8.49□□□□□ -1.05
TSR3YOR006C SCT1P32784 759 aa8.49□□□□□ -1.05
TSR3YOR006C TCB1Q12466 1186 aa8.49□□□□□ -1.05
TSR3YOR006C PRP45P28004 379 aaPredicted RBP8.48□□□□□ -1.05
TSR3YOR006C DAL1P32375 460 aa8.48□□□□□ -1.05
TSR3YOR006C ALA1P40825 983 aaKnown RBP8.48□□□□□ -1.05
TSR3YOR006C YML083CQ04526 418 aa8.48□□□□□ -1.05
TSR3YOR006C MCM1P11746 286 aa8.47□□□□□ -1.05
TSR3YOR006C PPH3P32345 308 aa8.47□□□□□ -1.05
TSR3YOR006C SCW11P53189 542 aa8.47□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms