RNA–Protein interactions for RNA: YNL212W

VID27, Transcript of Cytoplasmic protein of unknown function, yeast

Gene VID27, Length 2,349 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VID27	YNL212W	GRX1	P25373	110 aa	Known RBP	4.68	□□□□□ -1.66
VID27	YNL212W	SSB2	P40150	613 aa	Known RBP	4.68	□□□□□ -1.66
VID27	YNL212W	NST1	P53935	1240 aa		4.68	□□□□□ -1.66
VID27	YNL212W	JIP5	Q06214	492 aa	Predicted RBP	4.68	□□□□□ -1.66
VID27	YNL212W	MSC6	Q08818	692 aa	Known RBP	4.68	□□□□□ -1.66
VID27	YNL212W	LYS2	P07702	1392 aa		4.68	□□□□□ -1.66
VID27	YNL212W	HO	P09932	586 aa		4.68	□□□□□ -1.66
VID27	YNL212W	RTG3	P38165	486 aa		4.68	□□□□□ -1.66
VID27	YNL212W	UBP14	P38237	781 aa	Known RBP	4.68	□□□□□ -1.66
VID27	YNL212W	ART5	P53244	586 aa	Known RBP	4.68	□□□□□ -1.66
VID27	YNL212W	BRE1	Q07457	700 aa	Known RBP	4.68	□□□□□ -1.66
VID27	YNL212W	YOL057W	Q08225	711 aa		4.68	□□□□□ -1.66
VID27	YNL212W	HIF1	Q12373	385 aa		4.68	□□□□□ -1.66
VID27	YNL212W	RPA135	P22138	1203 aa	Known RBP	4.67	□□□□□ -1.66
VID27	YNL212W	FET4	P40988	552 aa		4.67	□□□□□ -1.66
VID27	YNL212W	ALG12	P53730	551 aa		4.67	□□□□□ -1.66
VID27	YNL212W	YNL108C	P53929	270 aa		4.67	□□□□□ -1.66
VID27	YNL212W	MAG2	Q06436	670 aa	Known RBP	4.67	□□□□□ -1.66
VID27	YNL212W	DAP1	Q12091	152 aa		4.67	□□□□□ -1.66
VID27	YNL212W	YDR034W-B	Q6Q5X2	51 aa		4.67	□□□□□ -1.66
VID27	YNL212W	SRP40	P32583	406 aa	Predicted RBP	4.67	□□□□□ -1.66
VID27	YNL212W	OYE2	Q03558	400 aa	Known RBP	4.67	□□□□□ -1.66
VID27	YNL212W	NOP53	Q12080	455 aa	Known RBP	4.67	□□□□□ -1.66
VID27	YNL212W	STB3	Q12427	513 aa		4.67	□□□□□ -1.66
VID27	YNL212W	CIT2	P08679	460 aa		4.66	□□□□□ -1.66
VID27	YNL212W	KTR1	P27810	393 aa	Known RBP	4.66	□□□□□ -1.66
VID27	YNL212W	ERP5	P38819	212 aa		4.66	□□□□□ -1.66
VID27	YNL212W	ULP1	Q02724	621 aa		4.66	□□□□□ -1.66
VID27	YNL212W	AAD16	Q02895	342 aa		4.66	□□□□□ -1.66
VID27	YNL212W	YDL121C	Q07541	149 aa		4.66	□□□□□ -1.66
VID27	YNL212W	YKU70	P32807	602 aa		4.65	□□□□□ -1.66
VID27	YNL212W	SEC8	P32855	1065 aa		4.65	□□□□□ -1.66
VID27	YNL212W	YKL091C	P33324	310 aa	Known RBP	4.65	□□□□□ -1.66
VID27	YNL212W	ISW1	P38144	1129 aa		4.65	□□□□□ -1.66
VID27	YNL212W	RPT2	P40327	437 aa	Known RBP	4.64	□□□□□ -1.67
VID27	YNL212W	NOP2	P40991	618 aa	Known RBP	4.64	□□□□□ -1.67
VID27	YNL212W	ECM16	Q04217	1267 aa	Known RBP	4.64	□□□□□ -1.67
VID27	YNL212W	TEL1	P38110	2787 aa		4.64	□□□□□ -1.67
VID27	YNL212W	ERP2	P39704	215 aa		4.64	□□□□□ -1.67
VID27	YNL212W	VAC8	P39968	578 aa		4.63	□□□□□ -1.67
VID27	YNL212W	VPS62	P53285	467 aa		4.63	□□□□□ -1.67
VID27	YNL212W	YPL034W	Q03083	165 aa		4.63	□□□□□ -1.67
VID27	YNL212W	POB3	Q04636	552 aa	Known RBP	4.63	□□□□□ -1.67
VID27	YNL212W	YLL067C	Q07888	1374 aa		4.63	□□□□□ -1.67
VID27	YNL212W	DCD1	P06773	312 aa		4.63	□□□□□ -1.67
VID27	YNL212W	RAD2	P07276	1031 aa		4.63	□□□□□ -1.67
VID27	YNL212W	MPE1	P35728	441 aa	Known RBP	4.63	□□□□□ -1.67
VID27	YNL212W	TGL4	P36165	910 aa		4.63	□□□□□ -1.67
VID27	YNL212W	YHL050C	P38721	697 aa		4.63	□□□□□ -1.67
VID27	YNL212W	YHR219W	P38900	624 aa		4.63	□□□□□ -1.67
VID27	YNL212W	IOC3	P43596	787 aa		4.63	□□□□□ -1.67
VID27	YNL212W	TMA64	Q04600	565 aa	Known RBP	4.63	□□□□□ -1.67
VID27	YNL212W	YEL077C	Q3E7X8	1277 aa		4.63	□□□□□ -1.67
VID27	YNL212W	ENO1	P00924	437 aa	Known RBP	4.62	□□□□□ -1.67
VID27	YNL212W	VMA4	P22203	233 aa	Known RBP	4.62	□□□□□ -1.67
VID27	YNL212W	GRX4	P32642	244 aa		4.62	□□□□□ -1.67
VID27	YNL212W	BOI2	P39969	1040 aa		4.62	□□□□□ -1.67
VID27	YNL212W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
VID27	YNL212W	GIR2	Q03768	265 aa	Predicted RBP	4.62	□□□□□ -1.67
VID27	YNL212W	SGD1	Q06132	899 aa		4.62	□□□□□ -1.67
VID27	YNL212W	RIX7	Q07844	837 aa	Known RBP	4.62	□□□□□ -1.67
VID27	YNL212W	SPR3	P41901	512 aa		4.62	□□□□□ -1.67
VID27	YNL212W	TSR3	Q12094	313 aa	Known RBP	4.62	□□□□□ -1.67
VID27	YNL212W	TUS1	Q06412	1307 aa		4.61	□□□□□ -1.67
VID27	YNL212W	XKS1	P42826	600 aa		4.61	□□□□□ -1.67
VID27	YNL212W	KAR1	P11927	433 aa		4.61	□□□□□ -1.67
VID27	YNL212W	SUP45	P12385	437 aa	Known RBP	4.61	□□□□□ -1.67
VID27	YNL212W	SMY1	P32364	656 aa	Known RBP	4.61	□□□□□ -1.67
VID27	YNL212W	PSF2	P40359	213 aa		4.61	□□□□□ -1.67
VID27	YNL212W	PRY3	P47033	881 aa		4.61	□□□□□ -1.67
VID27	YNL212W	YGR117C	P53270	476 aa		4.61	□□□□□ -1.67
VID27	YNL212W	WHI5	Q12416	295 aa		4.61	□□□□□ -1.67
VID27	YNL212W	FLO1	P32768	1537 aa		4.6	□□□□□ -1.67
VID27	YNL212W	AFG2	P32794	780 aa		4.6	□□□□□ -1.67
VID27	YNL212W	EDS1	P38073	919 aa		4.6	□□□□□ -1.67
VID27	YNL212W	CWC22	P53333	577 aa	Known RBP	4.6	□□□□□ -1.67
VID27	YNL212W	CAB1	Q04430	367 aa		4.6	□□□□□ -1.67
VID27	YNL212W	GRS1	P38088	690 aa	Known RBP	4.6	□□□□□ -1.67
VID27	YNL212W	PRP43	P53131	767 aa	Known RBP	4.6	□□□□□ -1.67
VID27	YNL212W	DNM1	P54861	757 aa		4.6	□□□□□ -1.67
VID27	YNL212W	DIB1	Q06819	143 aa	Predicted RBP	4.6	□□□□□ -1.67
VID27	YNL212W	ICL1	P28240	557 aa	Predicted RBP	4.59	□□□□□ -1.67
VID27	YNL212W	PSE1	P32337	1089 aa	Known RBP	4.59	□□□□□ -1.67
VID27	YNL212W	CSE4	P36012	229 aa		4.59	□□□□□ -1.67
VID27	YNL212W	GRX7	P38068	203 aa		4.59	□□□□□ -1.67
VID27	YNL212W	KTR4	P38131	464 aa		4.59	□□□□□ -1.67
VID27	YNL212W	PPX1	P38698	397 aa		4.59	□□□□□ -1.67
VID27	YNL212W	NOC2	P39744	710 aa	Known RBP	4.59	□□□□□ -1.67
VID27	YNL212W	ALD6	P54115	500 aa	Known RBP	4.59	□□□□□ -1.67
VID27	YNL212W	KAR5	Q04746	504 aa		4.59	□□□□□ -1.67
VID27	YNL212W	MRX10	Q05648	414 aa		4.59	□□□□□ -1.67
VID27	YNL212W	RAV1	P47104	1357 aa		4.59	□□□□□ -1.68
VID27	YNL212W	ENO2	P00925	437 aa	Known RBP	4.58	□□□□□ -1.68
VID27	YNL212W	TRL1	P09880	827 aa	Known RBP	4.58	□□□□□ -1.68
VID27	YNL212W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
VID27	YNL212W	IXR1	P33417	597 aa		4.58	□□□□□ -1.68
VID27	YNL212W	MDJ2	P42834	146 aa		4.58	□□□□□ -1.68
VID27	YNL212W	YDR090C	Q03193	310 aa		4.58	□□□□□ -1.68
VID27	YNL212W	YGR161W-C	Q3E744	92 aa		4.58	□□□□□ -1.68
VID27	YNL212W	RPS0A	P32905	252 aa	Known RBP	4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms