RNA–Protein interactions for RNA: YMR162C

DNF3, Transcript of Trans-golgi network aminophospholipid translocase (flippase), yeastyeast

Gene DNF3, Length 4,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNF3YMR162C ETP1P38748 585 aaKnown RBP2□□□□□ -2.09
DNF3YMR162C SPR3P41901 512 aa2□□□□□ -2.09
DNF3YMR162C SRC1Q03707 834 aa2□□□□□ -2.09
DNF3YMR162C UTP13Q05946 817 aaKnown RBP2□□□□□ -2.09
DNF3YMR162C ARP7Q12406 477 aa2□□□□□ -2.09
DNF3YMR162C FUS1P11710 512 aa2□□□□□ -2.09
DNF3YMR162C MLS1P30952 554 aa2□□□□□ -2.09
DNF3YMR162C RPN1P38764 993 aaKnown RBP2□□□□□ -2.09
DNF3YMR162C NMD2P38798 1089 aaKnown RBP2□□□□□ -2.09
DNF3YMR162C BUD27P43573 796 aaKnown RBP RIP-Chip data2□□□□□ -2.09not detected
DNF3YMR162C JJJ2P46997 583 aa2□□□□□ -2.09
DNF3YMR162C KIP3P53086 805 aaKnown RBP2□□□□□ -2.09
DNF3YMR162C LSB1P53281 241 aa2□□□□□ -2.09
DNF3YMR162C ATG20Q07528 640 aa2□□□□□ -2.09
DNF3YMR162C SEC21P32074 935 aaKnown RBP1.99□□□□□ -2.09
DNF3YMR162C YKR075CP36155 307 aa1.99□□□□□ -2.09
DNF3YMR162C TOS1P38288 455 aa1.99□□□□□ -2.09
DNF3YMR162C STM1P39015 273 aaKnown RBP1.99□□□□□ -2.09
DNF3YMR162C SAH1P39954 449 aaKnown RBP1.99□□□□□ -2.09
DNF3YMR162C COP1P53622 1201 aaKnown RBP1.99□□□□□ -2.09
DNF3YMR162C JJJ1P53863 590 aa1.99□□□□□ -2.09
DNF3YMR162C ERO1Q03103 563 aa1.99□□□□□ -2.09
DNF3YMR162C UGA3P26370 528 aa1.99□□□□□ -2.09
DNF3YMR162C CBF2P32504 956 aa1.99□□□□□ -2.09
DNF3YMR162C SAS3P34218 831 aa1.99□□□□□ -2.09
DNF3YMR162C PTC3P34221 468 aaKnown RBP1.99□□□□□ -2.09
DNF3YMR162C RTG3P38165 486 aa1.99□□□□□ -2.09
DNF3YMR162C ATG3P40344 310 aa1.99□□□□□ -2.09
DNF3YMR162C SHQ1P40486 507 aaPredicted RBP1.99□□□□□ -2.09
DNF3YMR162C BUB1P41695 1021 aaKnown RBP RIP-Chip data1.99□□□□□ -2.09not detected
DNF3YMR162C HXT15P54854 567 aa1.99□□□□□ -2.09
DNF3YMR162C YDR338CQ05497 695 aa1.99□□□□□ -2.09
DNF3YMR162C NBL1Q3E7Y6 73 aa1.99□□□□□ -2.09
DNF3YMR162C VID27P40157 782 aa1.99□□□□□ -2.09
DNF3YMR162C RPS0BP46654 252 aaKnown RBP1.99□□□□□ -2.09
DNF3YMR162C YJR107WP47145 328 aa1.99□□□□□ -2.09
DNF3YMR162C MRK1P50873 501 aa1.99□□□□□ -2.09
DNF3YMR162C HEH2Q03281 663 aa1.99□□□□□ -2.09
DNF3YMR162C CLU1Q03690 1277 aaKnown RBP1.99□□□□□ -2.09
DNF3YMR162C ACK1Q07622 623 aaPredicted RBP1.99□□□□□ -2.09
DNF3YMR162C SSM4P40318 1319 aa1.99□□□□□ -2.09
DNF3YMR162C ERG12P07277 443 aa1.99□□□□□ -2.09
DNF3YMR162C GGA2P38817 585 aaKnown RBP1.99□□□□□ -2.09
DNF3YMR162C PIP2P52960 996 aa1.99□□□□□ -2.09
DNF3YMR162C SGD1Q06132 899 aa1.99□□□□□ -2.09
DNF3YMR162C VPS5Q92331 675 aa1.99□□□□□ -2.09
DNF3YMR162C CET1O13297 549 aaPredicted RBP1.98□□□□□ -2.09
DNF3YMR162C STE11P23561 717 aa1.98□□□□□ -2.09
DNF3YMR162C PSE1P32337 1089 aaKnown RBP1.98□□□□□ -2.09
DNF3YMR162C GEF1P37020 779 aa1.98□□□□□ -2.09
DNF3YMR162C ERC1P38767 581 aa1.98□□□□□ -2.09
DNF3YMR162C SIZ1Q04195 904 aa1.98□□□□□ -2.09
DNF3YMR162C MMR1Q06324 491 aa1.98□□□□□ -2.09
DNF3YMR162C GRE2Q12068 342 aaKnown RBP1.98□□□□□ -2.09
DNF3YMR162C MAM3Q12296 706 aa1.98□□□□□ -2.09
DNF3YMR162C DPS1P04802 557 aaKnown RBP1.98□□□□□ -2.09
DNF3YMR162C PIF1P07271 859 aa1.98□□□□□ -2.09
DNF3YMR162C YBR238CP38330 731 aaKnown RBP1.98□□□□□ -2.09
DNF3YMR162C NMD3P38861 518 aaKnown RBP1.98□□□□□ -2.09
DNF3YMR162C MAM1P40065 302 aa1.98□□□□□ -2.09
DNF3YMR162C YNR014WP53719 212 aa1.98□□□□□ -2.09
DNF3YMR162C YDL073WQ07454 984 aa1.98□□□□□ -2.09
DNF3YMR162C PER1P25625 357 aa1.98□□□□□ -2.09
DNF3YMR162C SYN8P31377 255 aa1.98□□□□□ -2.09
DNF3YMR162C PEA2P40091 420 aa1.98□□□□□ -2.09
DNF3YMR162C EAF6P47128 113 aa1.98□□□□□ -2.09
DNF3YMR162C MSB3P48566 633 aaPredicted RBP1.98□□□□□ -2.09
DNF3YMR162C BDF2Q07442 638 aa1.98□□□□□ -2.09
DNF3YMR162C TUM1Q08686 304 aaKnown RBP1.98□□□□□ -2.09
DNF3YMR162C NUP145P49687 1317 aa1.98□□□□□ -2.09
DNF3YMR162C YEL1P34225 687 aa1.98□□□□□ -2.09
DNF3YMR162C SLN1P39928 1220 aaPredicted RBP1.98□□□□□ -2.09
DNF3YMR162C YIL089WP40500 205 aa1.98□□□□□ -2.09
DNF3YMR162C VMA13P41807 478 aaKnown RBP1.98□□□□□ -2.09
DNF3YMR162C YRB30P53107 440 aaPredicted RBP1.98□□□□□ -2.09
DNF3YMR162C RMD1Q03441 430 aa1.98□□□□□ -2.09
DNF3YMR162C GIR2Q03768 265 aaPredicted RBP1.98□□□□□ -2.09
DNF3YMR162C VPS64Q03944 604 aa1.98□□□□□ -2.09
DNF3YMR162C HFI1Q12060 488 aa1.98□□□□□ -2.09
DNF3YMR162C GIN4Q12263 1142 aa1.98□□□□□ -2.09
DNF3YMR162C APC1P53886 1748 aa1.97□□□□□ -2.09
DNF3YMR162C FKS3Q04952 1785 aa1.97□□□□□ -2.09
DNF3YMR162C COQ8P27697 501 aa1.97□□□□□ -2.09
DNF3YMR162C YJU2P28320 278 aaPredicted RBP1.97□□□□□ -2.09
DNF3YMR162C DLD1P32891 587 aa1.97□□□□□ -2.09
DNF3YMR162C MNN4P36044 1178 aa1.97□□□□□ -2.09
DNF3YMR162C PPX1P38698 397 aa1.97□□□□□ -2.09
DNF3YMR162C RSM25P40496 264 aa1.97□□□□□ -2.09
DNF3YMR162C PIB2P53191 635 aa1.97□□□□□ -2.09
DNF3YMR162C CNM67P53865 581 aaKnown RBP1.97□□□□□ -2.09
DNF3YMR162C CSM3Q04659 317 aa1.97□□□□□ -2.09
DNF3YMR162C SUB2Q07478 446 aaKnown RBP1.97□□□□□ -2.09
DNF3YMR162C NOC3Q07896 663 aaPredicted RBP1.97□□□□□ -2.09
DNF3YMR162C TRP2P00899 507 aaKnown RBP1.97□□□□□ -2.09
DNF3YMR162C KCC4P25389 1037 aa1.97□□□□□ -2.09
DNF3YMR162C ISW1P38144 1129 aa1.97□□□□□ -2.09
DNF3YMR162C SGM1P47166 707 aa1.97□□□□□ -2.09
DNF3YMR162C HGH1P48362 394 aaKnown RBP1.97□□□□□ -2.09
DNF3YMR162C PUS4P48567 403 aaKnown RBP1.97□□□□□ -2.09
DNF3YMR162C FAP1P53971 965 aa1.97□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms